Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.2e-129 466.5 229 100.0
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.0e-128 463.4 229 99.6
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 8.1e-110 400.6 224 85.7
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 9.0e-109 397.1 227 83.3
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 9.9e-108 393.7 218 85.3
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.3e-107 393.3 228 82.0
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 6.4e-107 391.0 229 80.3
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 8.4e-107 390.6 229 83.0
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.1e-106 390.2 228 78.9
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.1e-106 390.2 229 80.3
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 3.2e-106 388.7 229 79.5
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 3.9e-104 381.7 227 78.9
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 3.9e-104 381.7 224 80.4
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 6.7e-104 380.9 222 82.4
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 1.1e-103 380.2 229 78.6
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.5e-103 379.0 227 78.4
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 9.6e-103 377.1 226 81.4
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.3e-102 376.7 215 81.9
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 1.6e-102 376.3 216 81.0
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 2.1e-102 375.9 215 80.9
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 8.2e-102 374.0 220 80.0
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.1e-101 373.6 226 78.3
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.4e-101 373.2 225 79.1
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 2.4e-101 372.5 215 79.1
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 6.9e-101 370.9 216 78.2
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 6.9e-101 370.9 226 77.4
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 9.0e-101 370.5 224 78.1
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.5e-100 369.8 219 78.5
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 2.0e-100 369.4 232 77.6
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 2.0e-100 369.4 227 75.8
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 4.5e-100 368.2 224 76.8
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 5.8e-100 367.9 218 77.1
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 5.8e-100 367.9 219 77.6
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 5.8e-100 367.9 216 79.6
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 7.6e-100 367.5 227 76.2
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.3e-99 366.7 214 79.0
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 1.3e-99 366.7 226 75.7
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.3e-99 366.7 216 79.2
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 2.9e-99 365.5 227 75.8
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.9e-99 365.5 216 78.7
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 4.9e-99 364.8 215 79.5
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.4e-98 363.2 214 78.0
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 1.4e-98 363.2 227 77.1
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.9e-98 362.8 223 75.8
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 2.5e-98 362.5 215 77.7
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 3.2e-98 362.1 209 80.9
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 3.2e-98 362.1 216 77.8
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 4.2e-98 361.7 224 75.4
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 7.1e-98 360.9 224 75.4
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 7.1e-98 360.9 216 76.4
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 7.1e-98 360.9 231 75.3
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 1.2e-97 360.1 221 76.0
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 2.1e-97 359.4 221 75.6
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 3.5e-97 358.6 219 74.4
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 4.6e-97 358.2 226 75.2
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 6.0e-97 357.8 219 73.5
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 6.0e-97 357.8 226 75.2
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.8e-96 356.3 223 73.1
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.1e-95 353.6 219 73.1
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 1.9e-95 352.8 217 75.6
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 7.4e-95 350.9 220 72.7
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 7.4e-95 350.9 215 74.9
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 7.4e-95 350.9 214 74.3
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 9.7e-95 350.5 224 71.9
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 1.3e-94 350.1 224 71.9
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.3e-94 350.1 223 70.9
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.6e-94 349.7 215 74.9
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 2.2e-94 349.4 224 71.4
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 2.2e-94 349.4 223 72.2
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 2.2e-94 349.4 218 73.4
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 2.8e-94 349.0 224 71.4
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 3.7e-94 348.6 219 72.1
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 3.7e-94 348.6 219 72.1
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 3.7e-94 348.6 223 71.3
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 4.8e-94 348.2 218 72.5
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 4.8e-94 348.2 226 71.7
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 6.3e-94 347.8 316 57.3
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.2e-94 347.4 252 68.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.4e-93 346.7 218 72.0
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.4e-93 346.7 218 72.0
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.4e-93 346.7 218 73.4
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.4e-93 346.7 219 70.8
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 1.8e-93 346.3 216 74.5
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 2.4e-93 345.9 205 77.6
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.1e-93 345.1 223 70.9
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 4.1e-93 345.1 201 79.1
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.5e-92 343.2 229 69.9
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 2.0e-92 342.8 227 68.7
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.0e-92 342.8 215 72.1
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.4e-92 342.0 239 70.7
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 4.5e-92 341.7 215 71.6
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 1.9e-90 336.3 223 69.5
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 5.5e-90 334.7 223 69.1
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 7.9e-89 330.9 216 69.9
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.5e-87 326.6 267 61.8
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 2.8e-86 322.4 212 71.7
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 3.1e-85 318.9 215 66.5
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 7.9e-81 304.3 205 70.7
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 7.9e-81 304.3 216 66.7
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 4.4e-79 298.5 174 80.5
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 2.8e-78 295.8 165 82.4
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 2.4e-77 292.7 174 77.6
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.3e-70 270.4 215 61.4
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 7.0e-69 264.6 215 58.6
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.6e-68 262.7 216 60.6
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 9.7e-63 244.2 215 55.3
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 2.7e-57 226.1 139 74.1
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 2.8e-54 216.1 176 61.9
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 2.6e-47 193.0 101 85.1
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 2.9e-43 179.5 213 46.0
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.2e-41 174.1 126 65.9
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 5.2e-40 168.7 212 43.9
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 6.4e-38 161.8 108 72.2
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 1.3e-35 154.1 208 43.8
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.5e-34 149.8 91 81.3
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.5e-34 149.8 91 81.3
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.3e-34 149.4 213 40.4
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 7.3e-34 148.3 93 75.3
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.6e-33 147.1 93 76.3
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 6.4e-30 135.2 110 61.8
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 2.7e-28 129.8 130 54.6
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 2.7e-28 129.8 130 54.6
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.0e-27 126.3 96 67.7
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-26 124.0 79 74.7
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.4e-23 112.8 63 81.0
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.3e-22 110.9 79 69.6
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.7e-22 109.4 82 67.1
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 7.3e-18 95.1 186 36.0
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.9e-16 88.2 175 33.7
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.0e-15 87.0 52 73.1
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.7e-14 84.0 187 32.6
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 4.9e-14 82.4 48 79.2
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 3.3e-10 69.7 50 68.0


User provided reference genes

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