Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 6.6e-148 527.3 264 100.0
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.5e-78 296.2 271 60.1
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 5.9e-72 275.0 272 55.5
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 1.6e-69 266.9 272 54.8
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 4.0e-68 262.3 264 54.9
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 9.8e-67 257.7 272 51.1
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 3.7e-66 255.8 271 52.0
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 1.4e-65 253.8 271 51.7
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 3.2e-65 252.7 272 52.6
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 2.0e-64 250.0 272 52.6
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.7e-63 246.9 271 52.0
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 3.0e-63 246.1 272 51.8
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.9e-63 245.7 272 50.4
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 3.9e-63 245.7 273 51.3
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 1.9e-62 243.4 271 50.6
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.9e-62 243.4 272 51.1
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 7.3e-62 241.5 265 52.5
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 9.5e-62 241.1 271 50.2
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.2e-61 240.7 272 50.7
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 6.2e-61 238.4 283 49.1
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 8.1e-61 238.0 273 50.9
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 1.4e-60 237.3 272 49.3
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.3e-60 236.5 274 48.2
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 4.0e-60 235.7 271 49.1
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 4.0e-60 235.7 271 49.1
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 6.8e-60 235.0 271 49.4
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 6.8e-60 235.0 272 47.8
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 8.9e-60 234.6 273 48.7
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.2e-59 234.2 271 47.2
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.0e-59 233.4 272 46.7
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 2.6e-59 233.0 271 46.5
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 3.4e-59 232.6 265 49.4
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 3.4e-59 232.6 272 47.4
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 4.4e-59 232.3 264 49.6
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 8.3e-58 228.0 271 47.6
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 2.4e-57 226.5 269 46.5
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 3.2e-57 226.1 264 49.6
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.2e-57 226.1 271 47.6
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 5.4e-57 225.3 271 47.6
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.4e-57 225.3 271 47.6
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 9.2e-57 224.6 264 48.9
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.1e-56 223.4 279 46.6
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 2.7e-56 223.0 264 48.1
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 3.5e-56 222.6 272 45.6
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 6.0e-56 221.9 272 46.7
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 1.0e-55 221.1 268 45.9
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.0e-55 221.1 274 46.7
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.0e-55 221.1 271 46.1
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 3.0e-55 219.5 265 46.8
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 3.9e-55 219.2 262 49.6
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 5.1e-55 218.8 271 45.8
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 1.5e-54 217.2 264 45.5
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.5e-54 217.2 265 46.8
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.5e-54 217.2 264 46.6
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.5e-54 217.2 272 45.2
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 1.9e-54 216.9 277 46.2
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 4.3e-54 215.7 264 45.5
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 1.6e-53 213.8 272 44.9
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 2.8e-53 213.0 268 45.5
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 2.8e-53 213.0 271 44.6
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 6.2e-53 211.8 269 45.4
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 6.2e-53 211.8 268 46.3
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 1.1e-52 211.1 270 44.8
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.1e-52 211.1 270 45.2
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 1.4e-52 210.7 270 45.2
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 1.8e-52 210.3 265 46.0
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 2.3e-52 209.9 271 45.0
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 3.1e-52 209.5 270 44.1
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 5.2e-52 208.8 272 44.9
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 6.8e-52 208.4 269 45.7
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.2e-51 207.6 264 45.8
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 2.0e-51 206.8 270 43.7
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 2.6e-51 206.5 264 46.6
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 2.6e-51 206.5 264 46.6
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 5.8e-51 205.3 205 58.5
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 7.6e-51 204.9 269 44.6
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 7.6e-51 204.9 266 45.9
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 1.3e-50 204.1 264 45.8
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 2.2e-50 203.4 264 45.5
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.2e-50 203.4 275 44.0
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 2.9e-50 203.0 266 45.1
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 3.7e-50 202.6 268 43.7
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 3.7e-50 202.6 264 45.5
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 1.1e-49 201.1 264 44.7
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.9e-49 200.3 264 43.2
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 2.4e-49 199.9 266 44.4
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 2.4e-49 199.9 264 44.3
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 2.4e-49 199.9 264 44.3
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 4.1e-49 199.1 107 93.5
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 1.6e-48 197.2 261 42.9
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 8.6e-47 191.4 264 42.4
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 9.6e-46 188.0 261 40.6
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.6e-45 187.2 157 62.4
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 4.7e-45 185.7 264 39.4
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 6.2e-45 185.3 172 57.6
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 8.1e-45 184.9 281 38.8
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.4e-44 184.1 281 38.8
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 3.8e-42 176.0 232 43.1
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 7.8e-40 168.3 265 40.0
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.7e-34 150.6 240 40.0
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 1.7e-31 140.6 158 48.7
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 4.3e-30 136.0 120 61.7
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 7.4e-30 135.2 254 37.0
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 2.4e-28 130.2 273 32.6
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 2.6e-27 126.7 120 57.5
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 4.5e-27 125.9 152 45.4
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 1.7e-26 124.0 264 36.7
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.4e-25 120.9 119 53.8
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 3.0e-23 113.2 120 50.8
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 5.1e-23 112.5 120 50.8
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.5e-22 110.2 120 50.8
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 3.3e-22 109.8 120 50.0
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 9.6e-22 108.2 120 49.2
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 8.1e-21 105.1 185 37.3
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 4.2e-17 92.8 123 47.2
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 3.3e-14 83.2 142 33.1
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 8.2e-13 78.6 266 23.7
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 5.3e-12 75.9 69 52.2
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.3e-07 60.5 37 73.0
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 4.3e-06 56.2 71 46.5
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 5.7e-06 55.8 58 44.8


User provided reference genes

Program Settings