Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 0.0e+00 2607.8 1307 100.0
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 0.0e+00 1858.2 1395 69.6
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 1763.4 1393 66.8
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 1730.7 1389 65.9
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 0.0e+00 1708.7 1353 66.2
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 1695.2 1393 65.0
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1681.4 1390 64.2
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1672.5 1390 63.8
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 0.0e+00 1664.0 1404 63.6
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 0.0e+00 1654.4 1390 63.1
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 0.0e+00 1651.3 1370 63.9
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 0.0e+00 1644.0 1381 63.5
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 0.0e+00 1637.5 1379 63.7
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1632.1 1375 62.8
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 0.0e+00 1631.7 1384 62.0
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 0.0e+00 1622.1 1383 62.4
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 0.0e+00 1614.7 1392 62.1
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 0.0e+00 1607.4 1386 62.2
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 0.0e+00 1605.5 1396 62.1
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 0.0e+00 1603.2 1391 62.2
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 1593.2 1371 61.3
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 0.0e+00 1587.0 1397 60.9
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 1579.7 1382 60.9
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 0.0e+00 1579.3 1388 61.2
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 0.0e+00 1564.3 1384 60.7
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 0.0e+00 1563.9 1403 59.4
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 1562.7 1382 61.3
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 0.0e+00 1558.9 1373 61.0
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 0.0e+00 1556.2 1401 60.1
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 0.0e+00 1555.0 1381 61.3
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 0.0e+00 1554.7 1395 60.2
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 0.0e+00 1553.5 1340 61.6
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 0.0e+00 1548.5 1384 60.3
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 0.0e+00 1545.8 1329 61.4
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 0.0e+00 1527.7 1373 59.7
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 0.0e+00 1525.0 1363 60.3
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 0.0e+00 1524.2 1373 59.8
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 0.0e+00 1523.5 1383 59.9
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 1517.3 1370 59.4
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 0.0e+00 1511.5 1369 59.3
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 0.0e+00 1506.5 1391 58.5
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 0.0e+00 1505.7 1380 58.4
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 0.0e+00 1505.7 1391 58.7
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 1492.6 1397 57.9
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 0.0e+00 1486.1 1378 57.9
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 1477.6 1375 57.3
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 1476.5 1382 57.8
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 0.0e+00 1472.2 1234 63.5
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 0.0e+00 1471.8 1374 57.9
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 0.0e+00 1468.4 1384 58.0
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 1467.6 1315 60.6
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 1467.2 1374 56.8
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 0.0e+00 1466.4 1369 58.6
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 0.0e+00 1462.6 1374 58.0
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 0.0e+00 1461.4 1377 57.2
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 0.0e+00 1458.4 1367 57.6
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 0.0e+00 1453.7 1374 57.9
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 0.0e+00 1453.3 1381 57.1
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1450.6 1564 52.8
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 0.0e+00 1449.1 1369 57.7
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 0.0e+00 1448.7 1382 57.2
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 0.0e+00 1448.0 1378 56.7
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 0.0e+00 1446.4 1360 57.4
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 0.0e+00 1446.0 1389 56.4
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 0.0e+00 1442.2 1368 58.0
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 0.0e+00 1439.1 1378 57.6
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 1436.8 1362 57.3
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 0.0e+00 1434.5 1408 57.0
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 0.0e+00 1429.1 1372 56.1
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 0.0e+00 1418.3 1343 56.9
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 0.0e+00 1414.1 1389 55.9
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 1389.4 1369 57.4
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 1387.5 1369 57.3
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 0.0e+00 1366.7 1386 54.8
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 0.0e+00 1365.9 1350 56.8
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 1360.5 1359 55.9
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 0.0e+00 1356.3 1357 56.7
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 0.0e+00 1354.7 1349 56.3
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 0.0e+00 1350.5 1355 55.5
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 0.0e+00 1348.2 1351 55.7
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 1345.1 1342 55.7
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 0.0e+00 1345.1 1342 55.7
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 1342.8 1344 55.7
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 0.0e+00 1342.8 1344 55.7
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 0.0e+00 1341.6 1345 55.5
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 0.0e+00 1256.5 1342 53.5
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 0.0e+00 1244.2 1421 49.3
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 0.0e+00 1235.7 1384 50.9
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 0.0e+00 1206.8 1351 50.9
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 0.0e+00 1201.8 1211 56.3
vmacro05484 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1198.0 1000 63.2
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 0.0e+00 1187.2 1409 48.9
CsaV3_3G041530 Cucumis sativus L. HOM05D005746 ORTHO05D007105 0.0e+00 1175.2 1182 56.3
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 0.0e+00 1157.5 1214 52.1
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 4.9e-300 1035.0 1465 42.0
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 6.6e-289 998.0 1353 45.8
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 8.7e-265 917.9 1434 40.3
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 4.3e-248 862.4 1379 38.9
BcaNung05131 Brassica carinata HOM05D005746 ORTHO05D007105 2.2e-228 797.0 819 52.7
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 1.3e-220 771.2 1321 37.6
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis HOM05D005746 ORTHO05D007105 4.4e-208 729.6 1323 36.9
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 1.3e-196 691.4 597 64.3
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 9.1e-190 668.7 1504 32.1
BcaC06g33650 Brassica carinata HOM05D005746 ORTHO05D007105 2.3e-169 600.9 943 41.7
Cpa.g.sc14.9 Carica papaya HOM05D005746 ORTHO05D007105 1.7e-151 541.6 439 61.5
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 3.8e-111 407.5 385 59.0
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 6.7e-92 343.6 1507 25.0
Migut.L00530 Erythranthe guttata HOM05D005746 ORTHO05D007105 7.5e-75 287.0 739 31.4
CARHR159400 Cardamine hirsuta HOM05D005746 ORTHO05D007105 9.5e-62 243.4 285 52.6
CsaV3_UNG114880 Cucumis sativus L. HOM05D005746 ORTHO05D007105 1.7e-55 222.6 178 69.1
vmacro05485 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 9.2e-49 200.3 234 48.7
CsaV3_3G041540 Cucumis sativus L. HOM05D005746 ORTHO05D007105 7.8e-48 197.2 190 57.4
Lj2g0022018 Lotus japonicus HOM05D005746 ORTHO05D007105 1.6e-40 172.9 138 65.9
Duzib147G0404 Durio zibethinus HOM05D005746 ORTHO05D007105 1.4e-36 159.8 111 73.0
Cre15.g642050 Chlamydomonas reinhardtii HOM05D005746 ORTHO05D007105 1.3e-29 136.7 252 35.3
VMungo1127G1036 Vigna mungo HOM05D005746 ORTHO05D007105 6.4e-26 124.4 94 71.3
VMungo1127G1975 Vigna mungo HOM05D005746 ORTHO05D007105 3.0e-23 115.5 99 62.6
Gohir.A11G290200 Gossypium hirsutum HOM05D005746 ORTHO05D007105 7.1e-09 67.8 71 52.1
Cfa022176 Carpinus fangiana HOM05D005746 ORTHO05D125765 3.0e-07 62.4 386 22.5


User provided reference genes

Program Settings