Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g45166_MAGBIO Magnolia biondii HOM05D000528 ORTHO05D241626 4.5e-120 434.5 203 100.0
HPP92_002719 Vanilla planifolia HOM05D000528 ORTHO05D001569 1.4e-20 104.0 184 42.9
MBI01_g11792_MAGBIO Magnolia biondii HOM05D000528 ORTHO05D001569 4.1e-20 102.4 212 42.0
Zm00001eb138130 Zea mays HOM05D000528 ORTHO05D001569 2.0e-19 100.1 185 42.2
Os04g0117300 Oryza sativa ssp. japonica HOM05D000528 ORTHO05D001569 5.9e-19 98.6 206 40.3
Rhsim03G0244100 Rhododendron simsii HOM05D000528 ORTHO05D001569 7.7e-19 98.2 184 42.9
vmacro06203 Vaccinium macrocarpon HOM05D000528 ORTHO05D001569 2.9e-18 96.3 184 41.3
Actinidia32687 Actinidia chinensis HOM05D000528 ORTHO05D001569 3.2e-17 92.8 184 42.4
Dinv41589 Davidia involucrata HOM05D000528 ORTHO05D001569 3.2e-17 92.8 203 38.9
PGR102G3236 Punica granatum HOM05D000528 ORTHO05D001569 9.4e-17 91.3 206 38.3
Gohir.A05G022300 Gossypium hirsutum HOM05D000528 ORTHO05D001569 1.2e-16 90.9 192 38.5
THA.LOC104799071 Tarenaya hassleriana HOM05D000528 ORTHO05D001569 2.7e-16 89.7 189 37.0
CSS0010183 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D001569 6.1e-16 88.6 184 38.0
CiPaw.03G233900 Carya illinoinensis HOM05D000528 ORTHO05D001569 6.1e-16 88.6 184 40.2
Duzib150G0943 Durio zibethinus HOM05D000528 ORTHO05D001569 6.1e-16 88.6 188 38.3
FAN26G0098 Fragaria x ananassa HOM05D000528 ORTHO05D001569 7.9e-16 88.2 199 37.2
FAN26G2632 Fragaria x ananassa HOM05D000528 ORTHO05D001569 7.9e-16 88.2 199 37.2
CANSAT21G0716 Cannabis sativa HOM05D000528 ORTHO05D000001 1.0e-15 87.8 200 34.0
Gorai.009G023900 Gossypium raimondii HOM05D000528 ORTHO05D001569 1.0e-15 87.8 188 39.4
Cpa.g.sc23.116 Carica papaya HOM05D000528 ORTHO05D001569 1.4e-15 87.4 179 36.9
QL03p049169 Quercus lobata HOM05D000528 ORTHO05D001569 1.4e-15 87.4 184 39.7
CSS0031605 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D001569 2.3e-15 86.7 184 38.0
TWI34G1986 Tripterygium wilfordii HOM05D000528 ORTHO05D001569 2.3e-15 86.7 181 37.6
TAR362G0147 Trochodendron aralioides HOM05D000528 ORTHO05D001569 2.3e-15 86.7 199 37.7
Thecc.09G112700 Theobroma cacao HOM05D000528 ORTHO05D001569 5.1e-15 85.5 188 38.3
MELO3C004551.2 Cucumis melo HOM05D000528 ORTHO05D001569 6.7e-15 85.1 188 36.7
CsaV3_2G002330 Cucumis sativus L. HOM05D000528 ORTHO05D001569 6.7e-15 85.1 188 37.8
MD15G1187700 Malus domestica HOM05D000528 ORTHO05D001569 6.7e-15 85.1 203 36.5
Eucgr.C03862 Eucalyptus grandis HOM05D000528 ORTHO05D001569 8.8e-15 84.7 206 36.4
EL10Ac8g18513 Beta vulgaris HOM05D000528 ORTHO05D001569 1.5e-14 84.0 200 35.5
Cfa003276 Carpinus fangiana HOM05D000528 ORTHO05D001569 1.5e-14 84.0 183 37.7
MD02G1050300 Malus domestica HOM05D000528 ORTHO05D001569 1.5e-14 84.0 184 37.0
Manes.03G019000 Manihot esculenta HOM05D000528 ORTHO05D001569 1.5e-14 84.0 193 36.3
Haze_25700 Corylus avellana HOM05D000528 ORTHO05D001569 2.0e-14 83.6 192 39.1
FvH4_1g05140 Fragaria vesca HOM05D000528 ORTHO05D001569 2.0e-14 83.6 179 37.4
Gohir.D05G023800 Gossypium hirsutum HOM05D000528 ORTHO05D001569 2.0e-14 83.6 188 38.8
Prupe.7G228800 Prunus persica HOM05D000528 ORTHO05D001569 2.0e-14 83.6 184 38.0
Atru.BG.16.p Acer truncatum HOM05D000528 ORTHO05D001569 2.5e-14 83.2 188 36.7
Atru.chr7.1325 Acer truncatum HOM05D000528 ORTHO05D001569 2.5e-14 83.2 188 36.7
Duzib168G2182 Durio zibethinus HOM05D000528 ORTHO05D001569 2.5e-14 83.2 184 38.6
Sc18g0001130 Simmondsia chinensis HOM05D000528 ORTHO05D001569 2.5e-14 83.2 184 38.0
GSVIVG01015408001 Vitis vinifera HOM05D000528 ORTHO05D001569 3.3e-14 82.8 203 38.4
ClCG11G002530 Citrullus lanatus HOM05D000528 ORTHO05D001569 4.3e-14 82.4 188 36.2
FAN19G0743 Fragaria x ananassa HOM05D000528 ORTHO05D001569 4.3e-14 82.4 179 36.9
Peaxi162Scf00560g00025 Petunia axillaris HOM05D000528 ORTHO05D001569 4.3e-14 82.4 189 38.1
Solyc03g070470.1 Solanum lycopersicum HOM05D000528 ORTHO05D001569 4.3e-14 82.4 190 37.9
Sopen03g019250 Solanum pennellii HOM05D000528 ORTHO05D001569 4.3e-14 82.4 190 37.9
Ciclev10010624m.g Citrus clementina HOM05D000528 ORTHO05D001569 5.7e-14 82.0 188 36.7
HanXRQChr12g0355451 Helianthus annuus HOM05D000528 ORTHO05D001569 7.4e-14 81.6 181 36.5
PGSC0003DMG400007651 Solanum tuberosum HOM05D000528 ORTHO05D001569 7.4e-14 81.6 190 37.9
Thhalv10012445m.g Eutrema salsugineum HOM05D000528 ORTHO05D001569 1.7e-13 80.5 188 35.1
Aqoxy7G03760 Aquilegia oxysepala HOM05D000528 ORTHO05D001569 2.2e-13 80.1 192 38.0
Nn1g00121 Nelumbo nucifera HOM05D000528 ORTHO05D001569 4.8e-13 79.0 187 36.9
COL.COLO4_34896 Corchorus olitorius HOM05D000528 ORTHO05D001569 6.3e-13 78.6 188 34.6
PSO017G0622 Papaver somniferum HOM05D000528 ORTHO05D001569 8.2e-13 78.2 215 35.3
PSO675G2635 Papaver somniferum HOM05D000528 ORTHO05D001569 8.2e-13 78.2 215 35.8
SHI26919 Sapria himalayana HOM05D000528 ORTHO05D001569 8.2e-13 78.2 185 35.1
Nitab4.5_0000413g0170 Nicotiana tabacum HOM05D000528 ORTHO05D001569 1.1e-12 77.8 191 35.6
Sed0002065 Sechium edule HOM05D000528 ORTHO05D001569 1.1e-12 77.8 184 34.8
CAN.G184.57 Capsicum annuum HOM05D000528 ORTHO05D001569 1.4e-12 77.4 193 35.8
CARHR064710 Cardamine hirsuta HOM05D000528 ORTHO05D001569 1.8e-12 77.0 188 35.6
Potri.018G075300 Populus trichocarpa HOM05D000528 ORTHO05D001569 1.8e-12 77.0 180 33.9
Sp6g24780 Schrenkiella parvula HOM05D000528 ORTHO05D001569 1.8e-12 77.0 188 35.1
Carub.0006s1796 Capsella rubella HOM05D000528 ORTHO05D001569 2.4e-12 76.6 189 34.9
Nitab4.5_0001572g0010 Nicotiana tabacum HOM05D000528 ORTHO05D001569 2.4e-12 76.6 188 36.7
Lj7A647T56 Lonicera japonica HOM05D000528 ORTHO05D001569 3.1e-12 76.3 208 33.2
Aa31LG1G8700 Aethionema arabicum HOM05D000528 ORTHO05D001569 4.1e-12 75.9 182 36.3
ECA234G4174 Erigeron canadensis HOM05D000528 ORTHO05D001569 4.1e-12 75.9 175 36.0
AUR62011009 Chenopodium quinoa HOM05D000528 ORTHO05D001569 5.3e-12 75.5 202 36.1
AUR62021520 Chenopodium quinoa HOM05D000528 ORTHO05D001569 5.3e-12 75.5 196 36.2
Cc06_g09520 Coffea canephora HOM05D000528 ORTHO05D001569 6.9e-12 75.1 193 34.7
Sabra18G0066200 Salix brachista HOM05D000528 ORTHO05D001569 6.9e-12 75.1 202 33.7
TPR.G30576 Trifolium pratense HOM05D000528 ORTHO05D001569 9.1e-12 74.7 177 35.0
AL6G31120 Arabidopsis lyrata HOM05D000528 ORTHO05D001569 1.2e-11 74.3 189 33.3
AT5G19610 Arabidopsis thaliana HOM05D000528 ORTHO05D001569 1.2e-11 74.3 189 33.9
BcaC04g24224 Brassica carinata HOM05D000528 ORTHO05D001569 1.2e-11 74.3 188 33.5
A10p20100 Brassica napus HOM05D000528 ORTHO05D001569 1.2e-11 74.3 188 33.5
C09p56570 Brassica napus HOM05D000528 ORTHO05D001569 1.2e-11 74.3 188 33.5
BolC9t58522H Brassica oleracea HOM05D000528 ORTHO05D001569 1.2e-11 74.3 188 33.5
BraA10t44084Z Brassica rapa HOM05D000528 ORTHO05D001569 1.2e-11 74.3 188 33.5
DCAR_028721 Daucus carota HOM05D000528 ORTHO05D001569 1.5e-11 73.9 203 34.0
Migut.I00641 Erythranthe guttata HOM05D000528 ORTHO05D001569 1.5e-11 73.9 210 32.4
Medtr6g086260 Medicago truncatula HOM05D000528 ORTHO05D001569 2.6e-11 73.2 190 33.2
Phvul.004G161900 Phaseolus vulgaris HOM05D000528 ORTHO05D001569 2.6e-11 73.2 200 33.5
Lalb_Chr14g0371441 Lupinus albus HOM05D000528 ORTHO05D001569 3.4e-11 72.8 182 35.2
VMungo0464G1860 Vigna mungo HOM05D000528 ORTHO05D001569 3.4e-11 72.8 201 33.8
Ca_25521_v3 Cicer arietinum L. HOM05D000528 ORTHO05D001569 5.9e-11 72.0 175 33.7
Lsat_1_v5_gn_5_100720 Lactuca sativa HOM05D000528 ORTHO05D001569 5.9e-11 72.0 180 33.9
Glyma.09G189000 Glycine max HOM05D000528 ORTHO05D001569 7.7e-11 71.6 176 35.8
SGA_v2.0_scaffold37G14653 Striga asiatica HOM05D000528 ORTHO05D001569 7.7e-11 71.6 186 33.9
Psat1g040480 Pisum sativum HOM05D000528 ORTHO05D001569 6.5e-10 68.6 182 33.5
SalBow7G0484 Salvia bowleyana HOM05D000528 ORTHO05D001569 6.5e-10 68.6 199 31.7
Lj2g0020151 Lotus japonicus HOM05D000528 ORTHO05D001569 1.9e-09 67.0 180 34.4
unitig_0.g1091 Utricularia gibba HOM05D000528 ORTHO05D001569 4.2e-09 65.9 184 31.5
TAR362G0862 Trochodendron aralioides HOM05D000528 ORTHO05D001569 3.6e-08 62.8 53 58.5
Oeu051545.1 Olea europaea HOM05D000528 ORTHO05D001569 3.0e-07 59.7 95 42.1
RcHm_v2.0_Chr2g0090781 Rosa chinensis HOM05D000528 ORTHO05D001569 8.8e-07 58.2 53 56.6
arahy.Tifrunner.gnm1.ann1.35ZMHK Arachis hypogaea HOM05D000528 ORTHO05D001569 1.5e-06 57.4 181 33.1
arahy.Tifrunner.gnm1.ann1.CV2QSX Arachis hypogaea HOM05D000528 ORTHO05D001569 5.7e-06 55.5 187 32.1


User provided reference genes

Program Settings