Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 7.6e-77 290.4 147 100.0
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 9.3e-67 256.9 146 85.6
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 1.2e-66 256.5 145 84.8
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 3.5e-66 255.0 144 85.4
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 1.3e-65 253.1 142 85.2
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.3e-65 253.1 142 85.2
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 1.8e-65 252.7 146 82.9
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 1.8e-65 252.7 145 84.8
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 5.1e-65 251.1 145 82.8
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 8.7e-65 250.4 142 86.6
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 8.7e-65 250.4 142 85.2
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 8.7e-65 250.4 142 85.9
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 1.1e-64 250.0 145 83.4
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.9e-64 249.2 145 83.4
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 1.9e-64 249.2 145 83.4
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 2.5e-64 248.8 145 83.4
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 5.7e-64 247.7 142 83.1
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 5.7e-64 247.7 145 82.8
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 5.7e-64 247.7 144 82.6
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 9.7e-64 246.9 142 83.1
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 9.7e-64 246.9 145 82.1
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 1.3e-63 246.5 142 81.0
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 1.6e-63 246.1 142 83.8
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 1.6e-63 246.1 142 83.8
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 1.6e-63 246.1 144 81.9
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 1.6e-63 246.1 142 84.5
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 2.2e-63 245.7 146 80.1
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 2.2e-63 245.7 142 83.1
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 2.2e-63 245.7 142 81.7
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 2.8e-63 245.4 142 82.4
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 2.8e-63 245.4 142 84.5
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 2.8e-63 245.4 142 83.1
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 2.8e-63 245.4 143 85.3
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 3.7e-63 245.0 142 82.4
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 3.7e-63 245.0 142 82.4
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 4.8e-63 244.6 142 82.4
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 4.8e-63 244.6 142 82.4
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 4.8e-63 244.6 142 82.4
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 4.8e-63 244.6 145 82.1
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 6.3e-63 244.2 142 82.4
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 8.2e-63 243.8 141 83.7
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 8.2e-63 243.8 142 81.7
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 1.1e-62 243.4 138 85.5
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 1.1e-62 243.4 141 82.3
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.1e-62 243.4 141 83.0
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 1.4e-62 243.0 142 82.4
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 1.4e-62 243.0 146 79.5
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.4e-62 243.0 142 82.4
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 2.4e-62 242.3 142 81.0
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 2.4e-62 242.3 146 78.8
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 2.4e-62 242.3 142 80.3
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 3.1e-62 241.9 142 81.7
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 3.1e-62 241.9 145 81.4
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 4.1e-62 241.5 147 81.6
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 5.3e-62 241.1 141 80.9
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 5.3e-62 241.1 142 81.0
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 5.3e-62 241.1 142 81.0
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 6.9e-62 240.7 148 80.4
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 6.9e-62 240.7 142 80.3
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 6.9e-62 240.7 142 83.1
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 1.2e-61 240.0 142 80.3
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.2e-61 240.0 141 81.6
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 1.2e-61 240.0 142 81.0
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 1.5e-61 239.6 142 79.6
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 1.5e-61 239.6 145 80.0
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 2.0e-61 239.2 142 78.2
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 2.0e-61 239.2 141 83.0
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 2.6e-61 238.8 144 79.2
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 3.4e-61 238.4 142 80.3
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 3.4e-61 238.4 138 84.1
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 4.5e-61 238.0 141 80.9
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 7.6e-61 237.3 142 81.7
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 1.0e-60 236.9 142 79.6
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 1.7e-60 236.1 143 79.7
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 1.7e-60 236.1 141 81.6
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 1.7e-60 236.1 144 75.7
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 1.7e-60 236.1 142 78.9
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 2.2e-60 235.7 142 78.9
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 2.2e-60 235.7 145 77.2
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 5.0e-60 234.6 144 78.5
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 6.5e-60 234.2 142 75.4
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 1.1e-59 233.4 166 71.1
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 1.4e-59 233.0 141 79.4
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 1.9e-59 232.6 141 77.3
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 1.9e-59 232.6 141 77.3
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 4.2e-59 231.5 142 78.9
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 7.2e-59 230.7 143 79.0
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 1.2e-58 229.9 142 76.8
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 3.6e-58 228.4 160 71.9
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 7.9e-58 227.3 166 69.9
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 1.0e-57 226.9 142 75.4
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 1.4e-57 226.5 142 74.6
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 1.8e-57 226.1 145 76.6
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 2.3e-57 225.7 142 78.9
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 3.9e-57 224.9 145 75.2
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 3.9e-57 224.9 142 73.9
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 6.7e-57 224.2 141 76.6
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 1.5e-56 223.0 141 75.9
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 9.7e-56 220.3 142 75.4
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 1.7e-55 219.5 158 67.1
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 3.7e-55 218.4 144 73.6
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 3.7e-55 218.4 142 73.2
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 1.8e-54 216.1 142 73.9
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 3.1e-54 215.3 141 73.0
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 6.9e-54 214.2 142 71.8
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 1.5e-53 213.0 144 72.2
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 2.0e-53 212.6 147 74.1
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 5.9e-53 211.1 144 70.1
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 1.0e-52 210.3 145 71.7
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 1.3e-52 209.9 141 71.6
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 1.3e-52 209.9 141 71.6
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 1.3e-52 209.9 141 71.6
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 1.3e-52 209.9 141 71.6
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 5.0e-52 208.0 144 70.8
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 3.2e-51 205.3 141 70.2
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 3.2e-51 205.3 141 69.5
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 3.2e-51 205.3 141 69.5
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 3.2e-51 205.3 141 70.2
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 4.7e-50 201.4 186 57.5
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 5.3e-46 188.0 132 65.2
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 4.5e-45 184.9 144 68.8
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 7.2e-43 177.6 116 73.3
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 3.3e-40 168.7 139 59.0
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 2.2e-39 166.0 95 82.1
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 5.9e-37 157.9 93 81.7
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 5.0e-36 154.8 144 54.9
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 1.1e-35 153.7 104 70.2
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 2.7e-34 149.1 93 74.2
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 8.8e-33 144.1 138 51.4
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 1.1e-30 137.1 86 76.7
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 5.9e-29 131.3 98 65.3
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 1.3e-28 130.2 142 49.3
HanXRQChr11g0333491 Helianthus annuus HOM05D005761 ORTHO05D007286 2.0e-21 106.3 116 46.6
Sopen03g039470 Solanum pennellii HOM05D005761 ORTHO05D007286 7.7e-21 104.4 60 75.0
HanXRQChr08g0232791 Helianthus annuus HOM05D005761 ORTHO05D007286 1.2e-18 97.1 116 43.1
Rhsim08G0224100 Rhododendron simsii HOM05D000414 ORTHO05D000276 9.2e-14 80.9 50 82.0
Rhsim08G0203300 Rhododendron simsii HOM05D005761 ORTHO05D007286 5.9e-13 78.2 53 66.0


User provided reference genes

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