Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 3.2e-71 271.6 130 100.0
MBI01_g38428_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D009730 1.7e-40 169.5 81 100.0
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 2.9e-27 125.6 105 61.9
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 1.4e-26 123.2 133 53.4
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 2.0e-20 102.8 106 54.7
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 2.0e-20 102.8 103 56.3
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 6.4e-19 97.8 111 51.4
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 8.4e-19 97.4 123 48.8
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 3.2e-18 95.5 118 49.2
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 5.4e-18 94.7 105 53.3
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.2e-17 93.6 104 51.0
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 1.6e-17 93.2 104 52.9
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 3.5e-17 92.0 117 49.6
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 4.6e-17 91.7 123 46.3
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 6.0e-17 91.3 123 46.3
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 7.8e-17 90.9 127 48.0
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.3e-16 90.1 110 46.4
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 1.7e-16 89.7 130 47.7
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 8.7e-16 87.4 98 50.0
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.1e-15 87.0 81 54.3
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 1.9e-15 86.3 106 53.8
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.3e-15 85.5 90 53.3
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.3e-15 85.5 90 53.3
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 9.6e-15 84.0 105 50.5
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.6e-14 83.2 90 52.2
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 1.6e-14 83.2 116 44.8
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 1.6e-14 83.2 106 47.2
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 2.1e-14 82.8 108 48.1
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 2.1e-14 82.8 119 48.7
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 4.8e-14 81.6 94 47.9
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 4.8e-14 81.6 104 47.1
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 8.1e-14 80.9 110 45.5
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 1.4e-13 80.1 104 50.0
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 1.4e-13 80.1 77 53.2
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 1.4e-13 80.1 66 57.6
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.8e-13 79.7 105 45.7
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.8e-13 79.7 67 62.7
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 1.8e-13 79.7 77 53.2
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 2.4e-13 79.3 67 61.2
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 2.4e-13 79.3 67 62.7
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 2.4e-13 79.3 67 62.7
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 3.1e-13 79.0 46 76.1
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 4.0e-13 78.6 103 46.6
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 4.0e-13 78.6 99 44.4
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 5.3e-13 78.2 132 44.7
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 5.3e-13 78.2 127 45.7
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 6.9e-13 77.8 89 51.7
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.5e-12 76.6 102 45.1
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 1.5e-12 76.6 56 71.4
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 1.5e-12 76.6 125 40.0
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 2.0e-12 76.3 49 73.5
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 3.4e-12 75.5 131 44.3
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 3.4e-12 75.5 100 48.0
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 5.8e-12 74.7 66 50.0
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 7.6e-12 74.3 109 43.1
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 7.6e-12 74.3 70 50.0
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 1.7e-11 73.2 66 60.6
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 2.2e-11 72.8 97 43.3
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 2.9e-11 72.4 121 39.7
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 8.4e-11 70.9 44 65.9
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 8.4e-11 70.9 96 50.0
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 1.1e-10 70.5 99 46.5
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 2.4e-10 69.3 70 50.0
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 3.2e-10 68.9 66 48.5
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 4.2e-10 68.6 71 50.7
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 5.4e-10 68.2 47 61.7
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 9.3e-10 67.4 95 45.3
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 1.2e-09 67.0 111 42.3
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 3.5e-09 65.5 128 41.4
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 4.6e-09 65.1 111 39.6
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 4.6e-09 65.1 96 42.7
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 4.6e-09 65.1 66 50.0
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 1.7e-08 63.2 45 60.0
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 2.3e-08 62.8 78 44.9
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 2.3e-08 62.8 93 40.9
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 1.1e-07 60.5 104 41.3
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 3.3e-07 58.9 107 38.3
C01p48660 Brassica napus HOM05D000771 ORTHO05D001963 7.3e-07 57.8 71 43.7
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 1.3e-06 57.0 78 42.3
Carub.0001s4151 Capsella rubella HOM05D007722 ORTHO05D009730 1.3e-06 57.0 115 40.9
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.6e-06 56.6 106 38.7
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 3.6e-06 55.5 47 51.1
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 3.6e-06 55.5 47 51.1
BolC1t04820H Brassica oleracea HOM05D000771 ORTHO05D001963 4.8e-06 55.1 71 42.3


User provided reference genes

Program Settings