Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.7e-111 406.0 202 100.0
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.0e-68 263.8 143 93.0
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 8.6e-47 191.0 143 67.1
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 2.9e-42 176.0 134 67.9
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.4e-41 173.7 139 63.3
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.4e-41 173.7 141 65.2
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 3.2e-41 172.6 138 63.0
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 7.1e-41 171.4 138 65.2
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 7.1e-41 171.4 135 66.7
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.2e-40 170.6 140 62.1
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 3.5e-40 169.1 135 64.4
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 6.0e-40 168.3 141 62.4
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 6.0e-40 168.3 138 63.0
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 7.8e-40 167.9 138 62.3
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.0e-39 167.5 148 59.5
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.0e-39 167.5 148 59.5
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.0e-39 167.5 135 65.9
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.3e-39 167.2 148 59.5
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 3.0e-39 166.0 135 64.4
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 6.6e-39 164.9 138 61.6
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 8.7e-39 164.5 136 63.2
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.5e-38 163.7 134 64.9
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 4.3e-38 162.2 134 64.2
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 5.6e-38 161.8 145 58.6
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 7.3e-38 161.4 130 63.1
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 9.6e-38 161.0 144 61.1
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 9.6e-38 161.0 140 58.6
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.3e-37 160.6 144 60.4
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.3e-37 160.6 138 60.9
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.6e-37 160.2 145 59.3
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 2.1e-37 159.8 144 58.3
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 2.1e-37 159.8 136 63.2
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.8e-37 159.5 146 58.2
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 2.8e-37 159.5 137 58.4
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.8e-37 159.5 140 60.7
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 3.6e-37 159.1 141 58.2
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 3.6e-37 159.1 140 60.0
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 3.6e-37 159.1 119 70.6
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 4.8e-37 158.7 143 60.1
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 4.8e-37 158.7 141 59.6
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 6.2e-37 158.3 137 56.9
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 6.2e-37 158.3 134 61.9
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.1e-36 157.5 143 57.3
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.1e-36 157.5 144 60.4
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.1e-36 157.5 142 60.6
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.1e-36 157.5 142 60.6
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 1.4e-36 157.1 147 59.2
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.4e-36 157.1 141 59.6
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.8e-36 156.8 138 61.6
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 5.3e-36 155.2 149 57.7
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 6.9e-36 154.8 144 54.2
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.0e-36 154.5 131 61.8
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.0e-36 154.5 131 61.8
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 1.2e-35 154.1 146 57.5
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.2e-35 154.1 141 58.9
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 1.5e-35 153.7 144 57.6
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.0e-35 153.3 135 60.0
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 2.6e-35 152.9 141 58.2
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 3.4e-35 152.5 147 58.5
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 7.6e-35 151.4 139 56.8
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 9.9e-35 151.0 152 54.6
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 1.3e-34 150.6 139 56.1
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.7e-34 150.2 139 56.1
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.9e-34 149.4 149 56.4
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 2.9e-34 149.4 134 58.2
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 2.9e-34 149.4 153 54.9
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 3.8e-34 149.1 145 55.9
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 3.8e-34 149.1 143 56.6
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 4.9e-34 148.7 134 59.0
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 4.9e-34 148.7 143 56.6
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 4.9e-34 148.7 134 59.0
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 4.9e-34 148.7 134 59.0
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 4.9e-34 148.7 153 54.9
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 8.4e-34 147.9 134 59.0
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 8.4e-34 147.9 134 57.5
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 8.4e-34 147.9 150 55.3
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.1e-33 147.5 150 54.0
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.4e-33 147.1 142 59.9
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 1.4e-33 147.1 139 56.8
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.9e-33 146.7 141 58.2
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 2.4e-33 146.4 137 61.3
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 3.2e-33 146.0 139 54.7
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 4.2e-33 145.6 134 58.2
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 4.2e-33 145.6 143 54.5
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 7.1e-33 144.8 135 58.5
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 7.1e-33 144.8 140 56.4
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.2e-32 144.1 156 54.5
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 2.1e-32 143.3 141 55.3
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 2.1e-32 143.3 138 58.7
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 3.5e-32 142.5 134 56.0
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 3.5e-32 142.5 130 59.2
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 3.5e-32 142.5 134 55.2
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 6.0e-32 141.7 134 56.7
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 6.0e-32 141.7 175 49.1
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 6.0e-32 141.7 138 58.0
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 7.8e-32 141.4 134 56.7
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 7.8e-32 141.4 137 54.7
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 7.8e-32 141.4 134 56.7
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.0e-31 141.0 134 58.2
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 1.3e-31 140.6 137 54.7
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.3e-31 140.6 145 52.4
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.7e-31 140.2 136 57.4
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 5.1e-31 138.7 145 53.1
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 1.9e-30 136.7 139 56.1
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 4.3e-30 135.6 139 53.2
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.6e-29 133.7 122 60.7
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 2.8e-29 132.9 139 50.4
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 4.8e-29 132.1 144 51.4
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 2.2e-26 123.2 134 53.7
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 8.4e-26 121.3 147 45.6
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.4e-25 120.6 153 43.8
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 1.2e-24 117.5 134 47.8
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 6.0e-24 115.2 141 48.9
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 5.1e-23 112.1 219 36.1
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 6.7e-23 111.7 94 61.7
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 8.7e-23 111.3 170 45.9
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.1e-22 110.9 179 40.8
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 2.5e-22 109.8 78 66.7
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.3e-21 107.5 136 48.5
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.8e-21 106.3 145 45.5
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 4.0e-20 102.4 111 53.2
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 1.6e-16 90.5 139 41.7
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 7.4e-14 81.6 83 53.0
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 4.8e-13 79.0 132 40.9
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 4.5e-11 72.4 103 39.8
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 3.5e-08 62.8 126 39.7
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 6.1e-08 62.0 107 34.6
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.8e-07 60.5 73 46.6
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 2.5e-06 56.6 37 73.0


User provided reference genes

Program Settings