Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju3590A0T10 Lonicera japonica HOM05D003177 ORTHO05D003481 3.4e-49 198.4 126 100.0
Lj1C863T22 Lonicera japonica HOM05D003177 ORTHO05D003481 2.1e-19 99.4 109 54.1
vmacro11767 Vaccinium macrocarpon HOM05D003177 ORTHO05D003481 1.9e-12 76.3 94 47.9
TAR629G1976 Trochodendron aralioides HOM05D003177 ORTHO05D003481 1.3e-11 73.6 111 41.4
CSS0012105 Camellia sinensis var. sinensis HOM05D003177 ORTHO05D003481 6.2e-11 71.2 134 38.8
Cc05_g13250 Coffea canephora HOM05D003177 ORTHO05D003481 1.8e-10 69.7 108 40.7
MSTRG.14415 Avicennia marina HOM05D003177 ORTHO05D003481 4.0e-10 68.6 109 41.3
DCAR_008676 Daucus carota HOM05D003177 ORTHO05D003481 6.9e-10 67.8 109 43.1
CSS0025638 Camellia sinensis var. sinensis HOM05D003177 ORTHO05D003481 9.0e-10 67.4 106 42.5
Nn1g03661 Nelumbo nucifera HOM05D003177 ORTHO05D003481 1.2e-09 67.0 108 40.7
SGA_v2.0_scaffold9G05037 Striga asiatica HOM05D003177 ORTHO05D003481 1.5e-09 66.6 133 34.6
Migut.H01856 Erythranthe guttata HOM05D003177 ORTHO05D003481 2.0e-09 66.2 134 39.6
GSVIVG01014607001 Vitis vinifera HOM05D003177 ORTHO05D003481 2.0e-09 66.2 109 43.1
Cpa.g.sc97.68 Carica papaya HOM05D003177 ORTHO05D003481 5.8e-09 64.7 109 38.5
Actinidia35317 Actinidia chinensis HOM05D003177 ORTHO05D003481 9.9e-09 63.9 108 38.9
Aqoxy4G02069 Aquilegia oxysepala HOM05D003177 ORTHO05D003481 1.7e-08 63.2 108 34.3
CiPaw.11G183800 Carya illinoinensis HOM05D003177 ORTHO05D003481 1.7e-08 63.2 109 37.6
Gohir.D01G061200 Gossypium hirsutum HOM05D003177 ORTHO05D003481 1.7e-08 63.2 109 38.5
Gorai.002G082600 Gossypium raimondii HOM05D003177 ORTHO05D003481 1.7e-08 63.2 109 38.5
ECA246G0280 Erigeron canadensis HOM05D003177 ORTHO05D003481 2.2e-08 62.8 109 39.4
Gohir.A01G074600 Gossypium hirsutum HOM05D003177 ORTHO05D003481 2.2e-08 62.8 109 38.5
QL08p013320 Quercus lobata HOM05D003177 ORTHO05D003481 2.9e-08 62.4 201 28.9
Ciclev10008545m.g Citrus clementina HOM05D003177 ORTHO05D003481 3.8e-08 62.0 109 36.7
Sc19g0005940 Simmondsia chinensis HOM05D003177 ORTHO05D003481 3.8e-08 62.0 201 28.4
Peaxi162Scf01086g00156 Petunia axillaris HOM05D003177 ORTHO05D003481 4.9e-08 61.6 109 38.5
Potri.001G417400 Populus trichocarpa HOM05D003177 ORTHO05D003481 6.4e-08 61.2 201 28.4
arahy.Tifrunner.gnm1.ann1.P5VPT7 Arachis hypogaea HOM05D003177 ORTHO05D003481 8.4e-08 60.8 157 31.2
Duzib213G0670 Durio zibethinus HOM05D003177 ORTHO05D003481 1.1e-07 60.5 37 75.7
CANSAT11G2707 Cannabis sativa HOM05D003177 ORTHO05D003481 2.4e-07 59.3 109 34.9
Nitab4.5_0000397g0040 Nicotiana tabacum HOM05D003177 ORTHO05D003481 4.2e-07 58.5 133 35.3
Nitab4.5_0009192g0010 Nicotiana tabacum HOM05D003177 ORTHO05D003481 4.2e-07 58.5 133 35.3
PGSC0003DMG400019225 Solanum tuberosum HOM05D003177 ORTHO05D003481 5.5e-07 58.2 109 35.8
COL.COLO4_09572 Corchorus olitorius HOM05D003177 ORTHO05D003481 9.3e-07 57.4 135 34.1
Sopen07g032250 Solanum pennellii HOM05D003177 ORTHO05D003481 1.2e-06 57.0 109 35.8
Duzib268G0600 Durio zibethinus HOM05D003177 ORTHO05D003481 2.1e-06 56.2 134 32.8
CAN.G337.147 Capsicum annuum HOM05D003177 ORTHO05D003481 3.5e-06 55.5 109 33.9
Ah.06g183030 Amaranthus hybridus HOM05D003177 ORTHO05D003481 4.6e-06 55.1 109 34.9
unitig_749.g13972 Utricularia gibba HOM05D003177 ORTHO05D003481 6.0e-06 54.7 124 33.1
Cfa020414 Carpinus fangiana HOM05D003177 ORTHO05D003481 7.9e-06 54.3 37 70.3
Haze_09611 Corylus avellana HOM05D003177 ORTHO05D003481 7.9e-06 54.3 37 70.3
Manes.03G122901 Manihot esculenta HOM05D003177 ORTHO05D003481 7.9e-06 54.3 109 35.8


User provided reference genes

Program Settings