Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju1319C0T4 Lonicera japonica HOM05D028833 ORTHO05D012833 9.2e-265 916.4 476 100.0
Lju1319C1T3 Lonicera japonica HOM05D028833 ORTHO05D012833 5.2e-143 511.9 445 59.6
Lj1P363T7 Lonicera japonica HOM05D028833 ORTHO05D012833 4.0e-103 379.4 213 97.2
Lju1319C1T1 Lonicera japonica HOM05D028833 ORTHO05D012833 8.2e-64 248.8 166 71.1
Lj2P199T12 Lonicera japonica HOM05D021051 ORTHO05D012833 1.6e-19 101.7 219 32.9
CSS0032867 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 5.2e-18 96.7 383 25.6
CSS0044023 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 2.2e-16 91.3 262 27.1
CSS0003503 Camellia sinensis var. sinensis HOM05D013671 ORTHO05D012833 2.9e-16 90.9 262 27.5
Rhsim08G0029000 Rhododendron simsii HOM05D013671 ORTHO05D012833 3.5e-14 84.0 219 29.7
Dinv40328 Davidia involucrata HOM05D013671 ORTHO05D012833 2.5e-12 77.8 389 23.9
Lj2P199T8 Lonicera japonica HOM05D021051 ORTHO05D012833 6.8e-10 69.7 124 36.3
Lj2P186T14 Lonicera japonica HOM05D021051 ORTHO05D012833 1.5e-09 68.6 96 40.6
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 4.1e-07 60.5 175 28.6
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 7.1e-07 59.7 325 21.5
Rhsim06G0096900 Rhododendron simsii HOM05D013671 ORTHO05D012833 7.1e-07 59.7 74 39.2
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.6e-06 58.5 164 27.4
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 3.5e-06 57.4 135 33.3
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 3.5e-06 57.4 142 29.6
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 3.5e-06 57.4 228 25.0
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.0e-06 56.6 262 22.9
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 7.8e-06 56.2 162 29.6


User provided reference genes

Program Settings