Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g06822_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D244044 9.9e-92 340.1 173 100.0
MBI08_g12331_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D011388 6.5e-19 98.2 57 86.0
MBI18_g05076_MAGBIO Magnolia biondii HOM05D005026 ORTHO05D005981 5.7e-07 58.5 189 31.2
QL02p011881 Quercus lobata HOM05D000222 ORTHO05D000329 1.3e-06 57.4 60 56.7
Lalb_Chr08g0246171 Lupinus albus HOM05D000222 ORTHO05D000329 1.7e-06 57.0 60 55.0
Dinv39529 Davidia involucrata HOM05D000222 ORTHO05D000329 2.2e-06 56.6 60 56.7
Hma1.2p1_0733F.1_g210310 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 2.2e-06 56.6 61 55.7
Nitab4.5_0000337g0070 Nicotiana tabacum HOM05D000222 ORTHO05D000329 2.2e-06 56.6 60 55.0
Actinidia15430 Actinidia chinensis HOM05D000222 ORTHO05D000329 2.8e-06 56.2 60 55.0
arahy.Tifrunner.gnm1.ann1.P8FSM4 Arachis hypogaea HOM05D000222 ORTHO05D000329 2.8e-06 56.2 60 53.3
arahy.Tifrunner.gnm1.ann1.T76A9L Arachis hypogaea HOM05D000222 ORTHO05D000329 2.8e-06 56.2 60 53.3
MSTRG.25258 Avicennia marina HOM05D000222 ORTHO05D000329 2.8e-06 56.2 60 55.0
DCAR_013875 Daucus carota HOM05D000222 ORTHO05D000329 2.8e-06 56.2 60 53.3
DCAR_023014 Daucus carota HOM05D000222 ORTHO05D000329 2.8e-06 56.2 60 55.0
Nn5g30723 Nelumbo nucifera HOM05D000222 ORTHO05D000329 2.8e-06 56.2 60 55.0
SGA_v2.0_scaffold11G05934 Striga asiatica HOM05D000222 ORTHO05D000329 2.8e-06 56.2 60 55.0
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 3.7e-06 55.8 60 55.0
Cc10_g01540 Coffea canephora HOM05D000222 ORTHO05D000329 3.7e-06 55.8 60 51.7
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 3.7e-06 55.8 60 53.3
SalBow8G4062 Salvia bowleyana HOM05D000222 ORTHO05D000329 3.7e-06 55.8 60 55.0
TPR.G26394 Trifolium pratense HOM05D000222 ORTHO05D000329 3.7e-06 55.8 60 53.3
TAR628G0053 Trochodendron aralioides HOM05D000222 ORTHO05D000329 3.7e-06 55.8 60 53.3
Zm00001eb239320 Zea mays HOM05D000222 ORTHO05D011388 3.7e-06 55.8 60 53.3
Zm00001eb272290 Zea mays HOM05D000222 ORTHO05D000329 3.7e-06 55.8 60 53.3
CANSAT78G1241 Cannabis sativa HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 53.3
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 53.3
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 53.3
Duzib093G0379 Durio zibethinus HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 51.7
Duzib116G0368 Durio zibethinus HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 53.3
Migut.C00851 Erythranthe guttata HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 53.3
Glyma.17G258700 Glycine max HOM05D000222 ORTHO05D000329 4.9e-06 55.5 61 55.7
Gohir.A06G002800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 51.7
Gohir.A06G002900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 51.7
Gohir.D06G005800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 51.7
Gohir.D06G005900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 51.7
Gorai.010G003000 Gossypium raimondii HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 51.7
Lj4C798T7 Lonicera japonica HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 53.3
Lalb_Chr03g0033421 Lupinus albus HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 55.0
Lalb_Chr19g0131441 Lupinus albus HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 55.0
MBI05_g33509_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 55.0
Nitab4.5_0000337g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 55.0
Peaxi162Scf00553g00114 Petunia axillaris HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 55.0
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 4.9e-06 55.5 61 55.7
TAR381G1457 Trochodendron aralioides HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 53.3
TAR536G0015 Trochodendron aralioides HOM05D000222 ORTHO05D000329 4.9e-06 55.5 60 53.3
Atru.chr13.271 Acer truncatum HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
CDE05G2968 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 6.3e-06 55.1 48 68.8
COL.COLO4_26130 Corchorus olitorius HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 51.7
ECA233G5047 Erigeron canadensis HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
FvH4_2g38300 Fragaria vesca HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
FAN15G0622 Fragaria x ananassa HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
FAN20G2674 Fragaria x ananassa HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
FAN27G0624 Fragaria x ananassa HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
Glyma.14G219700 Glycine max HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
Lsat_1_v5_gn_8_30781 Lactuca sativa HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
Lj5g0005976 Lotus japonicus HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
Lalb_Chr11g0061831 Lupinus albus HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
Medtr1g025430 Medicago truncatula HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
RcHm_v2.0_Chr6g0303071 Rosa chinensis HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
Sabra05G0186600 Salix brachista HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
VMungo0647G1547 Vigna mungo HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 53.3
GSVIVG01009931001 Vitis vinifera HOM05D000222 ORTHO05D000329 6.3e-06 55.1 60 51.7
Aa31sc288G10 Aethionema arabicum HOM05D000222 ORTHO05D000329 8.3e-06 54.7 36 75.0
HanXRQChr13g0387091 Helianthus annuus HOM05D000222 ORTHO05D000329 8.3e-06 54.7 60 51.7
Hma1.2p1_0013F.1_g008210 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 8.3e-06 54.7 28 92.9
Os06g0716700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 8.3e-06 54.7 60 51.7
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 8.3e-06 54.7 60 51.7
TWI56G0657 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 8.3e-06 54.7 60 51.7
HPP92_012933 Vanilla planifolia HOM05D000222 ORTHO05D000329 8.3e-06 54.7 60 53.3
Zm00001eb025010 Zea mays HOM05D000222 ORTHO05D011388 8.3e-06 54.7 54 57.4
Zm00001eb346330 Zea mays HOM05D000222 ORTHO05D011388 8.3e-06 54.7 54 57.4
Zm00001eb356570 Zea mays HOM05D000222 ORTHO05D011388 8.3e-06 54.7 54 57.4


User provided reference genes

Program Settings