Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju926C3T3 Lonicera japonica HOM05D000004 ORTHO05D000002 2.1e-61 238.8 117 100.0
Lj9P307T30 Lonicera japonica HOM05D000004 ORTHO05D000002 1.9e-25 119.4 113 49.6
Lj3C465G7 Lonicera japonica HOM05D000004 ORTHO05D000002 1.5e-19 99.8 96 50.0
Lj6C428T2 Lonicera japonica HOM05D000004 ORTHO05D000002 1.5e-19 99.8 79 58.2
Lj6C451T1 Lonicera japonica HOM05D000004 ORTHO05D000002 7.5e-19 97.4 112 43.8
Lj6C258T1 Lonicera japonica HOM05D000004 ORTHO05D000002 3.5e-16 88.6 95 40.0
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 3.0e-15 85.5 112 41.1
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 3.9e-15 85.1 112 41.1
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 6.6e-15 84.3 117 41.0
Lj2C174T26 Lonicera japonica HOM05D000004 ORTHO05D000002 5.6e-14 81.3 113 40.7
Lj6C267T0 Lonicera japonica HOM05D000004 ORTHO05D000002 4.7e-13 78.2 85 40.0
PSO384G4983 Papaver somniferum HOM05D000004 ORTHO05D000002 8.9e-12 73.9 113 36.3
PSO675G0415 Papaver somniferum HOM05D000004 ORTHO05D000002 8.9e-12 73.9 110 39.1
PSO017G3809 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-11 72.4 109 37.6
PSO782G3295 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-11 72.4 113 39.8
PSO832G2519 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-11 71.6 114 36.0
PSO478G3389 Papaver somniferum HOM05D000004 ORTHO05D000002 7.5e-11 70.9 108 37.0
PSO017G3137 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-10 70.1 109 39.4
PSO339G2167 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-10 69.7 112 33.0
PSO591G0288 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-10 69.7 113 38.1
PSO170G4312 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-10 69.3 110 36.4
PSO782G1435 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-10 68.9 110 34.5
PSO170G6409 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-10 68.6 112 34.8
PSO675G3806 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-10 68.6 110 34.5
PSO063G0887 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-10 68.2 113 33.6
PSO384G4066 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-10 68.2 110 34.5
PSO478G1420 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-10 68.2 110 31.8
PSO782G2184 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-10 68.2 110 35.5
PSO339G1576 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-10 67.8 108 34.3
PSO541G2724 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-10 67.8 113 36.3
PSO782G0036 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-10 67.8 112 34.8
PSO832G2085 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-10 67.8 111 35.1
Lj4C43T7 Lonicera japonica HOM05D000004 ORTHO05D000002 8.3e-10 67.4 102 38.2
AUR62002516 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.1e-09 67.0 120 35.8
Lj5C185T14 Lonicera japonica HOM05D000004 ORTHO05D000002 1.1e-09 67.0 44 70.5
Lj6C568T2 Lonicera japonica HOM05D000004 ORTHO05D000002 1.1e-09 67.0 44 70.5
PSO528G0059 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-09 67.0 114 34.2
PSO782G0737 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-09 67.0 115 34.8
Lj4C85T15 Lonicera japonica HOM05D000004 ORTHO05D000002 1.4e-09 66.6 102 33.3
PSO170G5011 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-09 66.6 113 34.5
PSO478G1373 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-09 66.6 110 32.7
PSO541G3617 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-09 66.6 110 35.5
Rhsim11G0093400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.4e-09 66.6 115 33.9
PSO081G0100 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-09 66.2 110 33.6
PSO170G0666 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-09 66.2 110 36.4
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-09 66.2 112 33.0
Rhsim12G0205800 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.4e-09 65.9 112 34.8
Rhsim13G0092800 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.4e-09 65.9 112 34.8
PSO111G0026 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-09 65.5 110 31.8
Os06g0170800 Oryza sativa ssp. japonica HOM05D000004 ORTHO05D000002 4.1e-09 65.1 111 32.4
PSO017G2783 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-09 65.1 114 36.0
PSO063G2309 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-09 65.1 109 36.7
PSO384G1135 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-09 65.1 110 33.6
PSO063G6355 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-09 64.7 115 33.9
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 5.4e-09 64.7 113 35.4
PSO461G0041 Papaver somniferum HOM05D000004 ORTHO05D000002 7.1e-09 64.3 110 33.6
PSO675G9204 Papaver somniferum HOM05D000004 ORTHO05D000002 7.1e-09 64.3 109 33.0
Lj9A701T57 Lonicera japonica HOM05D000004 ORTHO05D000002 9.2e-09 63.9 60 56.7
PSO017G2622 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-09 63.9 113 33.6
PSO478G0230 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-09 63.9 111 35.1
PSO675G0192 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-09 63.9 113 33.6
PSO675G3155 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-09 63.9 110 34.5
PSO782G3890 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-08 63.5 113 31.9
PSO017G1409 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-08 63.2 110 35.5
PSO675G9263 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-08 63.2 115 34.8
PSO782G1706 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-08 63.2 110 32.7
PSO782G2610 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-08 63.2 110 34.5
TPR.G32498 Trifolium pratense HOM05D000004 ORTHO05D000002 1.6e-08 63.2 124 33.9
PSO063G3333 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-08 62.4 110 31.8
PSO478G3301 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-08 62.4 110 32.7
PSO170G4176 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-08 61.6 113 32.7
PSO210G0982 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-08 61.6 110 32.7
PSO210G0641 Papaver somniferum HOM05D000004 ORTHO05D000002 6.0e-08 61.2 110 34.5
PSO339G1921 Papaver somniferum HOM05D000004 ORTHO05D000002 6.0e-08 61.2 113 31.9
PSO541G0720 Papaver somniferum HOM05D000004 ORTHO05D000002 6.0e-08 61.2 110 30.9
Atru.chr12.2292 Acer truncatum HOM05D000004 ORTHO05D000002 7.8e-08 60.8 112 32.1
PSO063G7453 Papaver somniferum HOM05D000004 ORTHO05D000002 7.8e-08 60.8 110 31.8
PSO384G1485 Papaver somniferum HOM05D000004 ORTHO05D000002 7.8e-08 60.8 116 32.8
PSO210G7166 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-07 60.5 110 31.8
RhsimUnG0031100 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.0e-07 60.5 118 30.5
CANSAT54G0535 Cannabis sativa HOM05D000004 ORTHO05D000002 1.3e-07 60.1 117 34.2
PSO170G1496 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 60.1 110 32.7
Psat4g130440 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-07 60.1 114 30.7
Rhsim09G0107500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.3e-07 60.1 110 33.6
Nn1g03655 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.7e-07 59.7 113 34.5
PSO339G1491 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-07 59.7 113 32.7
PSO339G1607 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-07 59.7 109 33.9
PSO160G0001 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-07 59.3 110 31.8
PSO754G0085 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-07 59.3 110 31.8
PSO801G0540 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-07 59.3 110 30.9
COL.COLO4_03641 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.0e-07 58.9 114 28.1
PSO063G0124 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-07 58.9 114 32.5
PSO063G6712 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-07 58.9 114 33.3
ECA234G4361 Erigeron canadensis HOM05D000222 ORTHO05D000329 3.9e-07 58.5 127 31.5
Hma1.2p1_1778F.1_g302030 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.9e-07 58.5 108 30.6
PSO063G2072 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 113 34.5
PSO170G1160 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 113 31.9
PSO170G5535 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 110 32.7
PSO478G3781 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 110 33.6
PSO541G1232 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 110 35.5
PSO782G4277 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 110 34.5
PSO832G4329 Papaver somniferum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 111 31.5
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 3.9e-07 58.5 118 31.4
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-07 58.5 115 32.2
Hma1.2p1_0446F.1_g154680 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.1e-07 58.2 110 31.8
PSO339G6040 Papaver somniferum HOM05D000004 ORTHO05D000002 5.1e-07 58.2 114 31.6
PSO764G0190 Papaver somniferum HOM05D000004 ORTHO05D000002 5.1e-07 58.2 110 27.3
Rhsim01G0082200 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.1e-07 58.2 113 31.9
Rhsim13G0093200 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.1e-07 58.2 108 31.5
Sopen03g009060 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-07 58.2 113 27.4
Lj4C831G13 Lonicera japonica HOM05D000004 ORTHO05D000002 6.6e-07 57.8 42 64.3
PSO210G7106 Papaver somniferum HOM05D000004 ORTHO05D000002 6.6e-07 57.8 99 36.4
Psat6g093200 Pisum sativum HOM05D000004 ORTHO05D000002 6.6e-07 57.8 118 30.5
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 8.6e-07 57.4 116 32.8
Nn6g33901 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.6e-07 57.4 114 35.1
PSO170G3746 Papaver somniferum HOM05D000004 ORTHO05D000002 8.6e-07 57.4 110 30.9
PSO541G3547 Papaver somniferum HOM05D000004 ORTHO05D000002 8.6e-07 57.4 110 32.7
Psat1g096400 Pisum sativum HOM05D000004 ORTHO05D022215 8.6e-07 57.4 114 30.7
Psat1g111280 Pisum sativum HOM05D000004 ORTHO05D000002 8.6e-07 57.4 119 30.3
Psat5g117920 Pisum sativum HOM05D000004 ORTHO05D000002 8.6e-07 57.4 119 30.3
Psat5g213880 Pisum sativum HOM05D000004 ORTHO05D000002 8.6e-07 57.4 118 31.4
Psat5g235280 Pisum sativum HOM05D000004 ORTHO05D017104 8.6e-07 57.4 119 30.3
Psat6g181280 Pisum sativum HOM05D000004 ORTHO05D017104 8.6e-07 57.4 114 27.2
PSO170G6288 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.0 114 32.5
PSO675G8662 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.0 114 31.6
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-06 57.0 115 33.0
TPR.G21395 Trifolium pratense HOM05D000004 ORTHO05D000002 1.1e-06 57.0 120 30.0
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 1.1e-06 57.0 120 30.8
PSO017G0431 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.6 109 31.2
PSO063G2480 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.6 113 31.9
CSS0019420 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-06 56.2 115 33.0
PSO170G4770 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 56.2 110 31.8
SHI02827 Sapria himalayana HOM05D000004 ORTHO05D000002 1.9e-06 56.2 115 31.3
Lalb_Chr12g0204591 Lupinus albus HOM05D000004 ORTHO05D000002 2.5e-06 55.8 106 34.0
Psat2g046080 Pisum sativum HOM05D000004 ORTHO05D000002 3.3e-06 55.5 118 30.5
Psat6g224520 Pisum sativum HOM05D000004 ORTHO05D000002 3.3e-06 55.5 117 29.9
Rhsim06G0107000 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.3e-06 55.5 113 31.9
Sopen04g007630 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-06 55.5 113 27.4
FvH4_3g30933 Fragaria vesca HOM05D000004 ORTHO05D000002 4.3e-06 55.1 115 28.7
CAN.G955.5 Capsicum annuum HOM05D000004 ORTHO05D000002 5.6e-06 54.7 116 27.6
AUR62037042 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.6e-06 54.7 126 32.5
Lj4C52G9 Lonicera japonica HOM05D000004 ORTHO05D000002 5.6e-06 54.7 47 46.8
PSO675G0046 Papaver somniferum HOM05D000004 ORTHO05D000002 5.6e-06 54.7 117 31.6
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 7.3e-06 54.3 114 32.5
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 7.3e-06 54.3 114 32.5
Hma1.2p1_0487F.1_g163610 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.3e-06 54.3 46 50.0
PSO210G6275 Papaver somniferum HOM05D000004 ORTHO05D000002 7.3e-06 54.3 64 39.1
COL.COLO4_36542 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.5e-06 53.9 114 29.8
Psat6g022520 Pisum sativum HOM05D000004 ORTHO05D000002 9.5e-06 53.9 126 30.2
Psat6g169080 Pisum sativum HOM05D000004 ORTHO05D000002 9.5e-06 53.9 126 30.2
Rhsim09G0000300 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.5e-06 53.9 110 32.7
Rhsim13G0234900 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.5e-06 53.9 110 32.7
Sopen09g024920 Solanum pennellii HOM05D000004 ORTHO05D000002 9.5e-06 53.9 113 26.5


User provided reference genes

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