Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju357C0G0 Lonicera japonica HOM05D004308 ORTHO05D005139 3.5e-138 495.0 252 100.0
Lj9C99G0 Lonicera japonica HOM05D004308 ORTHO05D005139 1.4e-107 393.3 370 61.6
Lju963A1G2 Lonicera japonica HOM05D004308 ORTHO05D005139 1.3e-105 386.7 290 75.5
Dinv13431 Davidia involucrata HOM05D004308 ORTHO05D005139 2.5e-75 286.2 377 47.2
Hma1.2p1_0972F.1_g242793 Hydrangea macrophylla HOM05D004308 ORTHO05D005139 1.7e-68 263.5 340 47.1
QL01p008001 Quercus lobata HOM05D004308 ORTHO05D005139 3.2e-67 259.2 365 43.0
Rhsim13G0230300 Rhododendron simsii HOM05D004308 ORTHO05D005139 2.1e-66 256.5 368 43.8
TAR369G0492 Trochodendron aralioides HOM05D004308 ORTHO05D005139 1.0e-65 254.2 373 43.7
GSVIVG01025407001 Vitis vinifera HOM05D004308 ORTHO05D005139 1.5e-64 250.4 370 42.2
CiPaw.13G173300 Carya illinoinensis HOM05D004308 ORTHO05D005139 7.4e-64 248.1 365 42.7
AUR62019194 Chenopodium quinoa HOM05D004308 ORTHO05D005139 1.7e-63 246.9 329 46.5
Hund21645 Selenicereus undatus HOM05D004308 ORTHO05D005139 6.3e-63 245.0 368 42.9
SGA_v2.0_scaffold28G11761 Striga asiatica HOM05D004308 ORTHO05D005139 1.4e-62 243.8 364 42.9
Actinidia06853 Actinidia chinensis HOM05D004308 ORTHO05D005139 2.4e-62 243.0 366 41.8
Migut.I00336 Erythranthe guttata HOM05D004308 ORTHO05D005139 3.1e-62 242.7 350 42.9
Sabra03G0162000 Salix brachista HOM05D004308 ORTHO05D005139 3.1e-62 242.7 338 45.0
CSS0019756 Camellia sinensis var. sinensis HOM05D004308 ORTHO05D005139 5.3e-62 241.9 375 42.4
Aqoxy7G00472 Aquilegia oxysepala HOM05D004308 ORTHO05D005139 7.0e-62 241.5 370 41.9
CiPaw.13G173400 Carya illinoinensis HOM05D004308 ORTHO05D005139 9.1e-62 241.1 365 41.6
AUR62000023 Chenopodium quinoa HOM05D004308 ORTHO05D005139 1.5e-61 240.4 363 43.0
Prupe.6G010000 Prunus persica HOM05D004308 ORTHO05D005139 2.0e-61 240.0 377 41.1
TWI32G0511 Tripterygium wilfordii HOM05D004308 ORTHO05D005139 5.9e-61 238.4 367 40.6
MD03G1008000 Malus domestica HOM05D004308 ORTHO05D005139 7.7e-61 238.0 366 42.1
MD12G1151800 Malus domestica HOM05D004308 ORTHO05D005139 1.0e-60 237.7 370 41.4
ECA238G0198 Erigeron canadensis HOM05D004308 ORTHO05D005139 1.7e-60 236.9 363 39.9
Thecc.09G212800 Theobroma cacao HOM05D004308 ORTHO05D005139 1.7e-60 236.9 367 42.5
arahy.Tifrunner.gnm1.ann1.6VJH5B Arachis hypogaea HOM05D004308 ORTHO05D005139 2.2e-60 236.5 376 39.1
FAN21G1794 Fragaria x ananassa HOM05D004308 ORTHO05D005139 2.9e-60 236.1 382 40.6
FAN25G2014 Fragaria x ananassa HOM05D004308 ORTHO05D005139 1.4e-59 233.8 383 41.0
FvH4_3g44841 Fragaria vesca HOM05D004308 ORTHO05D005139 3.2e-59 232.6 372 40.9
FAN11G1034 Fragaria x ananassa HOM05D004308 ORTHO05D005139 3.2e-59 232.6 372 40.9
Lju366A0G8 Lonicera japonica HOM05D004308 ORTHO05D005139 3.2e-59 232.6 121 93.4
Potri.003G216900 Populus trichocarpa HOM05D004308 ORTHO05D005139 3.2e-59 232.6 370 40.5
SalBow5G0018 Salvia bowleyana HOM05D004308 ORTHO05D005139 4.2e-59 232.3 364 41.8
Manes.17G081200 Manihot esculenta HOM05D004308 ORTHO05D005139 7.2e-59 231.5 373 41.0
Solyc01g006000.3 Solanum lycopersicum HOM05D004308 ORTHO05D005139 7.2e-59 231.5 370 40.8
Sopen01g002010 Solanum pennellii HOM05D004308 ORTHO05D005139 1.2e-58 230.7 368 40.2
Lj9A102G3 Lonicera japonica HOM05D004308 ORTHO05D005139 1.6e-58 230.3 121 91.7
Duzib177G0548 Durio zibethinus HOM05D004308 ORTHO05D005139 2.7e-58 229.6 356 41.9
Duzib177G1053 Durio zibethinus HOM05D004308 ORTHO05D005139 2.7e-58 229.6 356 41.9
PGSC0003DMG400032139 Solanum tuberosum HOM05D004308 ORTHO05D005139 2.7e-58 229.6 373 39.9
Ah.06g193030 Amaranthus hybridus HOM05D004308 ORTHO05D005139 2.3e-57 226.5 367 40.9
Psat7g130280 Pisum sativum HOM05D004308 ORTHO05D005139 2.3e-57 226.5 368 39.9
CAN.G158.6 Capsicum annuum HOM05D004308 ORTHO05D005139 3.0e-57 226.1 371 39.4
PSO063G3498 Papaver somniferum HOM05D004308 ORTHO05D005139 3.0e-57 226.1 370 40.5
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 3.9e-57 225.7 366 39.6
Ciclev10015009m.g Citrus clementina HOM05D004308 ORTHO05D005139 5.2e-57 225.3 364 40.9
Haze_22983 Corylus avellana HOM05D004308 ORTHO05D005139 8.8e-57 224.6 371 41.0
HanXRQChr07g0196751 Helianthus annuus HOM05D004308 ORTHO05D005139 1.1e-56 224.2 352 38.6
TPR.G20984 Trifolium pratense HOM05D004308 ORTHO05D005139 1.1e-56 224.2 368 40.5
Lalb_Chr05g0219691 Lupinus albus HOM05D004308 ORTHO05D005139 1.5e-56 223.8 359 40.7
Sed0009913 Sechium edule HOM05D004308 ORTHO05D005139 1.5e-56 223.8 366 39.6
DCAR_001990 Daucus carota HOM05D004308 ORTHO05D005139 2.6e-56 223.0 368 39.1
Gohir.A10G002400 Gossypium hirsutum HOM05D004308 ORTHO05D005139 2.6e-56 223.0 366 40.2
ClCG01G010120 Citrullus lanatus HOM05D004308 ORTHO05D005139 3.3e-56 222.6 358 40.2
ClCG08G005760 Citrullus lanatus HOM05D004308 ORTHO05D005139 3.3e-56 222.6 362 39.8
CiPaw.13G173800 Carya illinoinensis HOM05D004308 ORTHO05D005139 4.4e-56 222.2 335 43.6
vmacro11846 Vaccinium macrocarpon HOM05D004308 ORTHO05D005139 4.4e-56 222.2 433 37.0
RcHm_v2.0_Chr5g0081551 Rosa chinensis HOM05D004308 ORTHO05D005139 5.7e-56 221.9 366 39.6
Gorai.011G002800 Gossypium raimondii HOM05D004308 ORTHO05D005139 9.7e-56 221.1 366 39.9
Lju963A2G3 Lonicera japonica HOM05D004308 ORTHO05D005139 1.3e-55 220.7 121 89.3
Nitab4.5_0001059g0010 Nicotiana tabacum HOM05D004308 ORTHO05D005139 1.3e-55 220.7 370 40.0
PSO782G3227 Papaver somniferum HOM05D004308 ORTHO05D005139 1.3e-55 220.7 376 40.2
Glyma.07G221600 Glycine max HOM05D004308 ORTHO05D005139 2.2e-55 219.9 365 39.2
Medtr4g084070 Medicago truncatula HOM05D004308 ORTHO05D005139 2.2e-55 219.9 360 40.0
Cc00_g18210 Coffea canephora HOM05D004308 ORTHO05D005139 2.8e-55 219.5 376 38.0
Atru.chr1.4126 Acer truncatum HOM05D004308 ORTHO05D005139 3.7e-55 219.2 367 39.2
MBI13_g29631_MAGBIO Magnolia biondii HOM05D004308 ORTHO05D005139 3.7e-55 219.2 364 39.6
Phvul.002G098000 Phaseolus vulgaris HOM05D004308 ORTHO05D005139 6.3e-55 218.4 360 38.9
Lju2253C0T1 Lonicera japonica HOM05D004308 ORTHO05D005139 1.4e-54 217.2 121 93.4
Phvul.009G191800 Phaseolus vulgaris HOM05D004308 ORTHO05D005139 1.8e-54 216.9 357 38.9
Aa31LG1G2850 Aethionema arabicum HOM05D004308 ORTHO05D005139 2.4e-54 216.5 371 38.0
Lju366C0T1 Lonicera japonica HOM05D004308 ORTHO05D005139 4.1e-54 215.7 121 92.6
Lju1040C2G10 Lonicera japonica HOM05D004308 ORTHO05D005139 7.0e-54 214.9 113 92.9
LjContig00141g0028139 Lotus japonicus HOM05D004308 ORTHO05D005139 9.1e-54 214.5 359 39.6
VMungo0251G2308 Vigna mungo HOM05D004308 ORTHO05D005139 1.2e-53 214.2 360 38.9
Sp1g10500 Schrenkiella parvula HOM05D004308 ORTHO05D005139 2.6e-53 213.0 380 36.3
MELO3C015647.2 Cucumis melo HOM05D004308 ORTHO05D005139 3.5e-53 212.6 362 39.2
CsaV3_1G042220 Cucumis sativus L. HOM05D004308 ORTHO05D005139 3.5e-53 212.6 362 39.0
BcaB03g13224 Brassica carinata HOM05D004308 ORTHO05D005139 4.5e-53 212.2 377 36.3
Lj3g0012221 Lotus japonicus HOM05D004308 ORTHO05D005139 4.5e-53 212.2 359 38.7
BolC8t52327H Brassica oleracea HOM05D004308 ORTHO05D005139 5.9e-53 211.8 380 36.1
Carub.0001s1154 Capsella rubella HOM05D004308 ORTHO05D005139 2.2e-52 209.9 381 37.3
A09p64290 Brassica napus HOM05D004308 ORTHO05D005139 3.8e-52 209.1 380 35.5
BraA09t41772Z Brassica rapa HOM05D004308 ORTHO05D005139 3.8e-52 209.1 380 35.5
Thhalv10007452m.g Eutrema salsugineum HOM05D004308 ORTHO05D005139 5.0e-52 208.8 380 35.8
THA.LOC104811063 Tarenaya hassleriana HOM05D004308 ORTHO05D005139 5.0e-52 208.8 370 37.6
arahy.Tifrunner.gnm1.ann1.SIQ1MV Arachis hypogaea HOM05D004308 ORTHO05D005139 6.5e-52 208.4 370 37.3
AL1G23050 Arabidopsis lyrata HOM05D004308 ORTHO05D005139 8.5e-52 208.0 391 36.1
C08p47900 Brassica napus HOM05D004308 ORTHO05D005139 1.5e-51 207.2 380 35.5
Peaxi162Scf00100g00724 Petunia axillaris HOM05D004308 ORTHO05D005139 3.2e-51 206.1 401 35.9
Ca_18762_v3 Cicer arietinum L. HOM05D004308 ORTHO05D005139 5.5e-51 205.3 299 42.8
EL10Ac4g10352 Beta vulgaris HOM05D004308 ORTHO05D005139 7.2e-51 204.9 364 40.4
Lj9C97T10 Lonicera japonica HOM05D004308 ORTHO05D005139 9.4e-51 204.5 121 89.3
C08p15000 Brassica napus HOM05D004308 ORTHO05D005139 1.6e-50 203.8 378 36.2
BolC8t49130H Brassica oleracea HOM05D004308 ORTHO05D005139 1.6e-50 203.8 378 36.2
A08p33180 Brassica napus HOM05D004308 ORTHO05D005139 1.4e-49 200.7 376 35.4
BraA08t35236Z Brassica rapa HOM05D004308 ORTHO05D005139 1.4e-49 200.7 376 35.4
Lsat_1_v5_gn_3_32861 Lactuca sativa HOM05D004308 ORTHO05D005139 4.0e-49 199.1 361 38.0
Eucgr.F02225 Eucalyptus grandis HOM05D004308 ORTHO05D005139 2.0e-48 196.8 351 36.2
CiPaw.13G173500 Carya illinoinensis HOM05D004308 ORTHO05D005139 8.3e-47 191.4 114 78.1
QL01p010377 Quercus lobata HOM05D004308 ORTHO05D005139 1.1e-46 191.0 115 79.1
CiPaw.13G174000 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.4e-46 190.7 139 66.9
CiPaw.13G173600 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.8e-46 190.3 114 77.2
Gohir.D10G002400 Gossypium hirsutum HOM05D004308 ORTHO05D005139 9.1e-46 188.0 113 77.9
HPP92_026953 Vanilla planifolia HOM05D004308 ORTHO05D005139 1.6e-45 187.2 348 35.9
ATR0598G220 Amborella trichopoda HOM05D004308 ORTHO05D005139 1.3e-44 184.1 303 38.9
AT1G11880 Arabidopsis thaliana HOM05D004308 ORTHO05D005139 9.4e-43 177.9 119 68.9
MD14G1141900 Malus domestica HOM05D004308 ORTHO05D005139 1.2e-42 177.6 116 69.8
Os12g0498700 Oryza sativa ssp. japonica HOM05D004308 ORTHO05D005139 2.3e-41 173.3 338 36.1
Zm00001eb162820 Zea mays HOM05D004308 ORTHO05D005139 6.8e-41 171.8 336 36.9
Lju2253A0T6 Lonicera japonica HOM05D004308 ORTHO05D005139 2.0e-40 170.2 144 68.1
Lju963C4T0 Lonicera japonica HOM05D004308 ORTHO05D005139 2.0e-40 170.2 112 83.9
Mapoly0040s0060 Marchantia polymorpha HOM05D004308 ORTHO05D005139 5.7e-40 168.7 382 32.2
CiPaw.04G144000 Carya illinoinensis HOM05D004308 ORTHO05D005139 9.8e-40 167.9 98 77.6
CANSAT78G0795 Cannabis sativa HOM05D004308 ORTHO05D005139 2.8e-39 166.4 112 69.6
MD11G1011600 Malus domestica HOM05D004308 ORTHO05D005139 7.0e-38 161.8 101 71.3
Nitab4.5_0022753g0010 Nicotiana tabacum HOM05D004308 ORTHO05D005139 1.2e-37 161.0 115 65.2
Sc09g0000270 Simmondsia chinensis HOM05D004308 ORTHO05D005139 3.5e-37 159.5 116 62.9
Lsat_1_v5_gn_4_166260 Lactuca sativa HOM05D004308 ORTHO05D005139 5.9e-37 158.7 102 69.6
Lj9A97G16 Lonicera japonica HOM05D004308 ORTHO05D005139 5.5e-35 152.1 134 62.7
CiPaw.04G144200 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.2e-34 151.0 82 82.9
unitig_749.g14167 Utricularia gibba HOM05D004308 ORTHO05D005139 6.1e-34 148.7 290 38.3
Pp3c10_8190 Physcomitrium patens HOM05D004308 ORTHO05D005139 8.0e-34 148.3 343 31.8
SEGI_38936 Sequoiadendron giganteum HOM05D004308 ORTHO05D005139 4.0e-33 146.0 121 53.7
SHI31261 Sapria himalayana HOM05D004308 ORTHO05D005139 2.6e-32 143.3 453 27.6
Lju2253C0T0 Lonicera japonica HOM05D004308 ORTHO05D005139 2.8e-31 139.8 95 84.2
Lju366C0T2 Lonicera japonica HOM05D004308 ORTHO05D005139 1.4e-30 137.5 98 80.6
SMO203G0184 Selaginella moellendorffii HOM05D004308 ORTHO05D005139 5.4e-30 135.6 366 29.5
Hma1.2p1_0972F.1_g242796 Hydrangea macrophylla HOM05D004308 ORTHO05D005139 5.9e-29 132.1 103 70.9
Nitab4.5_0000775g0120 Nicotiana tabacum HOM05D004308 ORTHO05D005139 8.6e-28 128.3 121 59.5
TAR623G1609 Trochodendron aralioides HOM05D004308 ORTHO05D005139 3.3e-27 126.3 122 58.2
Cpa.g.sc1833.2 Carica papaya HOM05D004308 ORTHO05D005139 1.2e-26 124.4 179 44.7
Lju357C1T0 Lonicera japonica HOM05D004308 ORTHO05D005139 6.1e-26 122.1 81 77.8
Lju1680A2G14 Lonicera japonica HOM05D004308 ORTHO05D005139 2.3e-25 120.2 70 91.4
Nn4g26332 Nelumbo nucifera HOM05D004308 ORTHO05D005139 6.8e-25 118.6 113 58.4
Sc09g0000260 Simmondsia chinensis HOM05D004308 ORTHO05D005139 6.8e-25 118.6 111 60.4
Lsat_1_v5_gn_3_8900 Lactuca sativa HOM05D004308 ORTHO05D005139 2.0e-24 117.1 95 58.9
COL.COLO4_34992 Corchorus olitorius HOM05D004308 ORTHO05D005139 3.7e-23 112.8 110 58.2
Lju963A4G1 Lonicera japonica HOM05D004308 ORTHO05D005139 6.4e-23 112.1 54 90.7
MD03G1008200 Malus domestica HOM05D004308 ORTHO05D005139 6.4e-23 112.1 116 52.6
Zm00001eb118570 Zea mays HOM05D004308 ORTHO05D005139 2.4e-22 110.2 294 31.3
Glyma.20G019967 Glycine max HOM05D004308 ORTHO05D005139 4.6e-21 105.9 113 46.9
CARHR012200 Cardamine hirsuta HOM05D004308 ORTHO05D005139 3.1e-17 93.2 122 44.3
CiPaw.13G173700 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.2e-16 91.3 62 74.2
SEGI_23095 Sequoiadendron giganteum HOM05D004308 ORTHO05D005139 1.5e-16 90.9 102 52.0
Gohir.A10G158900 Gossypium hirsutum HOM05D004308 ORTHO05D005139 2.6e-16 90.1 121 46.3
SEGI_23646 Sequoiadendron giganteum HOM05D004308 ORTHO05D005139 2.3e-12 77.0 87 50.6
MCO10G290 Micromonas commoda HOM05D004308 ORTHO05D005139 3.3e-11 73.2 92 41.3
Cre07.g320650 Chlamydomonas reinhardtii HOM05D004308 ORTHO05D005139 7.3e-11 72.0 65 46.2
CiPaw.13G174100 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.4e-09 67.8 84 50.0
Lj9A108T0 Lonicera japonica HOM05D004308 ORTHO05D005139 3.2e-06 56.6 25 100.0
PRCOL_00002453 Prasinoderma coloniale HOM05D004308 ORTHO05D005139 3.2e-06 56.6 62 50.0


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