Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 5.8e-166 587.8 367 100.0
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 8.8e-74 281.6 295 55.6
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 9.8e-73 278.1 299 67.9
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 2.8e-72 276.6 294 53.1
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 6.3e-72 275.4 295 54.2
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 8.3e-72 275.0 295 55.6
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 7.0e-71 271.9 310 58.1
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 1.3e-69 267.7 307 53.1
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 2.9e-69 266.5 315 54.0
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 2.9e-69 266.5 311 55.0
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 3.8e-69 266.2 328 52.4
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 3.8e-69 266.2 298 58.4
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 1.1e-68 264.6 318 51.6
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 1.1e-68 264.6 318 50.9
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 1.5e-68 264.2 263 57.4
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 2.5e-68 263.5 304 58.2
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 2.5e-68 263.5 311 51.8
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 4.2e-68 262.7 315 53.3
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 7.2e-68 261.9 300 55.0
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 1.2e-67 261.2 312 51.6
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 1.2e-67 261.2 297 57.2
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 1.6e-67 260.8 310 51.9
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 2.1e-67 260.4 304 59.2
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 4.7e-67 259.2 297 52.2
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 4.7e-67 259.2 326 49.4
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 8.0e-67 258.5 316 51.3
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 8.0e-67 258.5 308 51.9
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 1.4e-66 257.7 311 52.1
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 3.0e-66 256.5 297 55.2
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 4.0e-66 256.1 206 69.4
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 5.2e-66 255.8 311 50.5
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 6.8e-66 255.4 307 51.5
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 8.9e-66 255.0 313 50.8
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 8.9e-66 255.0 209 67.0
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 1.2e-65 254.6 323 49.8
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 1.2e-65 254.6 305 57.4
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 1.2e-65 254.6 328 47.6
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 1.2e-65 254.6 305 52.8
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 1.5e-65 254.2 307 53.4
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 2.6e-65 253.4 299 52.8
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 3.4e-65 253.1 297 51.5
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 4.4e-65 252.7 206 68.0
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 5.7e-65 252.3 310 50.0
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 5.7e-65 252.3 295 51.9
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 2.8e-64 250.0 310 50.0
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 2.8e-64 250.0 323 55.1
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.8e-63 247.3 311 48.9
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.8e-63 247.3 311 48.9
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 3.1e-63 246.5 311 48.9
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 7.0e-63 245.4 311 48.6
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 5.9e-62 242.3 312 48.7
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 5.9e-62 242.3 329 46.5
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 7.8e-62 241.9 329 51.1
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 2.3e-61 240.4 253 54.2
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 2.9e-61 240.0 253 53.8
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 3.8e-61 239.6 318 52.2
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 5.0e-61 239.2 344 45.9
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 6.6e-61 238.8 307 51.5
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 1.1e-60 238.0 308 57.5
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 4.3e-60 236.1 308 45.8
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.6e-59 234.2 315 46.7
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 1.6e-59 234.2 278 51.8
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 2.8e-59 233.4 299 47.5
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 3.6e-59 233.0 320 45.9
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 4.7e-59 232.6 356 44.7
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 8.0e-59 231.9 310 55.8
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 8.0e-59 231.9 310 55.8
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 1.4e-58 231.1 321 51.4
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 1.4e-58 231.1 306 54.6
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 2.3e-58 230.3 279 50.9
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 5.2e-58 229.2 206 65.0
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 6.8e-58 228.8 279 50.5
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 1.2e-57 228.0 320 48.4
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 1.5e-57 227.6 206 60.7
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 1.5e-57 227.6 316 45.9
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 5.7e-57 225.7 279 50.5
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 7.5e-57 225.3 309 46.3
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 9.8e-57 224.9 283 50.2
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 2.9e-56 223.4 207 60.4
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 2.9e-56 223.4 195 63.1
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 6.4e-56 222.2 316 45.6
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 6.4e-56 222.2 270 48.5
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 6.4e-56 222.2 317 54.3
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 8.3e-56 221.9 302 48.7
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 1.1e-55 221.5 318 51.9
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 1.2e-54 218.0 308 58.4
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 1.6e-54 217.6 272 50.4
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 2.0e-54 217.2 261 49.4
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 2.7e-54 216.9 315 44.8
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 6.0e-54 215.7 313 44.1
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 1.0e-53 214.9 316 56.3
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 1.7e-53 214.2 317 43.8
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 2.3e-53 213.8 355 40.8
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 2.3e-53 213.8 355 40.8
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 5.0e-53 212.6 317 47.6
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 6.6e-53 212.2 279 47.3
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 8.6e-53 211.8 317 47.6
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 1.9e-52 210.7 328 51.5
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 2.5e-52 210.3 253 47.0
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 5.6e-52 209.1 264 58.7
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.6e-51 207.6 295 44.4
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 1.8e-50 204.1 188 59.0
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 1.8e-50 204.1 188 59.0
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 5.2e-50 202.6 206 55.8
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 5.2e-50 202.6 206 55.8
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 5.2e-50 202.6 297 44.1
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 2.2e-48 197.2 310 52.6
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 3.7e-48 196.4 317 41.3
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 1.1e-47 194.9 183 59.6
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.9e-47 194.1 295 44.4
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 2.0e-46 190.7 173 62.4
Zm00001eb422940 Zea mays HOM05D002737 ORTHO05D005828 3.5e-46 189.9 251 48.2
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 1.0e-45 188.3 246 45.9
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 2.8e-43 180.3 211 51.7
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 3.1e-42 176.8 228 48.2
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 3.1e-42 176.8 336 38.1
HanXRQChr03g0065531 Helianthus annuus HOM05D002737 ORTHO05D005828 2.2e-40 170.6 219 61.2
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 4.9e-40 169.5 194 50.5
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 8.3e-40 168.7 310 47.7
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 7.1e-39 165.6 157 60.5
CiPaw.13G131400 Carya illinoinensis HOM05D002737 ORTHO05D005828 2.1e-38 164.1 240 44.2
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 3.5e-38 163.3 201 49.8
CBR_g45752 Chara braunii HOM05D002737 ORTHO05D005828 1.0e-37 161.8 187 51.9
Os04g0440000 Oryza sativa ssp. japonica HOM05D002737 ORTHO05D005828 1.3e-37 161.4 262 42.0
CBR_g6328 Chara braunii HOM05D002737 ORTHO05D005828 1.9e-36 157.5 156 57.1
AUR62037790 Chenopodium quinoa HOM05D002737 ORTHO05D005828 5.8e-33 146.0 205 46.8
AUR62018224 Chenopodium quinoa HOM05D002737 ORTHO05D005828 1.7e-32 144.4 94 76.6
Cre17.g734000 Chlamydomonas reinhardtii HOM05D002737 ORTHO05D005828 2.2e-32 144.1 155 49.0
CARHR119800 Cardamine hirsuta HOM05D002737 ORTHO05D005828 8.4e-32 142.1 169 50.3
MCO06G117 Micromonas commoda HOM05D002737 ORTHO05D005828 1.2e-30 138.3 171 48.5
Actinidia24241 Actinidia chinensis HOM05D002737 ORTHO05D005828 6.0e-30 136.0 177 46.3
QL07p000693 Quercus lobata HOM05D002737 ORTHO05D009499 3.0e-29 133.7 144 53.5
Migut.D02413 Erythranthe guttata HOM05D002737 ORTHO05D005828 5.6e-28 129.4 202 41.6
Gohir.D05G081600 Gossypium hirsutum HOM05D002737 ORTHO05D005828 2.0e-25 120.9 278 36.0
Actinidia24240 Actinidia chinensis HOM05D002737 ORTHO05D005828 7.6e-25 119.0 98 64.3
Potri.004G201300 Populus trichocarpa HOM05D002737 ORTHO05D005828 3.8e-24 116.7 261 43.3
FAN28G1974 Fragaria x ananassa HOM05D002737 ORTHO05D005828 7.8e-22 109.0 106 56.6
Lalb_Chr06g0164021 Lupinus albus HOM05D002737 ORTHO05D005828 6.6e-21 105.9 107 54.2
SHI06201 Sapria himalayana HOM05D002737 ORTHO05D005828 2.8e-19 100.5 82 65.9
Migut.D02400 Erythranthe guttata HOM05D002737 ORTHO05D005828 2.0e-17 94.4 310 30.3
Oeu025863.1 Olea europaea HOM05D002737 ORTHO05D005828 6.4e-16 89.4 85 60.0
MD01G1023000 Malus domestica HOM05D002737 ORTHO05D005828 7.1e-15 85.9 62 67.7
CSS0037550 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 1.6e-14 84.7 99 50.5
AagrBONN_evm.TU.Sc2ySwM_368.3239 Anthoceros agrestis HOM05D002737 ORTHO05D005828 4.6e-14 83.2 75 62.7
QL07p000753 Quercus lobata HOM05D002737 ORTHO05D005828 3.9e-13 80.1 57 70.2
arahy.Tifrunner.gnm1.ann1.K04YXN Arachis hypogaea HOM05D002737 ORTHO05D023756 1.2e-09 68.6 43 72.1
arahy.Tifrunner.gnm1.ann1.G9FM3T Arachis hypogaea HOM05D002737 ORTHO05D005828 1.5e-09 68.2 81 50.6
AagrBONN_evm.TU.Sc2ySwM_368.3190 Anthoceros agrestis HOM05D000001 ORTHO05D072262 5.8e-09 66.2 53 67.9
Rhsim13G0195400 Rhododendron simsii HOM05D002737 ORTHO05D005828 4.6e-06 56.6 125 41.6
arahy.Tifrunner.gnm1.ann1.0K86JE Arachis hypogaea HOM05D002737 ORTHO05D005828 6.0e-06 56.2 238 27.7


User provided reference genes

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