Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 6.6e-85 317.4 168 100.0
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 2.1e-83 312.4 168 98.2
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 8.4e-64 247.3 159 81.1
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.9e-63 246.1 160 81.2
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 3.2e-63 245.4 161 81.4
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 1.2e-62 243.4 155 83.9
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 3.5e-62 241.9 159 80.5
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 1.8e-61 239.6 156 81.4
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 3.9e-61 238.4 159 79.2
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 1.1e-60 236.9 159 78.0
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 5.7e-60 234.6 159 78.6
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 5.7e-60 234.6 159 79.2
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 9.7e-60 233.8 158 74.7
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 1.3e-59 233.4 159 77.4
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 1.6e-59 233.0 159 77.4
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 2.8e-59 232.3 159 76.7
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 2.8e-59 232.3 159 76.7
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 2.8e-59 232.3 159 76.7
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.1e-58 230.3 159 76.7
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 1.4e-58 229.9 159 75.5
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 3.1e-58 228.8 156 76.3
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 5.3e-58 228.0 168 71.4
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 5.3e-58 228.0 156 75.6
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 5.3e-58 228.0 156 78.8
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 6.9e-58 227.6 154 79.2
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 6.9e-58 227.6 164 74.4
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 6.9e-58 227.6 156 75.6
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 9.0e-58 227.3 161 73.9
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 1.2e-57 226.9 156 77.6
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 1.5e-57 226.5 159 75.5
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.5e-57 226.5 156 75.0
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 2.0e-57 226.1 158 76.6
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 2.0e-57 226.1 159 73.6
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 2.6e-57 225.7 157 75.8
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 4.5e-57 224.9 159 72.3
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 5.9e-57 224.6 159 73.6
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 7.7e-57 224.2 159 76.1
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 7.7e-57 224.2 169 72.2
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.0e-56 223.8 159 73.0
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 1.7e-56 223.0 159 73.6
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 2.2e-56 222.6 160 73.8
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 2.2e-56 222.6 156 75.0
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 1.1e-55 220.3 159 70.4
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 1.9e-55 219.5 156 74.4
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.9e-55 219.5 160 71.9
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 4.2e-55 218.4 161 70.2
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 4.2e-55 218.4 161 72.0
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 4.2e-55 218.4 159 73.0
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 5.5e-55 218.0 159 71.7
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 2.1e-54 216.1 159 70.4
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 6.1e-54 214.5 162 68.5
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 7.9e-54 214.2 156 69.9
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.4e-53 213.4 159 70.4
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 1.4e-53 213.4 160 73.1
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 1.8e-53 213.0 153 72.5
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.3e-53 212.6 155 71.0
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 6.7e-53 211.1 158 67.7
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 6.7e-53 211.1 156 70.5
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 8.8e-53 210.7 159 67.3
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 1.5e-52 209.9 155 68.4
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 2.5e-52 209.1 137 81.8
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 2.5e-52 209.1 161 68.3
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 2.5e-52 209.1 159 67.3
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 7.4e-52 207.6 159 67.9
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 9.7e-52 207.2 188 62.2
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.7e-51 206.5 161 67.7
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.7e-51 206.5 161 66.5
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 8.2e-51 204.1 159 67.3
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 1.1e-50 203.8 154 68.8
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.1e-50 202.2 178 62.9
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 3.1e-50 202.2 152 67.8
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 4.1e-50 201.8 159 64.8
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 6.9e-50 201.1 161 64.6
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 1.2e-49 200.3 149 67.8
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 3.4e-49 198.7 161 64.0
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.3e-48 196.8 152 66.4
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 3.8e-48 195.3 155 65.8
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 8.5e-48 194.1 162 64.2
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 1.1e-47 193.7 170 62.4
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 1.4e-47 193.4 112 88.4
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 1.9e-47 193.0 163 62.6
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 3.2e-47 192.2 159 67.9
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 2.1e-46 189.5 159 62.9
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 3.6e-46 188.7 156 61.5
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 1.0e-45 187.2 146 67.8
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 5.1e-45 184.9 156 61.5
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 5.1e-45 184.9 156 61.5
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 6.7e-45 184.5 113 82.3
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 6.7e-45 184.5 127 79.5
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 2.8e-43 179.1 115 77.4
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 8.2e-43 177.6 118 74.6
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 1.1e-42 177.2 123 79.7
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 1.8e-42 176.4 117 75.2
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 4.1e-42 175.3 114 76.3
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 4.1e-42 175.3 117 75.2
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 2.0e-41 172.9 161 61.5
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.7e-40 169.9 101 80.2
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 3.6e-38 162.2 124 71.8
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.0e-37 160.6 147 57.1
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 3.0e-37 159.1 124 70.2
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 2.0e-36 156.4 121 72.7
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 5.7e-36 154.8 177 54.2
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.4e-34 150.2 123 68.3
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 3.1e-34 149.1 159 53.5
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 3.5e-33 145.6 152 52.0
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 7.7e-33 144.4 126 61.9
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.7e-30 135.2 152 51.3
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 4.7e-30 135.2 125 57.6
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 1.8e-26 123.2 146 47.3
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.0e-24 117.5 143 49.0
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 2.7e-22 109.4 70 74.3
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.8e-21 106.7 99 57.6
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 1.0e-16 90.9 98 46.9
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 3.7e-11 72.4 112 38.4
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 3.0e-08 62.8 37 73.0


User provided reference genes

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