Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 0.0e+00 1274.2 658 100.0
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 2.5e-111 407.1 677 40.2
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.4e-109 401.4 687 40.9
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.2e-107 394.0 686 39.9
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.2e-107 394.0 686 39.9
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 6.0e-89 332.8 721 35.9
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 7.3e-87 325.9 746 35.3
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 3.5e-81 307.0 738 34.7
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 7.8e-81 305.8 699 36.1
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 3.9e-80 303.5 697 35.7
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 1.1e-79 302.0 742 36.4
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 7.3e-79 299.3 666 36.5
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 1.6e-78 298.1 726 34.0
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 6.9e-77 292.7 842 32.5
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 9.0e-77 292.4 882 30.6
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 1.2e-76 292.0 725 34.2
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 4.9e-75 286.6 698 35.0
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 2.4e-74 284.3 759 34.1
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 7.1e-74 282.7 758 33.5
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 4.6e-73 280.0 723 33.1
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 4.6e-73 280.0 687 33.3
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 1.0e-72 278.9 787 30.6
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 5.1e-72 276.6 719 31.4
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 8.7e-72 275.8 736 31.9
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 4.3e-71 273.5 719 36.0
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 7.4e-71 272.7 669 33.6
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 9.6e-71 272.3 676 34.2
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 9.6e-71 272.3 701 33.7
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.3e-70 271.9 701 33.4
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 4.8e-70 270.0 759 33.1
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 4.8e-70 270.0 724 31.6
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 8.1e-70 269.2 759 32.4
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 9.0e-69 265.8 678 34.5
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.5e-68 265.0 724 33.0
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 2.6e-68 264.2 678 31.9
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.6e-68 264.2 744 34.1
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.6e-68 264.2 675 34.1
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 2.6e-68 264.2 735 32.5
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 3.4e-68 263.8 677 34.4
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 1.1e-66 258.8 860 31.0
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 5.5e-66 256.5 670 33.9
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 7.1e-66 256.1 675 33.0
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 1.6e-65 255.0 726 32.2
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 1.6e-65 255.0 720 32.8
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 4.6e-65 253.4 777 30.1
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 7.9e-65 252.7 843 30.5
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 1.8e-64 251.5 864 29.9
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 2.3e-64 251.1 649 33.3
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.5e-63 248.4 906 28.1
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.3e-62 245.4 674 33.7
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 2.1e-62 244.6 708 32.6
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.1e-61 242.3 677 32.1
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 3.1e-61 240.7 636 34.0
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.0e-60 238.0 789 31.1
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 4.5e-60 236.9 777 29.5
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.3e-59 235.3 396 40.2
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 3.8e-59 233.8 664 32.8
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 3.8e-59 233.8 651 31.5
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 4.9e-59 233.4 382 41.4
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 6.5e-59 233.0 737 31.6
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 1.4e-58 231.9 748 30.1
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 1.4e-58 231.9 828 29.7
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 7.1e-58 229.6 799 28.3
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 1.6e-57 228.4 699 32.3
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 3.5e-57 227.3 692 32.9
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 5.1e-56 223.4 711 32.1
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 2.8e-54 217.6 689 31.5
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 2.8e-54 217.6 703 31.3
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 2.8e-54 217.6 739 29.2
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.7e-54 217.2 662 32.6
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 1.1e-53 215.7 772 29.7
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 1.4e-53 215.3 711 30.2
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 2.4e-53 214.5 646 30.2
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 3.1e-53 214.2 701 30.2
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 5.3e-53 213.4 767 28.6
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 6.9e-53 213.0 781 30.1
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.2e-52 212.2 687 31.7
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 1.2e-52 212.2 824 28.3
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 2.0e-52 211.5 760 30.0
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 3.4e-52 210.7 701 30.2
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 4.5e-52 210.3 765 29.7
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.3e-51 208.8 723 30.6
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 6.5e-51 206.5 624 32.7
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 1.1e-50 205.7 733 29.3
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.9e-50 204.9 405 38.3
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 1.8e-48 198.4 438 34.7
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 1.8e-48 198.4 678 29.8
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 5.1e-48 196.8 638 29.3
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 8.7e-48 196.1 700 30.1
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 1.9e-47 194.9 663 30.3
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 9.7e-47 192.6 608 31.4
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 9.7e-47 192.6 861 27.2
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.3e-46 192.2 756 29.6
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 2.8e-46 191.0 757 29.7
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 4.8e-46 190.3 738 27.9
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 3.1e-45 187.6 713 29.9
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.1e-45 187.6 756 29.0
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 5.3e-45 186.8 750 29.9
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 1.2e-44 185.7 520 32.7
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 2.0e-44 184.9 716 29.3
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 5.9e-44 183.3 749 27.9
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 1.3e-43 182.2 754 30.2
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 5.0e-43 180.3 913 25.4
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 1.9e-42 178.3 757 30.1
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 5.1e-40 170.2 738 26.6
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 6.7e-40 169.9 701 30.2
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 9.7e-39 166.0 772 28.6
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 1.1e-37 162.5 754 26.9
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 3.1e-37 161.0 549 28.4
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 1.2e-36 159.1 756 27.5
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.0e-36 158.3 625 29.0
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 2.0e-36 158.3 510 30.2
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 2.6e-36 157.9 725 27.2
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 7.7e-36 156.4 705 28.1
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 1.1e-34 152.5 667 27.4
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 1.9e-34 151.8 378 33.9
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 5.9e-28 130.2 185 44.9
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 3.8e-27 127.5 311 35.4
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 1.5e-26 125.6 768 26.6
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 1.2e-25 122.5 390 29.5
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 8.0e-25 119.8 676 24.3
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.4e-24 119.0 603 27.0
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 4.0e-24 117.5 437 29.1
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 2.0e-23 115.2 497 28.6
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 2.8e-22 111.3 248 31.5
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 2.8e-22 111.3 850 23.4
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 5.3e-21 107.1 644 25.9
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.7e-20 104.8 143 48.3
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 7.7e-20 103.2 128 50.0
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 2.2e-19 101.7 143 44.8
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 9.4e-18 96.3 133 45.1
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 1.6e-17 95.5 132 41.7
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 4.7e-17 94.0 105 50.5
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 9.8e-15 86.3 108 50.9
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 1.7e-14 85.5 83 50.6
MBI16_g26456_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 1.4e-13 82.4 47 83.0
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 3.1e-13 81.3 121 40.5
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 9.1e-13 79.7 72 59.7
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 1.6e-12 79.0 116 44.0
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 5.0e-11 73.9 156 33.3
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.9e-10 72.0 85 45.9
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 7.2e-10 70.1 138 35.5
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 3.6e-09 67.8 526 21.9
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 6.1e-09 67.0 226 27.0
Cre02.g079250 Chlamydomonas reinhardtii HOM05D004831 ORTHO05D003975 2.8e-06 58.2 71 46.5


User provided reference genes

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