Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 6.8e-47 190.3 93 100.0
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.9e-33 145.6 93 74.2
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.9e-33 145.6 93 74.2
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 1.4e-31 139.4 93 71.0
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 1.8e-31 139.0 87 73.6
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 2.3e-31 138.7 88 77.3
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 4.0e-31 137.9 88 75.0
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 6.8e-31 137.1 88 71.6
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 6.8e-31 137.1 88 72.7
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 2.6e-30 135.2 88 70.5
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 2.6e-30 135.2 88 71.6
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 3.4e-30 134.8 88 69.3
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 3.4e-30 134.8 87 71.3
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 4.4e-30 134.4 88 71.6
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 4.4e-30 134.4 87 71.3
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 4.4e-30 134.4 87 71.3
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 7.5e-30 133.7 88 73.9
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 7.5e-30 133.7 88 71.6
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 7.5e-30 133.7 88 70.5
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 9.8e-30 133.3 88 71.6
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 9.8e-30 133.3 88 70.5
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 1.3e-29 132.9 88 73.9
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.3e-29 132.9 87 72.4
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.7e-29 132.5 88 71.6
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.2e-29 132.1 91 71.4
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.2e-29 132.1 91 71.4
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 2.2e-29 132.1 91 71.4
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 2.9e-29 131.7 88 70.5
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 3.7e-29 131.3 87 71.3
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 4.9e-29 131.0 87 70.1
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 8.3e-29 130.2 88 71.6
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 8.3e-29 130.2 87 69.0
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 8.3e-29 130.2 88 71.6
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.4e-28 129.4 91 68.1
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 1.4e-28 129.4 88 68.2
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.4e-28 129.4 88 68.2
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.4e-28 129.4 88 68.2
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 1.4e-28 129.4 88 69.3
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 1.9e-28 129.0 88 69.3
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.9e-28 129.0 88 68.2
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 1.9e-28 129.0 88 69.3
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 2.4e-28 128.6 88 70.5
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 2.4e-28 128.6 85 69.4
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 2.4e-28 128.6 88 67.0
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 3.2e-28 128.3 88 70.5
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 3.2e-28 128.3 88 71.6
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 4.1e-28 127.9 88 68.2
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 4.1e-28 127.9 91 68.1
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 4.1e-28 127.9 88 70.5
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 5.4e-28 127.5 88 65.9
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 5.4e-28 127.5 91 65.9
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 7.1e-28 127.1 92 73.9
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 7.1e-28 127.1 92 73.9
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 7.1e-28 127.1 88 65.9
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 7.1e-28 127.1 88 71.6
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 9.2e-28 126.7 88 65.9
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 9.2e-28 126.7 88 67.0
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 9.2e-28 126.7 93 68.8
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 9.2e-28 126.7 88 65.9
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 9.2e-28 126.7 88 68.2
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 1.2e-27 126.3 88 68.2
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.1e-27 125.6 91 68.1
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 2.1e-27 125.6 88 63.6
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 2.1e-27 125.6 88 63.6
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 2.1e-27 125.6 88 63.6
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 2.1e-27 125.6 88 63.6
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 2.1e-27 125.6 88 63.6
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 2.1e-27 125.6 88 70.5
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 2.7e-27 125.2 88 64.8
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 3.5e-27 124.8 88 65.9
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 3.5e-27 124.8 91 67.0
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 3.5e-27 124.8 88 68.2
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 3.5e-27 124.8 88 67.0
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 4.6e-27 124.4 91 63.7
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 1.0e-26 123.2 91 65.9
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 1.0e-26 123.2 88 65.9
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 1.0e-26 123.2 91 65.9
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 1.3e-26 122.9 89 68.5
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 1.7e-26 122.5 88 67.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 2.3e-26 122.1 88 69.3
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 3.9e-26 121.3 88 62.5
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 3.9e-26 121.3 95 64.2
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 3.9e-26 121.3 88 64.8
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 3.9e-26 121.3 88 64.8
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 6.6e-26 120.6 88 63.6
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 1.9e-25 119.0 81 69.1
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 7.3e-25 117.1 87 65.5
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 9.5e-25 116.7 76 72.4
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 1.6e-24 115.9 84 65.5
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 2.9e-21 105.1 93 57.0
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 4.1e-20 101.3 81 56.8
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 9.2e-20 100.1 77 58.4
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 2.5e-17 92.0 88 51.1
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 2.5e-17 92.0 88 51.1
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 2.5e-17 92.0 89 44.9
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 4.7e-16 87.8 68 61.8
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 3.1e-15 85.1 67 59.7
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 4.0e-15 84.7 79 53.2
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 4.0e-15 84.7 66 62.1
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.1e-09 66.6 44 68.2
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 5.6e-09 64.3 49 61.2


User provided reference genes

Program Settings