Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 5.7e-170 600.9 319 100.0
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 2.9e-137 492.3 336 77.7
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 2.9e-137 492.3 336 77.7
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 6.0e-135 484.6 336 75.3
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 1.7e-134 483.0 336 74.4
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 1.1e-133 480.3 336 74.4
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.9e-133 479.6 336 74.1
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 1.9e-133 479.6 335 74.0
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 3.3e-133 478.8 336 75.0
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 1.1e-131 473.8 336 72.6
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 1.4e-131 473.4 336 73.5
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 1.8e-131 473.0 337 73.6
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 5.2e-131 471.5 337 73.6
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 5.2e-131 471.5 336 75.0
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 8.9e-131 470.7 336 73.5
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 8.9e-131 470.7 341 74.5
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 3.4e-130 468.8 337 73.3
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 3.4e-130 468.8 336 73.8
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 7.6e-130 467.6 336 73.2
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 1.3e-129 466.8 337 72.4
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 1.3e-129 466.8 339 74.0
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 3.7e-129 465.3 336 72.0
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 1.4e-128 463.4 338 73.7
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 5.4e-128 461.5 336 72.3
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 9.2e-128 460.7 333 74.2
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 9.2e-128 460.7 335 72.2
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 9.2e-128 460.7 337 72.4
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 1.2e-127 460.3 336 72.6
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.2e-127 460.3 336 71.1
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 2.1e-127 459.5 336 71.7
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 2.7e-127 459.1 336 71.1
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 4.6e-127 458.4 335 73.4
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 6.0e-127 458.0 335 70.7
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 6.0e-127 458.0 336 72.6
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 7.8e-127 457.6 336 72.0
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 7.8e-127 457.6 335 70.7
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 1.0e-126 457.2 335 70.7
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 1.0e-126 457.2 336 72.0
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 2.3e-126 456.1 336 71.7
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 3.0e-126 455.7 336 71.4
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 3.0e-126 455.7 336 71.7
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 3.9e-126 455.3 336 71.4
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 6.6e-126 454.5 336 71.7
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 1.1e-125 453.8 336 72.0
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.5e-125 453.4 335 70.4
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 3.3e-125 452.2 336 71.7
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 7.3e-125 451.1 334 71.9
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 6.2e-124 448.0 334 69.2
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 6.2e-124 448.0 333 71.2
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 8.1e-124 447.6 336 70.5
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 2.4e-123 446.0 334 70.7
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 2.4e-123 446.0 334 70.7
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 3.1e-123 445.7 329 71.7
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 1.5e-122 443.4 334 70.7
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 1.5e-122 443.4 334 70.7
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 1.5e-122 443.4 333 70.6
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 2.0e-122 443.0 334 70.4
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 2.0e-122 443.0 358 67.6
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 2.6e-122 442.6 334 70.1
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 3.4e-122 442.2 336 69.9
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 4.4e-122 441.8 334 70.4
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 4.4e-122 441.8 334 70.4
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 4.4e-122 441.8 334 70.4
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 1.7e-121 439.9 334 70.1
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 2.9e-121 439.1 334 69.8
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 2.4e-120 436.0 334 69.2
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 1.2e-119 433.7 346 67.6
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 2.1e-119 433.0 383 62.1
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 3.5e-119 432.2 336 69.9
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 3.5e-119 432.2 336 70.5
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 3.5e-119 432.2 332 69.0
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 4.6e-119 431.8 336 68.8
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 1.0e-118 430.6 335 67.5
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 1.3e-118 430.3 335 68.7
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 1.7e-118 429.9 342 68.7
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 2.3e-118 429.5 338 69.2
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 2.3e-118 429.5 336 68.2
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 2.3e-118 429.5 326 67.8
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 3.0e-118 429.1 338 69.2
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 3.9e-118 428.7 335 66.9
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 5.1e-118 428.3 334 65.9
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 6.6e-118 427.9 338 69.2
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 8.7e-118 427.6 346 66.5
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 2.5e-117 426.0 315 71.7
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 1.6e-116 423.3 335 68.7
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 2.1e-116 422.9 336 68.2
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 5.3e-115 418.3 334 67.4
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 3.4e-114 415.6 349 65.0
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 7.6e-114 414.5 406 59.1
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 1.7e-113 413.3 331 67.4
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.4e-112 410.2 308 70.1
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.9e-112 409.8 313 69.3
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 3.3e-109 399.1 319 68.3
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 2.1e-108 396.4 299 70.2
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 2.4e-107 392.9 326 63.8
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 7.6e-106 387.9 263 76.4
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 7.6e-106 387.9 334 63.8
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 9.9e-106 387.5 308 66.2
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 4.2e-104 382.1 263 74.9
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 1.6e-103 380.2 295 69.5
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 9.6e-101 370.9 336 62.8
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 6.2e-100 368.2 388 56.2
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 5.3e-99 365.2 418 52.2
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 2.6e-98 362.8 335 59.7
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 1.0e-97 360.9 292 67.1
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 2.9e-97 359.4 317 61.8
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 8.4e-97 357.8 335 59.4
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 9.0e-91 337.8 310 61.9
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 5.1e-86 322.0 196 80.1
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 3.3e-85 319.3 413 48.9
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 3.7e-84 315.8 374 50.8
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 8.2e-84 314.7 218 72.9
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 3.4e-82 309.3 319 57.1
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 7.7e-82 308.1 198 76.8
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 1.5e-74 283.9 246 63.8
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 3.8e-73 279.3 300 51.7
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 1.2e-71 274.2 249 62.2
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.7e-63 246.5 335 47.5
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 8.8e-62 241.5 249 55.8
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 2.2e-60 236.9 302 46.4
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 6.3e-60 235.3 169 69.2
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 5.3e-59 232.3 200 63.0
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 3.7e-52 209.5 135 76.3
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 5.9e-50 202.2 254 48.8
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 1.2e-47 194.5 135 74.1
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 8.6e-41 171.8 349 33.8
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 8.6e-41 171.8 122 73.0
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 7.3e-40 168.7 165 58.8
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 1.6e-39 167.5 192 49.0
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 6.1e-39 165.6 238 46.2
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 2.9e-36 156.8 136 64.7
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 8.3e-36 155.2 167 55.1
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 5.4e-35 152.5 299 34.1
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 7.3e-32 142.1 355 30.4
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 9.5e-32 141.7 316 31.6
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 3.1e-30 136.7 110 68.2
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 1.7e-25 120.9 103 64.1
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 4.3e-24 116.3 95 64.2
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 3.6e-23 113.2 65 86.2
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 5.8e-21 105.9 78 73.1
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 2.7e-18 97.1 106 54.7
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 1.5e-16 91.3 64 67.2


User provided reference genes

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