Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju41A41T31 Lonicera japonica HOM05D008944 ORTHO05D012260 1.0e-219 766.5 416 100.0
Dinv35105 Davidia involucrata HOM05D008944 ORTHO05D012715 3.4e-74 283.1 420 47.9
CSS0002578 Camellia sinensis var. sinensis HOM05D008944 ORTHO05D012715 4.4e-69 266.2 428 43.5
Dinv33443 Davidia involucrata HOM05D008944 ORTHO05D012715 2.9e-65 253.4 420 45.2
GSVIVG01032411001 Vitis vinifera HOM05D000662 ORTHO05D012715 7.0e-43 179.1 426 36.6
TAR622G0869 Trochodendron aralioides HOM05D008944 ORTHO05D012260 4.5e-42 176.4 496 34.5
TAR374G0422 Trochodendron aralioides HOM05D003163 ORTHO05D003504 9.2e-35 152.1 485 32.6
CiPaw.03G043400 Carya illinoinensis HOM05D018456 ORTHO05D024862 4.5e-34 149.8 413 34.6
Actinidia36113 Actinidia chinensis HOM05D008944 ORTHO05D017205 2.9e-33 147.1 402 37.1
Cfa007371 Carpinus fangiana HOM05D018456 ORTHO05D024862 8.6e-33 145.6 431 35.3
Haze_14737 Corylus avellana HOM05D018456 ORTHO05D024862 1.1e-32 145.2 419 35.3
QL02p074766 Quercus lobata HOM05D018456 ORTHO05D024862 1.1e-32 145.2 392 35.7
Rhsim08G0050800 Rhododendron simsii HOM05D008944 ORTHO05D012715 3.3e-32 143.7 301 41.5
Hma1.2p1_0999F.1_g246230 Hydrangea macrophylla HOM05D008944 ORTHO05D012260 9.5e-32 142.1 279 41.9
Atru.chr6.2390 Acer truncatum HOM05D008944 ORTHO05D012260 6.6e-25 119.4 229 44.5
Duzib264G0142 Durio zibethinus HOM05D010821 ORTHO05D012260 2.8e-23 114.0 244 40.6
Lsat_1_v5_gn_4_183881 Lactuca sativa HOM05D018074 ORTHO05D020589 5.2e-22 109.8 405 30.1
Oeu054621.3 Olea europaea HOM05D039831 ORTHO05D036970 2.0e-21 107.8 256 36.7
MSTRG.24036 Avicennia marina HOM05D025081 ORTHO05D019527 1.1e-19 102.1 383 32.4
Thecc.04G017000 Theobroma cacao HOM05D010821 ORTHO05D012260 4.1e-19 100.1 431 33.2
Ciclev10014006m.g Citrus clementina HOM05D018456 ORTHO05D012260 1.6e-18 98.2 408 32.1
Manes.17G112400 Manihot esculenta HOM05D013434 ORTHO05D014659 3.5e-18 97.1 356 32.6
Sabra16G0224300 Salix brachista HOM05D013434 ORTHO05D014659 6.0e-18 96.3 399 32.8
ECA232G4849 Erigeron canadensis HOM05D018074 ORTHO05D020589 1.0e-17 95.5 390 32.3
TWI36G0429 Tripterygium wilfordii HOM05D013434 ORTHO05D014659 1.0e-17 95.5 308 34.7
Gohir.A07G223100 Gossypium hirsutum HOM05D010821 ORTHO05D029264 2.8e-15 87.4 420 28.3
Potri.001G345300 Populus trichocarpa HOM05D013434 ORTHO05D014659 3.6e-15 87.0 431 31.3
Nitab4.5_0007124g0010 Nicotiana tabacum HOM05D012441 ORTHO05D013726 4.7e-15 86.7 305 34.1
Cpa.g.sc108.66 Carica papaya HOM05D008944 ORTHO05D012260 6.2e-15 86.3 82 65.9
Duzib187G0380 Durio zibethinus HOM05D010821 ORTHO05D012260 6.2e-15 86.3 411 29.0
COL.COLO4_29109 Corchorus olitorius HOM05D010821 ORTHO05D012260 1.1e-14 85.5 375 29.6
Cc07_g01740 Coffea canephora HOM05D008944 ORTHO05D012260 3.1e-14 84.0 353 32.3
Nitab4.5_0002468g0060 Nicotiana tabacum HOM05D012441 ORTHO05D013726 3.1e-14 84.0 430 29.1
PSO782G2207 Papaver somniferum HOM05D034920 ORTHO05D037276 4.0e-14 83.6 455 27.7
Gohir.D07G229800 Gossypium hirsutum HOM05D010821 ORTHO05D029264 5.2e-14 83.2 420 28.6
Migut.H00079 Erythranthe guttata HOM05D025081 ORTHO05D019527 1.5e-13 81.6 536 27.4
Gorai.001G264900 Gossypium raimondii HOM05D010821 ORTHO05D029264 1.5e-13 81.6 420 28.6
THA.LOC104805961 Tarenaya hassleriana HOM05D011342 ORTHO05D013726 2.0e-13 81.3 409 28.9
vmacro18280 Vaccinium macrocarpon HOM05D008944 ORTHO05D012715 2.6e-13 80.9 271 32.1
RcHm_v2.0_Chr2g0172861 Rosa chinensis HOM05D011862 ORTHO05D014222 3.4e-13 80.5 435 31.3
Gohir.D04G057300 Gossypium hirsutum HOM05D010821 ORTHO05D012260 5.8e-13 79.7 434 29.5
Sopen02g031170 Solanum pennellii HOM05D012441 ORTHO05D013726 5.8e-13 79.7 248 34.7
PGSC0003DMG400012631 Solanum tuberosum HOM05D012441 ORTHO05D013726 5.8e-13 79.7 262 34.4
BraA07t29728Z Brassica rapa HOM05D011342 ORTHO05D013682 9.9e-13 79.0 354 29.4
Gorai.012G064000 Gossypium raimondii HOM05D010821 ORTHO05D012260 1.7e-12 78.2 405 29.9
Duzib147G0652 Durio zibethinus HOM05D010821 ORTHO05D029264 1.4e-11 75.1 432 31.7
CAN.G473.9 Capsicum annuum HOM05D012441 ORTHO05D013726 1.9e-11 74.7 269 31.6
Gohir.A05G355900 Gossypium hirsutum HOM05D010821 ORTHO05D012260 4.1e-11 73.6 442 28.7
A07p20270 Brassica napus HOM05D011342 ORTHO05D013682 5.4e-11 73.2 258 30.2
HanXRQChr09g0255141 Helianthus annuus HOM05D018074 ORTHO05D020589 5.4e-11 73.2 370 27.8
BcaB02g07948 Brassica carinata HOM05D011342 ORTHO05D013682 1.2e-10 72.0 103 52.4
BcaC08g44455 Brassica carinata HOM05D011342 ORTHO05D013682 1.6e-10 71.6 350 28.6
BolC6t37106H Brassica oleracea HOM05D011342 ORTHO05D013682 1.6e-10 71.6 350 28.6
MBI10_g00741_MAGBIO Magnolia biondii HOM05D012441 ORTHO05D013726 1.6e-10 71.6 410 30.5
FAN14G4966 Fragaria x ananassa HOM05D011862 ORTHO05D014222 3.5e-10 70.5 378 30.7
CANSAT64G1129 Cannabis sativa HOM05D018456 ORTHO05D013726 4.6e-10 70.1 401 27.2
PGR142G1054 Punica granatum HOM05D012441 ORTHO05D013726 4.6e-10 70.1 419 30.3
SalBow1G7921 Salvia bowleyana HOM05D025081 ORTHO05D019527 4.6e-10 70.1 61 68.9
Sc03g0007480 Simmondsia chinensis HOM05D008944 ORTHO05D019527 1.0e-09 68.9 354 27.1
FAN09G0781 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.7e-09 68.2 423 29.1
Prupe.3G291300 Prunus persica HOM05D011862 ORTHO05D014222 2.3e-09 67.8 65 63.1
MD17G1027400 Malus domestica HOM05D011862 ORTHO05D014222 3.9e-09 67.0 85 55.3
Aqoxy5G03794 Aquilegia oxysepala HOM05D012441 ORTHO05D013726 1.1e-08 65.5 422 30.3
C06p19060 Brassica napus HOM05D011342 ORTHO05D013682 1.1e-08 65.5 421 26.1
FvH4_6g51240 Fragaria vesca HOM05D011862 ORTHO05D014222 1.5e-08 65.1 424 27.8
Aa31LG9G1170 Aethionema arabicum HOM05D011342 ORTHO05D013682 5.6e-08 63.2 432 27.5
CARHR261570 Cardamine hirsuta HOM05D011342 ORTHO05D013682 7.3e-08 62.8 281 32.0
vmacro05865 Vaccinium macrocarpon HOM05D008944 ORTHO05D017205 3.6e-07 60.5 253 29.2
Sp7g01470 Schrenkiella parvula HOM05D011342 ORTHO05D013682 8.1e-07 59.3 158 39.9
Lj1g0010976 Lotus japonicus HOM05D013652 ORTHO05D016227 5.2e-06 56.6 148 37.2
Carub.0007s3514 Capsella rubella HOM05D011342 ORTHO05D013682 8.9e-06 55.8 413 24.9


User provided reference genes

Program Settings