Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g09962_MAGBIO Magnolia biondii HOM05D006584 ORTHO05D007640 1.1e-150 536.6 263 100.0
Dinv27980 Davidia involucrata HOM05D006584 ORTHO05D007640 8.0e-69 264.6 186 70.4
Manes.03G047600 Manihot esculenta HOM05D006584 ORTHO05D007640 8.0e-69 264.6 218 65.6
Hma1.2p1_0482F.1_g162540 Hydrangea macrophylla HOM05D006584 ORTHO05D007640 1.0e-68 264.2 193 68.4
Potri.006G230300 Populus trichocarpa HOM05D006584 ORTHO05D007640 2.3e-68 263.1 218 64.2
CSS0009868 Camellia sinensis var. sinensis HOM05D006584 ORTHO05D007640 3.0e-68 262.7 186 69.9
CSS0020610 Camellia sinensis var. sinensis HOM05D006584 ORTHO05D007640 3.0e-68 262.7 186 69.9
Sabra06G0178400 Salix brachista HOM05D006584 ORTHO05D007640 6.8e-68 261.5 193 68.4
Gohir.A13G187100 Gossypium hirsutum HOM05D006584 ORTHO05D007640 1.2e-67 260.8 211 64.0
Actinidia01191 Actinidia chinensis HOM05D006584 ORTHO05D007640 1.5e-67 260.4 176 71.0
Ciclev10008784m.g Citrus clementina HOM05D006584 ORTHO05D007640 2.0e-67 260.0 193 68.4
Medtr1g016440 Medicago truncatula HOM05D006584 ORTHO05D007640 4.4e-67 258.8 179 70.9
Phvul.001G034500 Phaseolus vulgaris HOM05D006584 ORTHO05D007640 5.7e-67 258.5 193 67.9
GSVIVG01035364001 Vitis vinifera HOM05D006584 ORTHO05D007640 5.7e-67 258.5 199 65.8
Atru.chr7.1052 Acer truncatum HOM05D006584 ORTHO05D007640 7.5e-67 258.1 215 61.9
Glyma.17G229600 Glycine max HOM05D006584 ORTHO05D007640 7.5e-67 258.1 176 71.6
Psat6g020800 Pisum sativum HOM05D006584 ORTHO05D007640 9.8e-67 257.7 175 72.0
Lalb_Chr14g0367721 Lupinus albus HOM05D006584 ORTHO05D007640 1.3e-66 257.3 210 63.3
arahy.Tifrunner.gnm1.ann1.3J87F1 Arachis hypogaea HOM05D006584 ORTHO05D007640 2.8e-66 256.1 216 61.1
Cc08_g10530 Coffea canephora HOM05D006584 ORTHO05D007640 3.7e-66 255.8 176 70.5
Cfa017949 Carpinus fangiana HOM05D006584 ORTHO05D007640 4.9e-66 255.4 199 65.8
Rhsim11G0044500 Rhododendron simsii HOM05D006584 ORTHO05D007640 4.9e-66 255.4 201 65.7
Hund19462 Selenicereus undatus HOM05D006584 ORTHO05D007640 4.9e-66 255.4 182 67.6
vmacro00145 Vaccinium macrocarpon HOM05D006584 ORTHO05D007640 4.9e-66 255.4 193 65.3
DCAR_004431 Daucus carota HOM05D006584 ORTHO05D007640 6.3e-66 255.0 199 63.8
Os06g0571100 Oryza sativa ssp. japonica HOM05D006584 ORTHO05D007640 6.3e-66 255.0 182 67.0
CiPaw.15G039500 Carya illinoinensis HOM05D006584 ORTHO05D007640 8.3e-66 254.6 197 66.0
Peaxi162Scf00477g00010 Petunia axillaris HOM05D006584 ORTHO05D007640 8.3e-66 254.6 179 68.2
PGR031G2613 Punica granatum HOM05D006584 ORTHO05D007640 8.3e-66 254.6 180 67.8
arahy.Tifrunner.gnm1.ann1.U8SEXI Arachis hypogaea HOM05D006584 ORTHO05D007640 1.1e-65 254.2 228 58.3
Gorai.013G220000 Gossypium raimondii HOM05D006584 ORTHO05D007640 1.4e-65 253.8 218 61.5
VMungo0647G2476 Vigna mungo HOM05D006584 ORTHO05D007640 1.4e-65 253.8 228 58.3
Lj5g0009338 Lotus japonicus HOM05D006584 ORTHO05D007640 1.8e-65 253.4 175 72.0
TPR.G13096 Trifolium pratense HOM05D006584 ORTHO05D007640 1.8e-65 253.4 175 71.4
MSTRG.11661 Avicennia marina HOM05D006584 ORTHO05D007640 2.4e-65 253.1 176 69.3
Eucgr.C00641 Eucalyptus grandis HOM05D006584 ORTHO05D007640 2.4e-65 253.1 201 66.2
Sc23g0004490 Simmondsia chinensis HOM05D006584 ORTHO05D007640 2.4e-65 253.1 180 68.3
PSO832G1739 Papaver somniferum HOM05D006584 ORTHO05D007640 3.1e-65 252.7 204 63.2
CARHR187290 Cardamine hirsuta HOM05D006584 ORTHO05D007640 9.2e-65 251.1 182 67.6
Gohir.D13G193900 Gossypium hirsutum HOM05D006584 ORTHO05D007640 9.2e-65 251.1 218 61.0
Thecc.09G053100 Theobroma cacao HOM05D006584 ORTHO05D007640 9.2e-65 251.1 176 69.3
PGSC0003DMG400029944 Solanum tuberosum HOM05D006584 ORTHO05D007640 1.2e-64 250.8 176 67.6
Prupe.1G413100 Prunus persica HOM05D006584 ORTHO05D007640 1.6e-64 250.4 177 68.4
QL02p001321 Quercus lobata HOM05D006584 ORTHO05D007640 1.6e-64 250.4 182 67.0
HanXRQChr17g0538441 Helianthus annuus HOM05D006584 ORTHO05D007640 2.7e-64 249.6 199 63.3
Ca_13172_v3 Cicer arietinum L. HOM05D006584 ORTHO05D007640 4.5e-64 248.8 179 67.6
Aqoxy7G01236 Aquilegia oxysepala HOM05D006584 ORTHO05D007640 7.8e-64 248.1 200 61.0
Ca_14355_v3 Cicer arietinum L. HOM05D000495 ORTHO05D007640 7.8e-64 248.1 200 64.0
CDE05G0889 Ceratophyllum demersum HOM05D006584 ORTHO05D007640 1.0e-63 247.7 176 68.8
Sopen08g018910 Solanum pennellii HOM05D006584 ORTHO05D007640 1.0e-63 247.7 176 67.0
Nitab4.5_0004456g0010 Nicotiana tabacum HOM05D006584 ORTHO05D007640 1.3e-63 247.3 176 68.2
COL.COLO4_21049 Corchorus olitorius HOM05D006584 ORTHO05D007640 1.7e-63 246.9 192 65.1
Migut.A00139 Erythranthe guttata HOM05D006584 ORTHO05D007640 2.3e-63 246.5 176 67.6
SalBow4G2021 Salvia bowleyana HOM05D006584 ORTHO05D007640 2.3e-63 246.5 180 67.2
Duzib168G0725 Durio zibethinus HOM05D006584 ORTHO05D007640 5.0e-63 245.4 195 63.6
ClCG05G017800 Citrullus lanatus HOM05D006584 ORTHO05D007640 6.6e-63 245.0 176 67.0
AL6G38030 Arabidopsis lyrata HOM05D006584 ORTHO05D007640 8.6e-63 244.6 176 67.0
CANSAT25G1083 Cannabis sativa HOM05D006584 ORTHO05D007640 8.6e-63 244.6 182 67.6
Nitab4.5_0001584g0100 Nicotiana tabacum HOM05D006584 ORTHO05D007640 8.6e-63 244.6 195 64.1
CsaV3_4G035570 Cucumis sativus L. HOM05D006584 ORTHO05D007640 1.5e-62 243.8 176 66.5
SGA_v2.0_scaffold88G27225 Striga asiatica HOM05D006584 ORTHO05D007640 1.5e-62 243.8 176 66.5
PSO782G5661 Papaver somniferum HOM05D006584 ORTHO05D007640 1.9e-62 243.4 202 60.4
RcHm_v2.0_Chr6g0310741 Rosa chinensis HOM05D006584 ORTHO05D007640 1.9e-62 243.4 176 67.6
Duzib150G0622 Durio zibethinus HOM05D006584 ORTHO05D007640 2.5e-62 243.0 196 62.2
A06p36540 Brassica napus HOM05D006584 ORTHO05D007640 3.3e-62 242.7 207 59.9
BraA06t26580Z Brassica rapa HOM05D006584 ORTHO05D007640 3.3e-62 242.7 207 59.9
AT5G26040 Arabidopsis thaliana HOM05D006584 ORTHO05D007640 5.6e-62 241.9 192 62.0
Carub.0006s2380 Capsella rubella HOM05D006584 ORTHO05D007640 5.6e-62 241.9 176 65.3
FAN20G0896 Fragaria x ananassa HOM05D006584 ORTHO05D007640 5.6e-62 241.9 217 59.0
BolC7t44725H Brassica oleracea HOM05D006584 ORTHO05D007640 7.3e-62 241.5 235 55.3
FvH4_2g32010 Fragaria vesca HOM05D006584 ORTHO05D007640 7.3e-62 241.5 217 58.5
MD08G1043300 Malus domestica HOM05D006584 ORTHO05D007640 7.3e-62 241.5 176 65.3
Aa31LG11G5020 Aethionema arabicum HOM05D006584 ORTHO05D007640 1.2e-61 240.7 217 58.5
C07p41940 Brassica napus HOM05D006584 ORTHO05D007640 1.2e-61 240.7 207 59.4
Sed0000821 Sechium edule HOM05D006584 ORTHO05D007640 1.6e-61 240.4 176 65.3
Solyc08g065350.4 Solanum lycopersicum HOM05D006584 ORTHO05D007640 1.6e-61 240.4 233 56.2
CAN.G181.69 Capsicum annuum HOM05D006584 ORTHO05D007640 2.1e-61 240.0 228 55.7
Lsat_1_v5_gn_3_24361 Lactuca sativa HOM05D006584 ORTHO05D007640 2.1e-61 240.0 179 67.0
THA.LOC104811245 Tarenaya hassleriana HOM05D006584 ORTHO05D007640 2.1e-61 240.0 191 64.4
Sp2g21680 Schrenkiella parvula HOM05D006584 ORTHO05D007640 8.0e-61 238.0 192 61.5
unitig_748.g7524 Utricularia gibba HOM05D006584 ORTHO05D007640 1.4e-60 237.3 161 72.0
Thhalv10004371m.g Eutrema salsugineum HOM05D006584 ORTHO05D007640 5.2e-60 235.3 207 58.5
PSO063G1048 Papaver somniferum HOM05D006584 ORTHO05D007640 4.4e-59 232.3 176 66.5
FAN15G2290 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.2e-58 229.9 249 51.4
EL10Ac2g03896 Beta vulgaris HOM05D006584 ORTHO05D007640 2.0e-56 223.4 166 66.9
AUR62009159 Chenopodium quinoa HOM05D006584 ORTHO05D007640 6.0e-56 221.9 161 68.3
SMO228G0123 Selaginella moellendorffii HOM05D006584 ORTHO05D007640 6.6e-55 218.4 180 60.0
Pp3c16_3940 Physcomitrium patens HOM05D006584 ORTHO05D007640 4.3e-54 215.7 178 59.0
AUR62009158 Chenopodium quinoa HOM05D006584 ORTHO05D007640 7.3e-54 214.9 158 65.8
CBR_g50289 Chara braunii HOM05D006584 ORTHO05D007640 8.0e-53 211.5 177 59.3
Pp3c6_24640 Physcomitrium patens HOM05D006584 ORTHO05D007640 1.2e-51 207.6 178 57.3
Mapoly0007s0200 Marchantia polymorpha HOM05D006584 ORTHO05D007640 4.4e-51 205.7 176 56.8
MELO3C016865.2 Cucumis melo HOM05D006584 ORTHO05D007640 9.8e-51 204.5 177 59.3
AagrBONN_evm.TU.Sc2ySwM_368.1186 Anthoceros agrestis HOM05D006584 ORTHO05D007640 3.9e-47 192.6 173 54.9
Lj8A547G7 Lonicera japonica HOM05D006584 ORTHO05D007640 3.3e-46 189.5 180 55.6
HPP92_026784 Vanilla planifolia HOM05D006584 ORTHO05D007640 6.0e-40 168.7 131 64.1
Hma1.2p1_0482F.1_g162550 Hydrangea macrophylla HOM05D006584 ORTHO05D007640 1.5e-35 154.1 79 89.9
Cpa.g.sc7.166 Carica papaya HOM05D006584 ORTHO05D007640 1.7e-34 150.6 81 82.7
SEGI_11187 Sequoiadendron giganteum HOM05D006584 ORTHO05D007640 9.2e-33 144.8 97 67.0
Zm00001eb385130 Zea mays HOM05D006584 ORTHO05D007640 1.3e-31 141.0 144 52.8
arahy.Tifrunner.gnm1.ann1.GYHR0X Arachis hypogaea HOM05D001150 ORTHO05D007640 6.2e-29 132.1 71 83.1
ATR0716G011 Amborella trichopoda HOM05D006584 ORTHO05D007640 1.1e-28 131.3 99 61.6
Oeu029409.1 Olea europaea HOM05D006584 ORTHO05D007640 6.4e-26 122.1 94 62.8
RcHm_v2.0_Chr4g0398391 Rosa chinensis HOM05D006584 ORTHO05D007640 3.5e-24 116.3 165 42.4
Cre03.g158200 Chlamydomonas reinhardtii HOM05D006584 ORTHO05D007640 6.0e-24 115.5 153 40.5
Lj8A542T15 Lonicera japonica HOM05D006584 ORTHO05D007640 2.5e-22 110.2 59 81.4
AUR62022067 Chenopodium quinoa HOM05D006584 ORTHO05D007640 1.6e-21 107.5 73 65.8
AUR62022066 Chenopodium quinoa HOM05D006584 ORTHO05D007640 2.8e-21 106.7 56 78.6
Haze_18198 Corylus avellana HOM05D006584 ORTHO05D007640 3.4e-19 99.8 140 42.1
RcHm_v2.0_Chr5g0028711 Rosa chinensis HOM05D006584 ORTHO05D007640 3.8e-18 96.3 118 48.3
FAN27G2179 Fragaria x ananassa HOM05D006584 ORTHO05D007640 4.9e-18 95.9 167 38.9
RcHm_v2.0_Chr6g0269981 Rosa chinensis HOM05D006584 ORTHO05D007640 1.3e-10 71.2 45 64.4
RcHm_v2.0_Chr6g0269961 Rosa chinensis HOM05D006584 ORTHO05D007640 1.6e-08 64.3 61 60.7
RcHm_v2.0_Chr5g0034671 Rosa chinensis HOM05D006584 ORTHO05D007640 8.7e-07 58.5 66 43.9


User provided reference genes

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