Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 8.7e-307 1056.2 558 100.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 6.1e-236 820.8 576 78.1
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 2.9e-225 785.4 577 75.2
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.7e-222 776.2 570 73.7
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 8.1e-220 767.3 571 74.3
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.3e-217 760.0 569 72.1
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.9e-216 756.1 576 72.4
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.3e-214 750.0 575 72.2
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 6.6e-214 747.7 567 70.9
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 8.6e-214 747.3 567 72.0
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 9.5e-213 743.8 563 72.8
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 2.1e-212 742.7 599 69.3
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 8.1e-212 740.7 561 71.3
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 8.1e-212 740.7 572 71.0
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.2e-210 736.9 566 70.0
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 7.6e-210 734.2 566 72.6
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 7.6e-210 734.2 590 67.8
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 4.9e-209 731.5 563 70.3
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.9e-208 729.6 564 71.6
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 7.1e-208 727.6 562 69.9
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.2e-207 726.9 564 72.0
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 2.7e-207 725.7 563 69.1
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.0e-207 724.5 564 71.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 8.7e-206 720.7 564 71.5
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 8.7e-206 720.7 576 69.6
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.5e-205 719.9 576 69.6
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.9e-205 719.5 569 68.9
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 3.3e-205 718.8 563 70.2
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 3.3e-205 718.8 577 70.5
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.6e-205 718.0 564 71.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.6e-204 715.3 579 69.9
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 6.2e-204 714.5 582 68.4
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 8.1e-204 714.1 560 68.2
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 3.1e-203 712.2 572 69.8
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 4.0e-203 711.8 572 69.1
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 4.0e-203 711.8 575 68.5
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 5.3e-203 711.4 563 68.4
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 6.9e-203 711.1 570 68.4
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 6.9e-203 711.1 571 68.5
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.2e-202 710.3 572 68.2
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.5e-202 709.9 576 68.8
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 2.2e-201 706.1 574 67.8
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 4.9e-201 704.9 563 68.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 6.4e-201 704.5 557 68.8
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 6.4e-201 704.5 565 68.8
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.4e-200 703.4 573 68.4
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.9e-200 703.0 573 66.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 3.2e-200 702.2 574 65.5
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 3.2e-200 702.2 567 69.1
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 3.2e-200 702.2 576 68.4
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.5e-199 698.7 564 70.2
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 6.0e-199 698.0 574 68.1
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.7e-198 696.4 569 66.8
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 2.3e-198 696.0 578 66.6
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 6.6e-198 694.5 563 66.8
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.5e-197 693.3 574 67.1
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 2.5e-197 692.6 570 66.8
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 5.6e-197 691.4 634 61.8
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.8e-196 689.1 570 68.6
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 4.8e-196 688.3 570 66.5
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.1e-195 687.2 584 65.8
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 9.0e-195 684.1 558 67.7
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.5e-194 683.3 569 65.6
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.5e-194 683.3 572 66.8
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 2.0e-194 682.9 561 66.1
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 4.5e-194 681.8 558 65.9
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 5.8e-194 681.4 566 66.1
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.4e-192 676.8 563 64.8
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 4.2e-192 675.2 577 65.3
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 4.2e-192 675.2 564 65.6
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.6e-191 673.3 562 65.3
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.6e-191 673.3 573 65.4
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.3e-190 670.2 569 64.9
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 6.7e-190 667.9 562 64.6
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 6.7e-190 667.9 569 65.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 2.5e-189 666.0 533 70.9
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 3.3e-189 665.6 559 65.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 7.4e-189 664.5 562 64.2
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 9.6e-189 664.1 569 64.7
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 7.6e-186 654.4 528 66.9
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.8e-185 652.1 575 63.0
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.9e-181 639.8 562 63.2
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.9e-181 639.8 562 63.2
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.5e-181 639.4 486 71.6
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 5.7e-181 638.3 562 63.0
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.4e-179 633.6 562 62.5
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.4e-179 633.6 562 62.5
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 3.1e-179 632.5 561 64.7
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.1e-173 614.0 575 61.2
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 4.1e-171 605.5 570 58.9
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 2.0e-170 603.2 511 64.2
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.5e-168 596.3 568 58.6
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 7.2e-168 594.7 576 56.9
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.0e-162 576.6 638 52.7
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 4.8e-156 555.4 508 60.4
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 5.7e-133 478.8 403 64.0
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 6.6e-121 438.7 453 57.2
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.1e-120 438.0 573 43.8
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.0e-113 414.8 550 44.5
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.6e-109 400.2 401 60.1
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.2e-103 381.3 599 40.2
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.0e-97 360.1 298 68.5
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.1e-96 358.2 225 79.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.9e-96 357.5 236 79.2
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 6.2e-95 352.4 548 40.3
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 5.2e-94 349.4 599 38.2
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 9.3e-83 312.0 303 64.0
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 2.6e-77 293.9 269 58.7
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 5.8e-77 292.7 250 69.6
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.9e-72 277.7 369 50.9
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 3.8e-68 263.5 174 71.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 4.6e-58 229.9 154 77.9
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.1e-50 204.5 190 63.2
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 6.7e-49 199.5 588 29.9
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.0e-41 174.1 150 62.7
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.9e-35 154.8 157 63.7
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.8e-23 113.6 71 71.8
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.3e-15 89.0 54 88.9
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 5.2e-09 67.0 47 74.5
RcHm_v2.0_Chr3g0480231 Rosa chinensis HOM05D006621 ORTHO05D043305 1.4e-06 58.9 41 80.5


User provided reference genes

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