Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 2.4e-78 295.4 150 100.0
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 3.1e-41 172.2 140 63.6
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 5.3e-41 171.4 140 67.9
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 6.9e-41 171.0 138 65.9
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 3.4e-40 168.7 144 65.3
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 4.5e-40 168.3 140 66.4
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 5.8e-40 167.9 136 63.2
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 1.3e-39 166.8 138 66.7
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 1.3e-39 166.8 139 67.6
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 1.7e-39 166.4 137 63.5
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 2.2e-39 166.0 138 66.7
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 2.2e-39 166.0 150 58.0
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 2.9e-39 165.6 146 61.0
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 2.9e-39 165.6 138 60.9
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 3.8e-39 165.2 136 63.2
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 3.8e-39 165.2 136 64.7
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 6.4e-39 164.5 145 65.5
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 1.9e-38 162.9 147 59.9
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 3.2e-38 162.2 140 65.0
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 5.4e-38 161.4 138 64.5
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 5.4e-38 161.4 140 61.4
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 5.4e-38 161.4 138 62.3
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 1.2e-37 160.2 152 63.2
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 1.2e-37 160.2 147 59.2
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 1.6e-37 159.8 138 64.5
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.6e-37 159.8 140 60.7
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.6e-37 159.8 140 60.7
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 1.6e-37 159.8 139 61.2
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 2.7e-37 159.1 141 63.1
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 2.7e-37 159.1 142 59.9
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 3.5e-37 158.7 142 57.7
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 4.6e-37 158.3 142 57.7
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 4.6e-37 158.3 142 59.9
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 6.0e-37 157.9 140 57.1
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 1.0e-36 157.1 137 65.0
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 1.0e-36 157.1 142 59.9
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 2.3e-36 156.0 151 60.3
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 3.0e-36 155.6 150 60.0
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 8.7e-36 154.1 152 58.6
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 1.5e-35 153.3 141 55.3
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 1.5e-35 153.3 142 58.5
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 4.3e-35 151.8 152 57.2
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 7.4e-35 151.0 151 52.3
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.4e-35 151.0 152 56.6
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 9.6e-35 150.6 152 57.2
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 2.1e-34 149.4 140 62.1
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 4.8e-34 148.3 150 54.7
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 4.8e-34 148.3 150 58.0
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 1.1e-33 147.1 137 57.7
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 1.8e-33 146.4 142 59.9
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 4.0e-33 145.2 152 53.9
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.2e-32 143.7 122 63.1
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 2.0e-32 142.9 99 69.7
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 3.4e-32 142.1 127 60.6
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 2.9e-31 139.0 137 58.4
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 6.4e-31 137.9 137 54.7
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 6.4e-31 137.9 138 52.9
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 8.4e-31 137.5 98 71.4
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 1.1e-30 137.1 145 53.8
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 2.4e-30 136.0 112 64.3
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 1.2e-29 133.7 142 56.3
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 2.1e-29 132.9 140 58.6
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 7.9e-29 131.0 135 54.8
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 1.8e-28 129.8 137 53.3
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 3.9e-28 128.6 140 57.1
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 3.9e-28 128.6 128 51.6
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 5.1e-28 128.3 137 47.4
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 5.1e-28 128.3 136 55.1
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 5.1e-28 128.3 131 55.0
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 5.1e-28 128.3 134 54.5
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 1.5e-27 126.7 137 52.6
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 3.3e-27 125.6 123 55.3
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 3.3e-27 125.6 144 52.8
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 7.4e-27 124.4 135 52.6
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 7.4e-27 124.4 132 52.3
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 9.6e-27 124.0 136 51.5
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 9.6e-27 124.0 146 48.6
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 1.3e-26 123.6 141 51.8
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.3e-26 123.6 137 51.8
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 1.6e-26 123.2 136 51.5
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 2.1e-26 122.9 137 50.4
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 2.1e-26 122.9 135 52.6
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 2.8e-26 122.5 135 52.6
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 2.8e-26 122.5 135 52.6
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 2.8e-26 122.5 121 54.5
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 3.7e-26 122.1 135 52.6
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 3.7e-26 122.1 138 51.4
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 3.7e-26 122.1 149 48.3
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 6.2e-26 121.3 137 51.8
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 1.1e-25 120.6 131 51.9
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 1.1e-25 120.6 138 52.2
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.1e-25 120.6 135 51.1
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 1.4e-25 120.2 138 52.9
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 2.4e-25 119.4 140 48.6
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 3.1e-25 119.0 137 50.4
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 4.0e-25 118.6 136 50.0
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 5.3e-25 118.2 129 49.6
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.2e-24 117.1 139 48.2
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 1.5e-24 116.7 135 48.1
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 2.0e-24 116.3 135 48.9
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 2.6e-24 115.9 141 49.6
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 2.2e-23 112.8 129 51.2
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 2.9e-23 112.5 138 49.3
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 2.9e-23 112.5 99 52.5
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 3.8e-23 112.1 116 50.9
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 5.5e-22 108.2 130 50.0
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 9.3e-22 107.5 106 59.4
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 9.3e-22 107.5 106 59.4
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 2.1e-21 106.3 94 55.3
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 1.3e-20 103.6 79 69.6
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 1.3e-20 103.6 138 48.6
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 5.1e-20 101.7 84 66.7
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 5.1e-20 101.7 84 66.7
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 1.9e-19 99.8 90 58.9
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 5.9e-16 88.2 100 51.0
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 1.0e-15 87.4 100 51.0
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 2.9e-15 85.9 100 50.0
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 2.9e-15 85.9 100 50.0
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 1.1e-14 84.0 136 41.9
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 3.3e-11 72.4 61 54.1
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 9.7e-11 70.9 132 38.6
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 4.8e-10 68.6 66 62.1
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 3.1e-09 65.9 127 37.8
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 5.9e-08 61.6 114 37.7
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 2.2e-07 59.7 135 33.3
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 1.1e-06 57.4 86 39.5


User provided reference genes

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