Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 2.1e-167 592.4 328 100.0
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 1.2e-98 364.0 324 61.7
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 7.3e-96 354.8 324 65.4
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 1.8e-94 350.1 340 60.9
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 2.4e-94 349.7 320 61.6
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 1.3e-92 344.0 320 64.4
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 1.3e-92 344.0 318 63.5
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 3.8e-92 342.4 326 64.4
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 9.3e-91 337.8 339 56.9
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 4.6e-90 335.5 332 60.2
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 6.0e-90 335.1 327 62.4
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 1.0e-89 334.3 323 58.5
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.7e-89 333.6 332 59.9
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 1.7e-89 333.6 324 57.7
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 1.7e-89 333.6 324 58.3
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 3.0e-89 332.8 330 58.5
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 3.0e-89 332.8 317 59.3
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.1e-88 330.9 323 60.1
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 1.5e-88 330.5 323 61.6
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 2.5e-88 329.7 323 61.3
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 2.5e-88 329.7 323 61.3
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 2.5e-88 329.7 336 58.9
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 7.4e-88 328.2 332 59.0
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 2.8e-87 326.2 323 54.8
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 3.6e-87 325.9 328 59.5
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 1.4e-86 323.9 339 61.4
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 2.4e-86 323.2 344 56.7
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 4.0e-86 322.4 324 61.4
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 1.5e-85 320.5 329 58.7
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 2.6e-85 319.7 363 55.4
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 9.9e-85 317.8 342 54.1
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 1.7e-84 317.0 323 59.8
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 2.2e-84 316.6 332 60.8
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 3.8e-84 315.8 320 61.6
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 4.2e-83 312.4 323 59.1
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 2.7e-82 309.7 323 53.9
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 3.5e-82 309.3 328 56.1
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 4.6e-82 308.9 323 59.4
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 1.3e-81 307.4 332 58.4
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 2.3e-81 306.6 318 58.8
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 6.7e-81 305.1 318 52.2
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 2.5e-80 303.1 321 57.0
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 3.3e-80 302.8 322 54.3
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 3.3e-80 302.8 322 54.3
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 4.3e-80 302.4 317 57.7
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 4.3e-80 302.4 335 57.3
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 5.6e-80 302.0 322 59.6
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 7.4e-80 301.6 331 53.2
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 7.4e-80 301.6 322 58.4
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 2.1e-79 300.1 319 54.5
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 2.8e-79 299.7 321 55.5
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 6.2e-79 298.5 320 57.8
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 6.2e-79 298.5 335 56.7
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 8.1e-79 298.1 301 58.8
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 8.1e-79 298.1 326 56.7
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 1.8e-78 297.0 344 56.1
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 1.8e-78 297.0 325 57.8
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 2.4e-78 296.6 329 55.6
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 4.0e-78 295.8 320 55.3
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 5.3e-78 295.4 388 50.3
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 9.0e-78 294.7 324 57.4
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 1.2e-77 294.3 331 52.0
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 2.0e-77 293.5 320 55.9
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 2.0e-77 293.5 386 50.3
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 2.0e-77 293.5 384 48.4
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 2.0e-77 293.5 336 56.2
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 3.4e-77 292.7 318 51.3
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 3.4e-77 292.7 336 53.6
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 4.5e-77 292.4 319 53.9
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 5.8e-77 292.0 341 51.0
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 1.0e-76 291.2 321 58.3
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 2.2e-76 290.0 331 51.4
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 2.9e-76 289.7 321 53.3
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 2.9e-76 289.7 329 55.6
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 4.9e-76 288.9 242 59.1
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 1.4e-75 287.3 403 48.6
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 1.9e-75 287.0 351 53.3
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 1.9e-75 287.0 330 54.8
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 5.5e-75 285.4 324 56.2
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 7.1e-75 285.0 327 55.0
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 7.1e-75 285.0 333 53.8
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 7.1e-75 285.0 319 54.2
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 1.2e-74 284.3 331 55.3
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 1.2e-74 284.3 204 70.1
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 2.1e-74 283.5 319 52.0
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 4.6e-74 282.3 323 55.7
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 7.9e-74 281.6 320 53.1
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 3.0e-73 279.6 360 49.7
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 5.1e-73 278.9 342 52.3
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 6.7e-73 278.5 337 55.8
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 1.5e-72 277.3 319 53.0
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 2.5e-72 276.6 331 54.4
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 1.6e-71 273.9 320 52.8
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 3.7e-71 272.7 326 52.8
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 3.7e-71 272.7 345 49.3
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 4.8e-71 272.3 319 53.0
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 8.2e-71 271.6 315 48.9
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 8.5e-68 261.5 324 48.1
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 1.1e-67 261.2 229 62.0
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 2.7e-66 256.5 164 75.0
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 7.9e-66 255.0 229 61.1
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 1.6e-63 247.3 376 45.5
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 6.9e-62 241.9 323 50.5
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 2.9e-60 236.5 141 83.0
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 3.2e-59 233.0 135 79.3
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 1.6e-58 230.7 328 45.1
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 3.0e-49 199.9 347 38.0
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 2.6e-48 196.8 286 50.0
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 3.7e-47 193.0 318 43.7
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 3.2e-43 179.9 208 47.1
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 4.7e-42 176.0 244 41.4
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 1.4e-41 174.5 217 44.7
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 3.0e-41 173.3 175 45.7
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 7.5e-40 168.7 112 74.1
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 6.3e-31 139.0 230 34.8
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 1.8e-25 120.9 179 38.0
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 1.1e-22 111.7 217 32.7
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 4.5e-21 106.3 64 75.0
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 9.5e-19 98.6 180 34.4
Cpa.g.sc84.3 Carica papaya HOM05D006549 ORTHO05D008080 3.6e-18 96.7 58 79.3
CSS0036252 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 4.0e-17 93.2 64 68.8


User provided reference genes

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