Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 7.1e-59 230.3 111 100.0
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 4.9e-52 207.6 100 96.0
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 6.9e-46 187.2 108 84.3
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 3.4e-45 184.9 108 79.6
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 1.7e-44 182.6 108 78.7
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 2.9e-44 181.8 108 80.6
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 6.4e-44 180.6 108 80.6
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 1.1e-43 179.9 108 77.8
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 1.1e-43 179.9 108 78.7
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.9e-43 179.1 108 77.8
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 4.2e-43 177.9 108 75.9
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 4.2e-43 177.9 108 76.9
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 5.4e-43 177.6 108 78.7
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 5.4e-43 177.6 108 75.0
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.4e-43 177.6 108 75.0
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.4e-43 177.6 108 75.0
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 5.4e-43 177.6 108 77.8
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 7.1e-43 177.2 108 77.8
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 1.6e-42 176.0 108 74.1
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 2.1e-42 175.6 108 75.9
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 2.1e-42 175.6 108 77.8
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 2.1e-42 175.6 108 76.9
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 2.7e-42 175.3 108 75.9
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 2.7e-42 175.3 108 75.9
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 2.7e-42 175.3 111 74.8
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 3.5e-42 174.9 108 72.2
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 4.6e-42 174.5 108 75.0
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 6.0e-42 174.1 108 76.9
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 6.0e-42 174.1 108 75.0
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 6.0e-42 174.1 108 73.1
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 7.8e-42 173.7 108 73.1
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 7.8e-42 173.7 108 75.0
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 1.0e-41 173.3 108 75.9
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 1.7e-41 172.6 108 74.1
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.3e-41 172.2 108 72.2
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 3.0e-41 171.8 108 71.3
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 5.1e-41 171.0 111 73.9
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 5.1e-41 171.0 108 73.1
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 6.6e-41 170.6 108 76.9
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 6.6e-41 170.6 108 71.3
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 8.7e-41 170.2 108 72.2
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 1.9e-40 169.1 108 73.1
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 1.9e-40 169.1 108 75.0
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 3.3e-40 168.3 107 72.0
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 4.3e-40 167.9 109 71.6
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 4.3e-40 167.9 108 73.1
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 7.3e-40 167.2 107 72.0
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 1.3e-39 166.4 108 74.1
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.6e-39 166.0 108 70.4
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 2.8e-39 165.2 108 73.1
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 4.8e-39 164.5 111 72.1
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 8.1e-39 163.7 102 75.5
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 8.1e-39 163.7 108 66.7
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 8.1e-39 163.7 106 72.6
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 1.1e-38 163.3 108 71.3
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 1.4e-38 162.9 108 68.5
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 1.4e-38 162.9 108 68.5
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 1.4e-38 162.9 108 70.4
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 1.4e-38 162.9 108 67.6
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 1.8e-38 162.5 106 68.9
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 2.4e-38 162.2 106 66.0
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 2.4e-38 162.2 108 66.7
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 4.0e-38 161.4 108 67.6
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 4.0e-38 161.4 108 68.5
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 5.3e-38 161.0 108 67.6
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.2e-37 159.8 105 71.4
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.5e-37 159.5 105 69.5
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 1.5e-37 159.5 108 68.5
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 2.6e-37 158.7 108 68.5
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 3.4e-37 158.3 108 68.5
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.4e-37 158.3 110 70.0
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 4.5e-37 157.9 108 66.7
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 7.6e-37 157.1 108 69.4
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 9.9e-37 156.8 108 67.6
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 9.9e-37 156.8 108 69.4
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 1.3e-36 156.4 108 66.7
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 1.7e-36 156.0 108 68.5
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 2.9e-36 155.2 120 61.7
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 2.9e-36 155.2 108 65.7
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 3.8e-36 154.8 108 68.5
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 4.9e-36 154.5 108 65.7
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 4.9e-36 154.5 108 64.8
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 4.9e-36 154.5 108 64.8
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 6.4e-36 154.1 108 65.7
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 6.4e-36 154.1 108 65.7
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 6.4e-36 154.1 108 65.7
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 8.4e-36 153.7 108 65.7
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 1.1e-35 153.3 108 65.7
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 2.4e-35 152.1 108 64.8
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 3.2e-35 151.8 108 65.7
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 4.2e-35 151.4 105 66.7
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 5.4e-35 151.0 108 64.8
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 7.1e-35 150.6 121 62.8
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 4.8e-31 137.9 93 74.2
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 5.8e-29 131.0 108 66.7
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.9e-29 130.2 109 58.7
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.7e-28 129.4 109 58.7
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.1e-27 126.7 109 54.1
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.1e-27 126.7 109 54.1
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 4.2e-27 124.8 86 70.9
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 5.5e-27 124.4 74 79.7
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 2.1e-26 122.5 108 60.2
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 1.3e-25 119.8 107 52.3
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 8.7e-25 117.1 100 55.0
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 1.3e-23 113.2 107 49.5
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 6.2e-23 110.9 103 51.5
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 5.8e-21 104.4 109 45.9
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 1.0e-20 103.6 104 50.0
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 1.3e-20 103.2 66 72.7
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 8.4e-20 100.5 65 80.0
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 3.5e-18 95.1 65 72.3
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 1.9e-16 89.4 65 69.2
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 5.7e-16 87.8 65 63.1
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 4.8e-15 84.7 69 59.4
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 2.7e-10 68.9 117 32.5
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 9.7e-08 60.5 37 67.6
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 1.8e-06 56.2 38 63.2


User provided reference genes

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