Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju50E10G0 Lonicera japonica HOM05D002928 ORTHO05D034233 2.1e-68 262.3 141 100.0
Actinidia38670 Actinidia chinensis HOM05D002928 ORTHO05D003794 2.2e-41 172.6 151 69.5
Lj1C1019G10 Lonicera japonica HOM05D002928 ORTHO05D003794 1.4e-40 169.9 151 69.5
Rhsim01G0028300 Rhododendron simsii HOM05D002928 ORTHO05D003794 1.9e-40 169.5 151 67.5
vmacro16797 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 4.2e-40 168.3 151 67.5
Actinidia24380 Actinidia chinensis HOM05D002928 ORTHO05D003794 9.3e-40 167.2 150 67.3
Dinv42848 Davidia involucrata HOM05D002928 ORTHO05D003794 9.3e-40 167.2 150 67.3
Dinv43252 Davidia involucrata HOM05D002928 ORTHO05D003794 9.3e-40 167.2 150 67.3
Nitab4.5_0002891g0050 Nicotiana tabacum HOM05D002928 ORTHO05D003794 6.7e-38 161.0 150 68.7
Nitab4.5_0008875g0030 Nicotiana tabacum HOM05D002928 ORTHO05D003794 6.7e-38 161.0 150 68.7
Potri.018G105900 Populus trichocarpa HOM05D002928 ORTHO05D003794 6.7e-38 161.0 151 66.9
Oeu054272.1 Olea europaea HOM05D002928 ORTHO05D003794 8.7e-38 160.6 149 65.1
ECA248G1996 Erigeron canadensis HOM05D002928 ORTHO05D003794 1.5e-37 159.8 151 64.2
Peaxi162Scf00643g00413 Petunia axillaris HOM05D002928 ORTHO05D003794 1.5e-37 159.8 140 72.1
THA.LOC104803542 Tarenaya hassleriana HOM05D002928 ORTHO05D003794 1.5e-37 159.8 151 64.2
MSTRG.19654 Avicennia marina HOM05D002928 ORTHO05D003794 1.9e-37 159.5 149 65.1
TAR383G0178 Trochodendron aralioides HOM05D002928 ORTHO05D003794 1.9e-37 159.5 150 65.3
vmacro05439 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 1.9e-37 159.5 151 65.6
SalBow1G3419 Salvia bowleyana HOM05D002928 ORTHO05D003794 3.3e-37 158.7 152 66.4
CSS0004317 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 5.7e-37 157.9 151 64.2
CSS0014470 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 5.7e-37 157.9 151 64.2
Migut.J01351 Erythranthe guttata HOM05D002928 ORTHO05D003794 5.7e-37 157.9 153 64.1
Duzib187G0297 Durio zibethinus HOM05D002928 ORTHO05D003794 7.4e-37 157.5 150 64.7
Lj1C1017T2 Lonicera japonica HOM05D002928 ORTHO05D003794 7.4e-37 157.5 172 59.9
Manes.06G034500 Manihot esculenta HOM05D002928 ORTHO05D003794 7.4e-37 157.5 149 65.1
MELO3C004130.2 Cucumis melo HOM05D002928 ORTHO05D003794 9.6e-37 157.1 151 62.9
CiPaw.15G167900 Carya illinoinensis HOM05D002928 ORTHO05D003794 1.3e-36 156.8 150 66.0
CsaV3_2G007560 Cucumis sativus L. HOM05D002928 ORTHO05D003794 1.3e-36 156.8 151 62.9
Hund04383 Selenicereus undatus HOM05D002928 ORTHO05D003794 1.6e-36 156.4 150 62.0
TAR625G0332 Trochodendron aralioides HOM05D002928 ORTHO05D003794 1.6e-36 156.4 145 64.8
Peaxi162Scf00062g00219 Petunia axillaris HOM05D002928 ORTHO05D003794 2.1e-36 156.0 150 66.7
Thecc.09G029000 Theobroma cacao HOM05D002928 ORTHO05D003794 2.1e-36 156.0 150 65.3
ClCG02G014440 Citrullus lanatus HOM05D002928 ORTHO05D003794 2.8e-36 155.6 151 62.3
Atru.chr7.18 Acer truncatum HOM05D002928 ORTHO05D003794 3.7e-36 155.2 150 64.7
Dinv41370 Davidia involucrata HOM05D002928 ORTHO05D003794 4.8e-36 154.8 153 62.7
Gohir.A07G027100 Gossypium hirsutum HOM05D002928 ORTHO05D003794 4.8e-36 154.8 150 63.3
COL.COLO4_18815 Corchorus olitorius HOM05D002928 ORTHO05D003794 6.3e-36 154.5 148 65.5
Gohir.D07G031100 Gossypium hirsutum HOM05D002928 ORTHO05D003794 6.3e-36 154.5 150 63.3
Gorai.001G032400 Gossypium raimondii HOM05D002928 ORTHO05D003794 6.3e-36 154.5 150 63.3
Hma1.2p1_0222F.1_g093640 Hydrangea macrophylla HOM05D002928 ORTHO05D003794 6.3e-36 154.5 152 61.8
Prupe.7G264100 Prunus persica HOM05D002928 ORTHO05D003794 6.3e-36 154.5 152 62.5
QL02p093370 Quercus lobata HOM05D002928 ORTHO05D003794 6.3e-36 154.5 150 64.0
Oeu052208.1 Olea europaea HOM05D002928 ORTHO05D003794 8.2e-36 154.1 149 63.8
PGSC0003DMG400007905 Solanum tuberosum HOM05D002928 ORTHO05D003794 1.1e-35 153.7 150 65.3
Duzib168G1829 Durio zibethinus HOM05D002928 ORTHO05D003794 1.4e-35 153.3 150 62.7
Manes.14G144400 Manihot esculenta HOM05D002928 ORTHO05D003794 1.4e-35 153.3 149 65.8
Solyc12g009990.2 Solanum lycopersicum HOM05D002928 ORTHO05D003794 1.4e-35 153.3 150 65.3
Sopen12g004860 Solanum pennellii HOM05D002928 ORTHO05D003794 1.4e-35 153.3 150 65.3
CSS0027124 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 1.8e-35 152.9 151 62.9
Sabra18G0090300 Salix brachista HOM05D002928 ORTHO05D003794 1.8e-35 152.9 153 64.1
Lsat_1_v5_gn_8_63581 Lactuca sativa HOM05D002928 ORTHO05D003794 2.4e-35 152.5 152 62.5
HanXRQChr06g0180611 Helianthus annuus HOM05D002928 ORTHO05D003794 3.1e-35 152.1 151 62.3
Potri.006G183600 Populus trichocarpa HOM05D002928 ORTHO05D003794 3.1e-35 152.1 150 62.7
Sed0017586 Sechium edule HOM05D002928 ORTHO05D003794 3.1e-35 152.1 152 61.2
CAN.G551.45 Capsicum annuum HOM05D002928 ORTHO05D003794 5.3e-35 151.4 150 64.7
Ciclev10007753m.g Citrus clementina HOM05D002928 ORTHO05D003794 5.3e-35 151.4 150 64.0
Sed0012591 Sechium edule HOM05D002928 ORTHO05D003794 6.9e-35 151.0 152 60.5
Peaxi162Scf01764g00002 Petunia axillaris HOM05D002928 ORTHO05D003794 9.0e-35 150.6 140 68.6
QL02p068861 Quercus lobata HOM05D002928 ORTHO05D003794 9.0e-35 150.6 150 64.0
HanXRQChr05g0143981 Helianthus annuus HOM05D002928 ORTHO05D003794 1.2e-34 150.2 151 60.9
MD15G1151700 Malus domestica HOM05D002928 ORTHO05D003794 1.2e-34 150.2 150 62.0
Sabra06G0139500 Salix brachista HOM05D002928 ORTHO05D003794 1.2e-34 150.2 149 63.1
THA.LOC104819994 Tarenaya hassleriana HOM05D002928 ORTHO05D003794 1.2e-34 150.2 153 61.4
Aqoxy3G02300 Aquilegia oxysepala HOM05D002928 ORTHO05D003794 2.0e-34 149.4 151 60.9
Cfa020818 Carpinus fangiana HOM05D002928 ORTHO05D003794 2.0e-34 149.4 151 62.9
Gohir.D06G098500 Gossypium hirsutum HOM05D002928 ORTHO05D003794 2.0e-34 149.4 152 63.2
Gorai.010G113600 Gossypium raimondii HOM05D002928 ORTHO05D003794 2.0e-34 149.4 152 63.2
MD02G1006600 Malus domestica HOM05D002928 ORTHO05D003794 2.0e-34 149.4 150 60.7
PGR102G2877 Punica granatum HOM05D002928 ORTHO05D003794 2.6e-34 149.1 149 59.7
Haze_19196 Corylus avellana HOM05D002928 ORTHO05D003794 3.4e-34 148.7 151 62.3
Gohir.A06G098000 Gossypium hirsutum HOM05D002928 ORTHO05D003794 3.4e-34 148.7 152 62.5
CSS0013967 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 4.5e-34 148.3 152 62.5
CAN.G160.55 Capsicum annuum HOM05D002928 ORTHO05D003794 4.5e-34 148.3 152 65.8
EL10Ac6g15341 Beta vulgaris HOM05D002928 ORTHO05D003794 1.3e-33 146.7 148 58.8
Cpa.g.sc46.162 Carica papaya HOM05D002928 ORTHO05D003794 1.3e-33 146.7 148 63.5
Lalb_Chr11g0072651 Lupinus albus HOM05D002928 ORTHO05D003794 1.3e-33 146.7 149 61.7
FvH4_2g11040 Fragaria vesca HOM05D002928 ORTHO05D003794 2.2e-33 146.0 155 58.1
Nitab4.5_0001571g0050 Nicotiana tabacum HOM05D002928 ORTHO05D003794 2.2e-33 146.0 144 63.9
Cc06_g14860 Coffea canephora HOM05D002928 ORTHO05D003794 5.0e-33 144.8 149 59.1
PSO384G2120 Papaver somniferum HOM05D002928 ORTHO05D003794 5.0e-33 144.8 152 59.9
Carub.0007s0997 Capsella rubella HOM05D002928 ORTHO05D003794 6.5e-33 144.4 153 62.7
CARHR238470 Cardamine hirsuta HOM05D002928 ORTHO05D003794 6.5e-33 144.4 153 62.7
COL.COLO4_22866 Corchorus olitorius HOM05D002928 ORTHO05D003794 6.5e-33 144.4 150 60.7
Eucgr.C02497 Eucalyptus grandis HOM05D002928 ORTHO05D003794 1.1e-32 143.7 153 60.1
Eucgr.C02536 Eucalyptus grandis HOM05D002928 ORTHO05D003794 1.1e-32 143.7 153 60.1
FAN24G1218 Fragaria x ananassa HOM05D002928 ORTHO05D003794 1.1e-32 143.7 153 58.8
Lalb_Chr13g0300841 Lupinus albus HOM05D002928 ORTHO05D003794 1.1e-32 143.7 152 60.5
Actinidia23555 Actinidia chinensis HOM05D002928 ORTHO05D002632 1.4e-32 143.3 143 63.6
ATR0115G002 Amborella trichopoda HOM05D002928 ORTHO05D003794 1.4e-32 143.3 152 61.2
AL7G21540 Arabidopsis lyrata HOM05D002928 ORTHO05D003794 1.4e-32 143.3 153 61.4
Rhsim03G0257400 Rhododendron simsii HOM05D002928 ORTHO05D003794 1.4e-32 143.3 176 53.4
Ah.03g147670 Amaranthus hybridus HOM05D002928 ORTHO05D003794 1.9e-32 142.9 151 57.0
AT4G30600 Arabidopsis thaliana HOM05D002928 ORTHO05D003794 1.9e-32 142.9 153 61.4
Nitab4.5_0005653g0030 Nicotiana tabacum HOM05D002928 ORTHO05D003794 2.5e-32 142.5 145 63.4
TWI34G1864 Tripterygium wilfordii HOM05D002928 ORTHO05D003794 2.5e-32 142.5 152 58.6
Aqoxy1G00970 Aquilegia oxysepala HOM05D002928 ORTHO05D003794 3.2e-32 142.1 149 59.7
BcaNung02974 Brassica carinata HOM05D002928 ORTHO05D003794 3.2e-32 142.1 154 61.7
CANSAT11G1221 Cannabis sativa HOM05D002928 ORTHO05D003794 3.2e-32 142.1 150 60.0
PSO591G0067 Papaver somniferum HOM05D002928 ORTHO05D003794 3.2e-32 142.1 152 59.9
PSO063G7436 Papaver somniferum HOM05D002928 ORTHO05D003794 5.5e-32 141.4 153 58.8
FvH4_1g00830 Fragaria vesca HOM05D002928 ORTHO05D003794 7.2e-32 141.0 153 57.5
FAN28G2936 Fragaria x ananassa HOM05D002928 ORTHO05D003794 7.2e-32 141.0 153 57.5
PSO339G1052 Papaver somniferum HOM05D002928 ORTHO05D003794 7.2e-32 141.0 153 58.8
Sp7g28470 Schrenkiella parvula HOM05D002928 ORTHO05D003794 7.2e-32 141.0 152 60.5
BcaNung00569 Brassica carinata HOM05D002928 ORTHO05D003794 9.3e-32 140.6 154 60.4
C07p58050 Brassica napus HOM05D002928 ORTHO05D003794 9.3e-32 140.6 154 60.4
BolC7t46263H Brassica oleracea HOM05D002928 ORTHO05D003794 9.3e-32 140.6 154 60.4
CiPaw.16G110200 Carya illinoinensis HOM05D002928 ORTHO05D003794 9.3e-32 140.6 140 61.4
Aa31LG2G19920 Aethionema arabicum HOM05D002928 ORTHO05D003794 1.2e-31 140.2 153 60.1
HPP92_005048 Vanilla planifolia HOM05D002928 ORTHO05D003794 1.6e-31 139.8 154 57.1
Glyma.06G220500 Glycine max HOM05D002928 ORTHO05D003794 2.1e-31 139.4 156 60.3
Lj1C1016G8 Lonicera japonica HOM05D002928 ORTHO05D003794 2.1e-31 139.4 167 56.3
Sc10g0008640 Simmondsia chinensis HOM05D002928 ORTHO05D003794 2.1e-31 139.4 151 58.9
Lj6g0013054 Lotus japonicus HOM05D002928 ORTHO05D003794 2.7e-31 139.0 153 58.8
ATR0772G178 Amborella trichopoda HOM05D002928 ORTHO05D003794 3.6e-31 138.7 152 59.9
Nn2g12407 Nelumbo nucifera HOM05D002928 ORTHO05D003794 4.6e-31 138.3 150 57.3
FAN26G1266 Fragaria x ananassa HOM05D002928 ORTHO05D003794 6.1e-31 137.9 155 57.4
TWI32G1175 Tripterygium wilfordii HOM05D002928 ORTHO05D003794 6.1e-31 137.9 152 57.2
A03p60120 Brassica napus HOM05D002928 ORTHO05D003794 1.0e-30 137.1 156 59.0
BraA03t15057Z Brassica rapa HOM05D002928 ORTHO05D003794 1.0e-30 137.1 156 59.0
CiPaw.16G109700 Carya illinoinensis HOM05D002928 ORTHO05D034233 1.0e-30 137.1 150 60.0
VMungo1309G0506 Vigna mungo HOM05D002928 ORTHO05D003794 1.3e-30 136.7 152 58.6
BcaNung04564 Brassica carinata HOM05D002928 ORTHO05D003794 1.8e-30 136.3 157 59.2
Thhalv10024667m.g Eutrema salsugineum HOM05D002928 ORTHO05D003794 1.8e-30 136.3 152 59.2
FAN23G2032 Fragaria x ananassa HOM05D002928 ORTHO05D003794 2.3e-30 136.0 149 57.0
unitig_60.g25522 Utricularia gibba HOM05D002928 ORTHO05D003794 3.0e-30 135.6 146 58.2
SGA_v2.0_scaffold45G17027 Striga asiatica HOM05D002928 ORTHO05D003794 3.9e-30 135.2 149 59.1
HPP92_005065 Vanilla planifolia HOM05D002928 ORTHO05D003794 5.1e-30 134.8 154 55.8
Glyma.17G073300 Glycine max HOM05D002928 ORTHO05D003794 6.7e-30 134.4 148 58.1
RcHm_v2.0_Chr2g0085561 Rosa chinensis HOM05D002928 ORTHO05D003794 1.1e-29 133.7 153 56.9
SEGI_12988 Sequoiadendron giganteum HOM05D002928 ORTHO05D003794 2.5e-29 132.5 155 56.8
unitig_0.g516 Utricularia gibba HOM05D002928 ORTHO05D003794 2.5e-29 132.5 150 56.7
BcaC09g51851 Brassica carinata HOM05D002928 ORTHO05D003794 5.7e-29 131.3 156 57.7
CDE06G1463 Ceratophyllum demersum HOM05D002928 ORTHO05D003794 5.7e-29 131.3 155 54.8
VMungo1215G3047 Vigna mungo HOM05D002928 ORTHO05D003794 5.7e-29 131.3 151 57.0
A01p07640 Brassica napus HOM05D002928 ORTHO05D003794 7.4e-29 131.0 157 57.3
BraA01t00707Z Brassica rapa HOM05D002928 ORTHO05D003794 7.4e-29 131.0 157 57.3
Phvul.009G194700 Phaseolus vulgaris HOM05D002928 ORTHO05D003794 9.7e-29 130.6 153 56.2
Medtr4g130770 Medicago truncatula HOM05D002928 ORTHO05D003794 2.2e-28 129.4 154 56.5
AUR62003540 Chenopodium quinoa HOM05D002928 ORTHO05D003794 2.8e-28 129.0 152 55.9
Psat0s2403g0040 Pisum sativum HOM05D002928 ORTHO05D003794 4.8e-28 128.3 154 53.9
CDE03G0364 Ceratophyllum demersum HOM05D002928 ORTHO05D003794 6.3e-28 127.9 155 54.2
AUR62017854 Chenopodium quinoa HOM05D002928 ORTHO05D003794 8.2e-28 127.5 152 55.3
Ca_21132_v3 Cicer arietinum L. HOM05D002928 ORTHO05D003794 1.8e-27 126.3 154 56.5
C01p08330 Brassica napus HOM05D002928 ORTHO05D003794 2.4e-27 125.9 156 55.8
BolC1t00819H Brassica oleracea HOM05D002928 ORTHO05D003794 2.4e-27 125.9 156 55.8
Lj4g0021489 Lotus japonicus HOM05D002928 ORTHO05D003794 2.4e-27 125.9 152 54.6
SGA_v2.0_scaffold23G10013 Striga asiatica HOM05D002928 ORTHO05D003794 6.9e-27 124.4 147 55.1
Phvul.003G155500 Phaseolus vulgaris HOM05D002928 ORTHO05D003794 1.2e-26 123.6 152 55.3
arahy.Tifrunner.gnm1.ann1.V0HTQD Arachis hypogaea HOM05D002928 ORTHO05D003794 2.0e-26 122.9 147 55.1
arahy.Tifrunner.gnm1.ann1.AAXI8T Arachis hypogaea HOM05D002928 ORTHO05D003794 2.6e-26 122.5 147 55.8
CiPaw.16G108700 Carya illinoinensis HOM05D002928 ORTHO05D003794 2.6e-26 122.5 150 57.3
SGA_v2.0_scaffold426G51505 Striga asiatica HOM05D002928 ORTHO05D003794 2.9e-25 119.0 148 54.7
Hma1.2p1_1036F.1_g250545 Hydrangea macrophylla HOM05D002928 ORTHO05D003794 1.9e-24 116.3 120 59.2
Zm00001eb000480 Zea mays HOM05D002928 ORTHO05D003794 2.1e-23 112.8 140 51.4
Mapoly0062s0007 Marchantia polymorpha HOM05D002928 ORTHO05D003794 2.8e-20 102.4 152 50.0
Os08g0480100 Oryza sativa ssp. japonica HOM05D002928 ORTHO05D003794 2.8e-20 102.4 144 48.6
CiPaw.16G110000 Carya illinoinensis HOM05D002928 ORTHO05D003794 1.8e-19 99.8 115 58.3
MBI16_g24666_MAGBIO Magnolia biondii HOM05D002928 ORTHO05D003794 5.3e-19 98.2 108 58.3
Pp3c19_22330 Physcomitrium patens HOM05D002928 ORTHO05D003794 5.3e-19 98.2 150 47.3
GSVIVG01023620001 Vitis vinifera HOM05D002928 ORTHO05D003794 1.5e-18 96.7 61 86.9
Rhsim01G0028400 Rhododendron simsii HOM05D002928 ORTHO05D011390 5.9e-18 94.7 136 52.9
TPR.G30712 Trifolium pratense HOM05D002928 ORTHO05D003794 7.7e-18 94.4 61 85.2
PSO210G4055 Papaver somniferum HOM05D002928 ORTHO05D003794 1.0e-17 94.0 120 50.8
AagrBONN_evm.TU.Sc2ySwM_344.2608 Anthoceros agrestis HOM05D002928 ORTHO05D003794 2.2e-17 92.8 148 43.9
PSO210G6788 Papaver somniferum HOM05D002928 ORTHO05D003794 5.0e-17 91.7 120 50.0
Nn8g39922 Nelumbo nucifera HOM05D002928 ORTHO05D003794 5.5e-16 88.2 71 73.2
CBR_g18888 Chara braunii HOM05D002928 ORTHO05D003794 6.1e-15 84.7 61 73.8
Lsat_1_v5_gn_4_90780 Lactuca sativa HOM05D002928 ORTHO05D003794 6.7e-14 81.3 131 42.0
TPR.G24848 Trifolium pratense HOM05D002928 ORTHO05D003794 4.1e-11 72.0 119 45.4
FAN20G1404 Fragaria x ananassa HOM05D002928 ORTHO05D003794 9.1e-11 70.9 54 75.9
MD02G1061600 Malus domestica HOM05D002928 ORTHO05D248122 9.1e-11 70.9 63 66.7
RcHm_v2.0_Chr7g0224891 Rosa chinensis HOM05D002928 ORTHO05D003794 2.6e-10 69.3 79 54.4
Pp3c22_18840 Physcomitrium patens HOM05D002928 ORTHO05D003794 5.9e-10 68.2 133 42.9
Glyma.02G204650 Glycine max HOM05D002928 ORTHO05D034233 3.2e-08 62.4 36 88.9
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 5.5e-08 61.6 50 70.0
MCO13G152 Micromonas commoda HOM05D002928 ORTHO05D003794 2.7e-07 59.3 61 52.5
Lsat_1_v5_gn_9_62381 Lactuca sativa HOM05D002928 ORTHO05D003794 1.8e-06 56.6 61 63.9
vmacro15262 Vaccinium macrocarpon HOM05D002928 ORTHO05D426645 2.3e-06 56.2 67 61.2
Lsat_1_v5_gn_1_30341 Lactuca sativa HOM05D002928 ORTHO05D003794 4.0e-06 55.5 95 47.4
SMO367G0463 Selaginella moellendorffii HOM05D002928 ORTHO05D003794 5.2e-06 55.1 143 33.6


User provided reference genes

Program Settings