Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 0.0e+00 2482.6 1250 100.0
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 3.9e-174 616.7 1480 34.4
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 4.3e-136 490.3 1335 32.3
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 2.4e-110 404.8 1332 29.2
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 1.2e-90 339.3 1403 27.8
TAR626G0792 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.1e-86 326.2 576 40.8
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 3.8e-84 317.8 1392 28.2
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 3.6e-74 284.6 1361 26.4
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 7.4e-72 276.9 1354 26.2
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 1.8e-70 272.3 1352 25.4
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 6.9e-70 270.4 1455 25.5
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 5.9e-69 267.3 1338 26.0
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 1.9e-67 262.3 1416 25.7
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.7e-66 258.5 1416 26.5
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 4.7e-66 257.7 1349 25.1
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 6.1e-66 257.3 1332 25.0
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 2.2e-63 248.8 1366 25.8
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 8.2e-63 246.9 1339 25.8
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 1.8e-62 245.7 1336 26.2
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 3.4e-61 241.5 1357 25.9
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 1.3e-60 239.6 1324 25.1
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.7e-60 239.2 1337 25.4
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 2.2e-60 238.8 1344 25.0
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 2.9e-60 238.4 1337 25.2
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.1e-59 236.5 1337 25.7
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 1.4e-57 229.6 1347 25.2
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 5.2e-57 227.6 1400 25.6
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.1e-56 226.5 1338 24.9
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.3e-54 217.6 1346 24.6
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.0e-52 213.4 1331 24.0
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 2.2e-52 212.2 1361 23.4
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 2.9e-52 211.8 1294 23.6
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 1.5e-51 209.5 1021 25.8
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.6e-50 206.1 1367 26.0
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 6.1e-50 204.1 1335 24.4
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.0e-49 203.4 1338 24.1
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 2.7e-45 188.7 1255 24.4
Dinv38014 Davidia involucrata HOM05D004021 ORTHO05D003767 2.7e-45 188.7 1337 24.4
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 1.3e-44 186.4 1402 24.7
Gohir.D07G026600 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.0e-44 184.5 1289 24.0
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 1.1e-43 183.3 1273 23.6
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 4.2e-43 181.4 243 44.0
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 2.7e-42 178.7 1272 23.6
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 2.3e-36 159.1 1338 24.4
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 3.3e-35 155.2 1420 22.5
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 4.7e-34 151.4 1393 23.3
ClCG11G015210 Citrullus lanatus HOM05D004021 ORTHO05D003767 8.0e-34 150.6 794 26.2
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 3.0e-33 148.7 1364 23.8
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 5.2e-33 147.9 1290 24.8
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 7.5e-32 144.1 1306 25.5
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 8.3e-31 140.6 1329 23.9
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 1.4e-30 139.8 1363 24.4
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 3.1e-30 138.7 1049 23.2
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 9.2e-30 137.1 1285 23.3
TWI63G0612 Tripterygium wilfordii HOM05D004021 ORTHO05D003767 9.2e-30 137.1 722 26.3
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 2.0e-29 136.0 1311 22.8
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 5.0e-28 131.3 1356 23.7
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 1.5e-27 129.8 861 24.7
Glyma.04G081800 Glycine max HOM05D004021 ORTHO05D003767 5.6e-27 127.9 1322 23.1
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 5.6e-27 127.9 1240 22.4
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 3.6e-26 125.2 1314 22.9
Medtr3g110082 Medicago truncatula HOM05D004021 ORTHO05D003767 4.7e-26 124.8 1351 23.7
PSO782G1327 Papaver somniferum HOM05D004021 ORTHO05D003767 6.1e-26 124.4 1339 22.2
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 1.8e-25 122.9 1297 22.7
VMungo1309G0329 Vigna mungo HOM05D004021 ORTHO05D003767 1.8e-25 122.9 1314 23.1
Medtr3g110132 Medicago truncatula HOM05D004021 ORTHO05D003767 2.3e-25 122.5 1357 23.5
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 4.0e-25 121.7 1365 22.6
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 4.0e-25 121.7 1375 22.6
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 1.2e-24 120.2 1273 22.7
Dinv30474 Davidia involucrata HOM05D004021 ORTHO05D003767 5.8e-24 117.9 865 24.9
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 7.5e-24 117.5 1241 21.8
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 9.8e-24 117.1 1124 23.6
Rhsim08G0224000 Rhododendron simsii HOM05D004021 ORTHO05D003767 3.7e-23 115.2 1008 23.2
ClCG08G012320 Citrullus lanatus HOM05D004021 ORTHO05D003767 8.3e-23 114.0 1276 21.3
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 8.3e-23 114.0 1314 22.8
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 8.3e-23 114.0 1299 22.6
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 1.9e-22 112.8 1264 21.9
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 1.9e-22 112.8 1364 22.9
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 1.2e-21 110.2 1262 21.2
CsaV3_2G030990 Cucumis sativus L. HOM05D004021 ORTHO05D003767 7.8e-21 107.5 632 25.2
Aqoxy7G01578 Aquilegia oxysepala HOM05D065736 ORTHO05D038511 1.0e-20 107.1 824 23.5
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.9e-20 105.1 1302 22.6
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 8.6e-20 104.0 1334 22.3
TAR626G1566 Trochodendron aralioides HOM05D004021 ORTHO05D003767 5.6e-19 101.3 221 37.6
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 7.3e-19 100.9 1306 22.7
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 1.2e-18 100.1 100 48.0
Lj8P589T23 Lonicera japonica HOM05D004021 ORTHO05D003767 4.7e-18 98.2 582 24.2
Eucgr.E03518 Eucalyptus grandis HOM05D004021 ORTHO05D003767 1.1e-17 97.1 567 26.5
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 1.4e-17 96.7 1309 22.5
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 6.8e-17 94.4 1263 22.2
MELO3C011152.2 Cucumis melo HOM05D004021 ORTHO05D003767 1.5e-16 93.2 1281 21.9
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 9.8e-16 90.5 1356 22.0
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 1.3e-15 90.1 98 42.9
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 2.9e-15 89.0 1333 22.1
vmacro05366 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 2.9e-15 89.0 1293 21.7
Cpa.g.sc7.256 Carica papaya HOM05D004021 ORTHO05D003767 4.9e-15 88.2 400 26.2
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 8.3e-15 87.4 124 37.9
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 1.1e-14 87.0 169 33.1
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 1.4e-14 86.7 1269 21.9
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 3.2e-14 85.5 1315 21.7
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 4.1e-14 85.1 1010 23.3
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 4.1e-14 85.1 1348 21.1
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 1.2e-13 83.6 105 43.8
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 2.1e-13 82.8 1321 22.0
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.7e-13 82.4 1302 22.0
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 3.5e-13 82.0 585 24.1
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 3.5e-13 82.0 1316 21.3
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 4.6e-13 81.6 88 47.7
Dinv30475 Davidia involucrata HOM05D024977 ORTHO05D003767 4.6e-13 81.6 475 27.2
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 6.0e-13 81.3 304 25.7
Lalb_Chr11g0064431 Lupinus albus HOM05D004021 ORTHO05D003767 6.0e-13 81.3 1295 22.2
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 7.8e-13 80.9 1216 22.7
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 7.8e-13 80.9 91 46.2
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 7.8e-13 80.9 91 46.2
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 7.8e-13 80.9 91 46.2
FAN20G0872 Fragaria x ananassa HOM05D004021 ORTHO05D003767 7.8e-13 80.9 404 27.0
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 1.0e-12 80.5 192 31.8
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.0e-12 80.5 1326 22.5
FAN09G3084 Fragaria x ananassa HOM05D004021 ORTHO05D003767 2.3e-12 79.3 408 26.2
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 2.3e-12 79.3 97 42.3
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 3.0e-12 79.0 88 46.6
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 3.0e-12 79.0 88 46.6
FAN02G4319 Fragaria x ananassa HOM05D004021 ORTHO05D003767 3.0e-12 79.0 408 26.2
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 6.6e-12 77.8 108 38.9
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 1.1e-11 77.0 86 44.2
FAN13G2039 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.1e-11 77.0 319 27.9
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 1.1e-11 77.0 84 40.5
Sc09g0009160 Simmondsia chinensis HOM05D012164 ORTHO05D003767 1.1e-11 77.0 556 24.5
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.5e-11 76.6 82 46.3
FAN20G1338 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.5e-11 76.6 408 26.0
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 1.9e-11 76.3 1254 20.8
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 4.3e-11 75.1 1226 20.1
Lsat_1_v5_gn_6_64101 Lactuca sativa HOM05D004021 ORTHO05D003767 5.6e-11 74.7 174 31.6
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 7.3e-11 74.3 211 29.9
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 7.3e-11 74.3 1222 20.4
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 7.3e-11 74.3 82 45.1
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 9.5e-11 73.9 86 39.5
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 1.2e-10 73.6 1310 21.9
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 1.2e-10 73.6 211 29.4
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 1.2e-10 73.6 1304 22.1
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 1.2e-10 73.6 176 30.1
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 1.2e-10 73.6 1251 20.4
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 1.6e-10 73.2 100 39.0
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 1.6e-10 73.2 1272 21.9
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 2.1e-10 72.8 82 37.8
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 2.8e-10 72.4 95 41.1
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 3.6e-10 72.0 108 36.1
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 3.6e-10 72.0 1236 20.9
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 6.2e-10 71.2 756 21.7
CDE05G2697 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 6.2e-10 71.2 709 22.8
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 6.2e-10 71.2 128 33.6
Aqoxy4G01254 Aquilegia oxysepala HOM05D065736 ORTHO05D038511 1.4e-09 70.1 340 23.8
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 1.4e-09 70.1 116 35.3
Dinv10761 Davidia involucrata HOM05D024977 ORTHO05D003767 1.8e-09 69.7 56 53.6
Dinv30643 Davidia involucrata HOM05D024977 ORTHO05D003767 1.8e-09 69.7 56 53.6
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 2.3e-09 69.3 755 22.1
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 2.3e-09 69.3 81 39.5
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 3.1e-09 68.9 221 29.9
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 4.0e-09 68.6 1132 21.9
Atru.chr7.2139 Acer truncatum HOM05D004021 ORTHO05D003767 6.8e-09 67.8 279 26.9
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 6.8e-09 67.8 70 44.3
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.5e-08 66.6 79 36.7
Lsat_1_v5_gn_4_94561 Lactuca sativa HOM05D004021 ORTHO05D003767 2.6e-08 65.9 95 38.9
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 2.6e-08 65.9 122 35.2
ECA233G1986 Erigeron canadensis HOM05D004021 ORTHO05D003767 3.4e-08 65.5 98 37.8
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 1.7e-07 63.2 92 34.8
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 3.7e-07 62.0 772 23.6
SHI18661 Sapria himalayana HOM05D004021 ORTHO05D003767 6.4e-07 61.2 57 45.6
Sed0002796 Sechium edule HOM05D004021 ORTHO05D003767 6.4e-07 61.2 1274 20.6
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 8.3e-07 60.8 98 35.7
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 1.1e-06 60.5 924 21.6
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 1.4e-06 60.1 68 39.7
SEGI_32539 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 2.4e-06 59.3 65 46.2
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.1e-06 58.5 617 22.7


User provided reference genes

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