Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g09945_MAGBIO Magnolia biondii HOM05D007812 ORTHO05D009912 6.3e-30 133.7 78 100.0
Manes.11G025800 Manihot esculenta HOM05D007812 ORTHO05D009912 8.3e-14 80.1 74 68.9
Cpa.g.sc25.43 Carica papaya HOM05D007812 ORTHO05D009912 2.4e-13 78.6 62 77.4
Cfa003579 Carpinus fangiana HOM05D007812 ORTHO05D009912 4.1e-13 77.8 63 77.8
BcaB06g25431 Brassica carinata HOM05D007812 ORTHO05D009912 9.2e-13 76.6 67 73.1
Hma1.2p1_0496F.1_g165840 Hydrangea macrophylla HOM05D007812 ORTHO05D009912 9.2e-13 76.6 62 71.0
CiPaw.02G139600 Carya illinoinensis HOM05D007812 ORTHO05D009912 1.6e-12 75.9 62 77.4
DCAR_016154 Daucus carota HOM05D007812 ORTHO05D009912 5.9e-12 73.9 63 73.0
Sabra03G0024000 Salix brachista HOM05D007812 ORTHO05D009912 7.8e-12 73.6 61 75.4
A05p35560 Brassica napus HOM05D007812 ORTHO05D009912 1.0e-11 73.2 63 76.2
C05p53950 Brassica napus HOM05D007812 ORTHO05D009912 1.0e-11 73.2 63 76.2
BolC5t34061H Brassica oleracea HOM05D007812 ORTHO05D009912 1.0e-11 73.2 63 76.2
BraA05t22365Z Brassica rapa HOM05D007812 ORTHO05D009912 1.0e-11 73.2 63 76.2
Potri.001G196150 Populus trichocarpa HOM05D007812 ORTHO05D009912 1.7e-11 72.4 61 73.8
PGR102G2903 Punica granatum HOM05D007812 ORTHO05D009912 1.7e-11 72.4 62 71.0
Sp3g12050 Schrenkiella parvula HOM05D007812 ORTHO05D009912 2.9e-11 71.6 59 74.6
Thhalv10021887m.g Eutrema salsugineum HOM05D007812 ORTHO05D009912 3.9e-11 71.2 63 74.6
CDE06G1846 Ceratophyllum demersum HOM05D007812 ORTHO05D009912 1.1e-10 69.7 61 67.2
Potri.003G037100 Populus trichocarpa HOM05D007812 ORTHO05D009912 1.5e-10 69.3 61 70.5
CSS0045617 Camellia sinensis var. sinensis HOM05D007812 ORTHO05D009912 1.9e-10 68.9 50 80.0
TPR.G19291 Trifolium pratense HOM05D007812 ORTHO05D009912 3.3e-10 68.2 62 67.7
CARHR088620 Cardamine hirsuta HOM05D007812 ORTHO05D009912 5.6e-10 67.4 64 73.4
Carub.0003s1338 Capsella rubella HOM05D007812 ORTHO05D009912 1.2e-09 66.2 64 71.9
COL.COLO4_30669 Corchorus olitorius HOM05D007812 ORTHO05D009912 1.2e-09 66.2 62 69.4
PSO210G6368 Papaver somniferum HOM05D007812 ORTHO05D009912 2.1e-09 65.5 62 71.0
FAN09G2870 Fragaria x ananassa HOM05D007812 ORTHO05D009912 2.8e-09 65.1 46 82.6
Atru.chr1.3756 Acer truncatum HOM05D007812 ORTHO05D009912 4.7e-09 64.3 74 62.2
Lalb_Chr04g0263241 Lupinus albus HOM05D007812 ORTHO05D009912 4.7e-09 64.3 62 66.1
Aa31LG10G880 Aethionema arabicum HOM05D007812 ORTHO05D009912 6.2e-09 63.9 62 71.0
RcHm_v2.0_Chr2g0143441 Rosa chinensis HOM05D007812 ORTHO05D009912 6.2e-09 63.9 43 88.4
Lj3g0001021 Lotus japonicus HOM05D007812 ORTHO05D009912 8.0e-09 63.5 62 66.1
Zm00001eb270650 Zea mays HOM05D007812 ORTHO05D009912 8.0e-09 63.5 65 60.0
Haze_15960 Corylus avellana HOM05D007812 ORTHO05D009912 1.0e-08 63.2 64 62.5
Migut.D00965 Erythranthe guttata HOM05D007812 ORTHO05D009912 1.0e-08 63.2 63 61.9
SalBow7G0845 Salvia bowleyana HOM05D007812 ORTHO05D009912 1.4e-08 62.8 60 66.7
Hund18713 Selenicereus undatus HOM05D007812 ORTHO05D009912 1.4e-08 62.8 69 58.0
Medtr8g017190 Medicago truncatula HOM05D007812 ORTHO05D009912 2.3e-08 62.0 62 64.5
Nn8g38844 Nelumbo nucifera HOM05D007812 ORTHO05D009912 2.3e-08 62.0 62 64.5
ECA247G3511 Erigeron canadensis HOM05D007812 ORTHO05D009912 3.1e-08 61.6 50 76.0
Ah.03g142930 Amaranthus hybridus HOM05D007812 ORTHO05D009912 4.0e-08 61.2 54 70.4
Ah.08g216270 Amaranthus hybridus HOM05D007812 ORTHO05D009912 4.0e-08 61.2 62 62.9
arahy.Tifrunner.gnm1.ann1.4U9STT Arachis hypogaea HOM05D007812 ORTHO05D009912 5.2e-08 60.8 60 63.3
arahy.Tifrunner.gnm1.ann1.X39S4K Arachis hypogaea HOM05D007812 ORTHO05D009912 6.8e-08 60.5 60 63.3
QL05p012120 Quercus lobata HOM05D007812 ORTHO05D009912 6.8e-08 60.5 42 81.0
TWI31G1317 Tripterygium wilfordii HOM05D007812 ORTHO05D009912 8.9e-08 60.1 61 62.3
ClCG09G000730 Citrullus lanatus HOM05D007812 ORTHO05D009912 2.0e-07 58.9 39 79.5
Psat4g188240 Pisum sativum HOM05D007812 ORTHO05D009912 2.0e-07 58.9 62 62.9
ATR0716G008 Amborella trichopoda HOM05D007812 ORTHO05D009912 3.4e-07 58.2 62 58.1
AL3G25990 Arabidopsis lyrata HOM05D007812 ORTHO05D009912 3.4e-07 58.2 64 65.6
AT3G13845 Arabidopsis thaliana HOM05D007812 ORTHO05D009912 3.4e-07 58.2 64 65.6
Ca_23324_v3 Cicer arietinum L. HOM05D007812 ORTHO05D009912 3.4e-07 58.2 62 58.1
Nitab4.5_0000174g0150 Nicotiana tabacum HOM05D007812 ORTHO05D009912 3.4e-07 58.2 58 62.1
Nitab4.5_0001087g0010 Nicotiana tabacum HOM05D007812 ORTHO05D009912 3.4e-07 58.2 58 62.1
Sed0004047 Sechium edule HOM05D007812 ORTHO05D009912 3.4e-07 58.2 41 80.5
THA.LOC104822637 Tarenaya hassleriana HOM05D007812 ORTHO05D009912 4.4e-07 57.8 59 64.4
MD09G1192600 Malus domestica HOM05D007812 ORTHO05D009912 7.5e-07 57.0 47 78.7
CsaV3_7G034750 Cucumis sativus L. HOM05D007812 ORTHO05D009912 1.3e-06 56.2 36 86.1
Nn1g04968 Nelumbo nucifera HOM05D007812 ORTHO05D009912 1.3e-06 56.2 55 67.3
Nitab4.5_0000255g0170 Nicotiana tabacum HOM05D007812 ORTHO05D009912 1.3e-06 56.2 62 58.1
Eucgr.J02853 Eucalyptus grandis HOM05D007812 ORTHO05D009912 1.7e-06 55.8 62 62.9
Phvul.010G138300 Phaseolus vulgaris HOM05D007812 ORTHO05D009912 1.7e-06 55.8 62 56.5
PGSC0003DMG400004846 Solanum tuberosum HOM05D007812 ORTHO05D009912 2.2e-06 55.5 62 56.5
Ciclev10026913m.g Citrus clementina HOM05D007812 ORTHO05D009912 2.9e-06 55.1 36 86.1
Sc15g0000160 Simmondsia chinensis HOM05D007812 ORTHO05D009912 2.9e-06 55.1 62 56.5
Thecc.06G112400 Theobroma cacao HOM05D007812 ORTHO05D009912 2.9e-06 55.1 36 86.1
Gohir.D05G137100 Gossypium hirsutum HOM05D007812 ORTHO05D009912 3.7e-06 54.7 37 81.1
Gorai.009G141500 Gossypium raimondii HOM05D007812 ORTHO05D009912 3.7e-06 54.7 37 81.1
Cc04_g01890 Coffea canephora HOM05D007812 ORTHO05D009912 4.9e-06 54.3 62 54.8
Glyma.07G009200 Glycine max HOM05D007812 ORTHO05D009912 6.4e-06 53.9 62 59.7
Gohir.A05G135100 Gossypium hirsutum HOM05D007812 ORTHO05D009912 8.3e-06 53.5 36 83.3


User provided reference genes

Program Settings