Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju99C0T4 Lonicera japonica HOM05D014049 ORTHO05D013593 8.0e-85 317.0 154 100.0
Lju99P3T21 Lonicera japonica HOM05D014049 ORTHO05D013593 3.3e-62 241.9 156 78.2
Lju99C2G6 Lonicera japonica HOM05D000097 ORTHO05D000041 5.2e-52 208.0 127 82.7
Lj9A232T19 Lonicera japonica HOM05D014049 ORTHO05D013593 2.6e-51 205.7 123 85.4
Lju99C2T7 Lonicera japonica HOM05D014049 ORTHO05D013593 1.7e-50 203.0 123 84.6
Lju99P1T24 Lonicera japonica HOM05D014049 ORTHO05D013593 2.0e-48 196.1 133 75.9
Lj9C234G4 Lonicera japonica HOM05D000097 ORTHO05D000041 5.0e-47 191.4 124 79.8
Lju99A5G37 Lonicera japonica HOM05D014049 ORTHO05D000041 3.3e-46 188.7 123 78.9
Lj9P231T33 Lonicera japonica HOM05D014049 ORTHO05D013593 6.2e-45 184.5 123 77.2
Lju99C4T5 Lonicera japonica HOM05D014049 ORTHO05D013593 6.2e-29 131.3 83 83.1
Lj3C929T0 Lonicera japonica HOM05D000097 ORTHO05D000041 3.3e-22 109.0 119 49.6
Lj6A385G50 Lonicera japonica HOM05D000097 ORTHO05D000041 1.3e-13 80.5 105 41.9
Dinv13269 Davidia involucrata HOM05D000097 ORTHO05D000041 2.1e-13 79.7 144 37.5
Lj6A388G43 Lonicera japonica HOM05D000097 ORTHO05D000041 3.6e-13 79.0 109 42.2
vmacro10274 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.4e-12 76.3 114 43.0
Lj6A386G19 Lonicera japonica HOM05D014049 ORTHO05D000001 3.1e-12 75.9 105 41.9
Dinv09595 Davidia involucrata HOM05D000097 ORTHO05D000041 2.0e-11 73.2 136 36.0
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 3.4e-11 72.4 131 39.7
Dinv23999 Davidia involucrata HOM05D000097 ORTHO05D000041 5.8e-11 71.6 122 36.9
Dinv13264 Davidia involucrata HOM05D014049 ORTHO05D013593 1.7e-10 70.1 132 35.6
Ciclev10013389m.g Citrus clementina HOM05D014049 ORTHO05D000001 2.9e-10 69.3 102 35.3
Dinv13270 Davidia involucrata HOM05D002148 ORTHO05D013593 4.9e-10 68.6 122 41.8
Dinv00959 Davidia involucrata HOM05D000097 ORTHO05D000041 6.4e-10 68.2 114 36.8
Dinv07199 Davidia involucrata HOM05D000097 ORTHO05D000041 1.1e-09 67.4 142 33.1
Hma1.2p1_2656F.1_g326290 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.1e-09 67.4 120 34.2
Dinv02040 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-09 67.0 125 36.0
Dinv13260 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-09 67.0 114 36.0
Dinv15019 Davidia involucrata HOM05D000097 ORTHO05D000041 1.9e-09 66.6 115 35.7
Dinv23993 Davidia involucrata HOM05D000097 ORTHO05D000041 1.9e-09 66.6 125 35.2
Dinv09594 Davidia involucrata HOM05D000097 ORTHO05D000041 3.2e-09 65.9 132 30.3
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.2e-09 65.9 119 34.5
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.2e-09 65.5 146 31.5
Dinv09586 Davidia involucrata HOM05D000097 ORTHO05D013593 5.5e-09 65.1 121 38.8
Dinv13259 Davidia involucrata HOM05D000097 ORTHO05D000041 5.5e-09 65.1 119 37.8
Dinv13278 Davidia involucrata HOM05D000097 ORTHO05D000041 5.5e-09 65.1 119 37.8
Dinv00709 Davidia involucrata HOM05D000097 ORTHO05D000041 9.3e-09 64.3 126 34.9
Hma1.2p1_2243F.1_g317900 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 6.0e-08 61.6 107 33.6
Rhsim03G0102500 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.0e-08 61.6 109 32.1
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.9e-08 61.2 119 31.9
HanXRQChr01g0028891 Helianthus annuus HOM05D000097 ORTHO05D000041 7.9e-08 61.2 107 32.7
Hma1.2p1_1497F.1_g287070 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 7.9e-08 61.2 116 32.8
Lj6A388G44 Lonicera japonica HOM05D000097 ORTHO05D000041 7.9e-08 61.2 88 37.5
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.0e-07 60.8 126 30.2
Rhsim02G0101900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-07 60.5 108 33.3
Peaxi162Scf00226g00923 Petunia axillaris HOM05D000097 ORTHO05D000041 1.8e-07 60.1 120 33.3
vmacro10270 Vaccinium macrocarpon HOM05D000097 ORTHO05D013593 1.8e-07 60.1 90 40.0
Dinv02033 Davidia involucrata HOM05D000097 ORTHO05D000041 2.3e-07 59.7 108 37.0
Peaxi162Scf00226g00936 Petunia axillaris HOM05D000097 ORTHO05D000041 2.3e-07 59.7 112 33.9
Hma1.2p1_1497F.1_g287050 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 3.0e-07 59.3 119 32.8
Hma1.2p1_2656F.1_g326340 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 3.0e-07 59.3 119 32.8
Rhsim03G0104500 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.0e-07 59.3 108 33.3
Dinv02034 Davidia involucrata HOM05D000097 ORTHO05D000041 3.9e-07 58.9 105 41.9
Dinv11854 Davidia involucrata HOM05D000097 ORTHO05D000041 5.1e-07 58.5 109 37.6
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.7e-07 58.2 111 28.8
Dinv02036 Davidia involucrata HOM05D000097 ORTHO05D000041 6.7e-07 58.2 138 30.4
Rhsim03G0102900 Rhododendron simsii HOM05D032117 ORTHO05D000041 6.7e-07 58.2 108 31.5
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.7e-07 57.8 123 30.9
HanXRQChr09g0244201 Helianthus annuus HOM05D000097 ORTHO05D000041 8.7e-07 57.8 107 32.7
Rhsim03G0044400 Rhododendron simsii HOM05D000097 ORTHO05D000041 8.7e-07 57.8 108 33.3
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.7e-07 57.8 118 32.2
CSS0003715 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.1e-06 57.4 116 32.8
Nitab4.5_0003025g0010 Nicotiana tabacum HOM05D000097 ORTHO05D000041 1.5e-06 57.0 98 34.7
SHI16346 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.0 116 32.8
SHI16766 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.0 124 31.5
Solyc05g041570.3 Solanum lycopersicum HOM05D000097 ORTHO05D013868 1.5e-06 57.0 109 34.9
Atru.chr7.1131 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-06 56.6 121 33.9
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 1.9e-06 56.6 121 28.9
ECA238G0255 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.9e-06 56.6 149 30.2
Lsat_1_v5_gn_6_85720 Lactuca sativa HOM05D000097 ORTHO05D000041 2.5e-06 56.2 115 30.4
Rhsim03G0047300 Rhododendron simsii HOM05D000097 ORTHO05D000041 5.6e-06 55.1 108 33.3
vmacro07236 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 5.6e-06 55.1 100 34.0
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.4e-06 54.7 114 26.3


User provided reference genes

Program Settings