Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.3e-51 206.1 102 100.0
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.7e-49 198.4 101 96.0
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 3.6e-49 198.0 101 96.0
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.1e-47 193.0 98 96.9
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 2.4e-21 105.5 80 63.8
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 7.0e-21 104.0 92 60.9
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 9.2e-21 103.6 102 54.9
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 2.0e-20 102.4 97 52.6
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 1.0e-19 100.1 96 52.1
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 1.3e-19 99.8 80 58.8
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 1.7e-19 99.4 79 57.0
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 2.9e-19 98.6 89 50.6
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 3.8e-19 98.2 98 49.0
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 6.6e-19 97.4 96 49.0
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 1.9e-18 95.9 97 51.5
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 4.3e-18 94.7 79 58.2
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 5.6e-18 94.4 96 49.0
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 7.3e-18 94.0 79 54.4
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 1.6e-17 92.8 82 54.9
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 1.6e-17 92.8 96 46.9
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 2.1e-17 92.4 97 49.5
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 4.7e-17 91.3 99 45.5
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 6.1e-17 90.9 98 50.0
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 6.1e-17 90.9 94 46.8
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 8.0e-17 90.5 78 56.4
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 1.4e-16 89.7 97 47.4
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 1.4e-16 89.7 96 47.9
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 1.8e-16 89.4 96 49.0
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 2.3e-16 89.0 96 47.9
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 2.3e-16 89.0 81 44.4
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 4.0e-16 88.2 85 51.8
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 4.0e-16 88.2 79 50.6
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 5.2e-16 87.8 97 47.4
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 5.2e-16 87.8 96 46.9
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 6.8e-16 87.4 77 55.8
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 6.8e-16 87.4 80 51.2
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 6.8e-16 87.4 98 39.8
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 8.9e-16 87.0 97 47.4
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 8.9e-16 87.0 80 52.5
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 8.9e-16 87.0 79 50.6
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.2e-15 86.7 97 46.4
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 1.2e-15 86.7 74 55.4
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 2.0e-15 85.9 81 49.4
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 2.0e-15 85.9 80 50.0
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 2.0e-15 85.9 79 50.6
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 2.0e-15 85.9 97 45.4
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 2.6e-15 85.5 79 49.4
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 2.6e-15 85.5 81 48.1
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 2.6e-15 85.5 79 51.9
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 3.4e-15 85.1 78 53.8
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 3.4e-15 85.1 83 47.0
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 4.4e-15 84.7 80 50.0
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 4.4e-15 84.7 80 52.5
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 5.8e-15 84.3 79 50.6
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 7.5e-15 84.0 77 50.6
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 7.5e-15 84.0 98 43.9
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 9.8e-15 83.6 81 50.6
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 9.8e-15 83.6 86 48.8
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 9.8e-15 83.6 97 44.3
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 1.3e-14 83.2 80 51.2
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 3.7e-14 81.6 97 43.3
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 1.4e-13 79.7 80 51.2
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 1.4e-13 79.7 83 44.6
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 9.2e-13 77.0 96 45.8
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 1.6e-12 76.3 86 40.7
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 1.6e-12 76.3 79 44.3
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 2.7e-12 75.5 79 49.4
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 3.5e-12 75.1 76 40.8
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 4.6e-12 74.7 97 38.1
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 6.0e-12 74.3 83 48.2
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 7.8e-12 73.9 79 43.0
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 7.8e-12 73.9 78 50.0
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 7.8e-12 73.9 79 49.4
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 1.0e-11 73.6 79 46.8
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 1.0e-11 73.6 79 46.8
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 1.0e-11 73.6 79 48.1
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 1.0e-11 73.6 79 48.1
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 1.7e-11 72.8 100 43.0
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 2.3e-11 72.4 79 48.1
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 2.3e-11 72.4 79 46.8
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 2.3e-11 72.4 79 48.1
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 3.0e-11 72.0 82 43.9
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 3.9e-11 71.6 84 45.2
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 5.0e-11 71.2 94 42.6
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 5.0e-11 71.2 75 49.3
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 2.5e-10 68.9 79 43.0
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 2.5e-10 68.9 76 44.7
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 3.3e-10 68.6 81 43.2
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 3.3e-10 68.6 81 43.2
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 4.3e-10 68.2 79 46.8
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 5.6e-10 67.8 79 44.3
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 9.5e-10 67.0 78 44.9
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 1.6e-09 66.2 84 46.4
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 2.1e-09 65.9 81 43.2
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 1.4e-08 63.2 78 44.9
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 1.8e-08 62.8 89 38.2
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.5e-07 59.7 77 40.3
SEGI_11751 Sequoiadendron giganteum HOM05D007246 ORTHO05D009066 2.6e-07 58.9 91 31.9
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 2.6e-07 58.9 75 41.3
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 3.7e-06 55.1 79 43.0
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 8.3e-06 53.9 83 41.0


User provided reference genes

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