Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju170A31T10 Lonicera japonica HOM05D016202 ORTHO05D006406 2.9e-106 388.7 207 100.0
Lj9A5T14 Lonicera japonica HOM05D016202 ORTHO05D006406 1.3e-61 240.4 151 88.1
Lju170A28T4 Lonicera japonica HOM05D016202 ORTHO05D006406 3.6e-40 169.1 152 68.4
Lju1034A2T22 Lonicera japonica HOM05D016202 ORTHO05D006406 2.7e-35 152.9 101 84.2
Lju1609C0G6 Lonicera japonica HOM05D016202 ORTHO05D006406 5.2e-23 112.1 83 78.3
Lju225A6T16 Lonicera japonica HOM05D016202 ORTHO05D006406 2.3e-18 96.7 186 41.9
Lju114A5T28 Lonicera japonica HOM05D005855 ORTHO05D006406 3.1e-15 86.3 188 41.0
Lju1034A1T6 Lonicera japonica HOM05D016202 ORTHO05D234816 8.9e-15 84.7 83 65.1
Lju1609C0T10 Lonicera japonica HOM05D005855 ORTHO05D006406 2.6e-14 83.2 77 66.2
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 4.4e-14 82.4 219 36.1
Lj1C955T6 Lonicera japonica HOM05D016202 ORTHO05D006406 3.5e-11 72.8 78 56.4
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 2.3e-10 70.1 79 53.2
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 1.5e-09 67.4 85 51.8
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 2.5e-09 66.6 76 55.3
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 2.5e-09 66.6 81 50.6
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 4.3e-09 65.9 85 48.2
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 5.6e-09 65.5 209 30.6
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 2.1e-08 63.5 82 45.1
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 3.6e-08 62.8 79 48.1
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 4.7e-08 62.4 85 47.1
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 6.2e-08 62.0 85 47.1
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.1e-07 61.2 87 43.7
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.1e-07 61.2 87 43.7
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 1.1e-07 61.2 85 47.1
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 2.4e-07 60.1 82 43.9
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 5.3e-07 58.9 82 43.9
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 6.9e-07 58.5 81 45.7
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 9.0e-07 58.2 87 42.5
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 9.0e-07 58.2 81 46.9
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 1.5e-06 57.4 80 46.2
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 1.5e-06 57.4 80 45.0
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 2.0e-06 57.0 79 43.0
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 3.4e-06 56.2 74 51.4
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 4.4e-06 55.8 77 44.2
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 4.4e-06 55.8 77 44.2
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 5.8e-06 55.5 74 48.6
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 5.8e-06 55.5 78 44.9


User provided reference genes

Program Settings