Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju114P6T7 Lonicera japonica HOM05D000007 ORTHO05D000039 2.6e-61 238.4 111 100.0
Lju1609P2T20 Lonicera japonica HOM05D000007 ORTHO05D000039 8.7e-33 143.7 92 75.0
Lj1P655T32 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-31 139.0 95 67.4
Lj1C655T5 Lonicera japonica HOM05D000007 ORTHO05D000039 2.4e-30 135.6 95 66.3
Lju1220A4G22 Lonicera japonica HOM05D000007 ORTHO05D000039 1.8e-25 119.4 95 63.2
Lj1P660T10 Lonicera japonica HOM05D000007 ORTHO05D000039 8.2e-23 110.5 82 61.0
Lj1A662G33 Lonicera japonica HOM05D000007 ORTHO05D000039 3.4e-21 105.1 96 55.2
Lj1P660T24 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-20 102.1 96 54.2
Lj1C663T1 Lonicera japonica HOM05D000007 ORTHO05D000039 3.8e-20 101.7 91 54.9
Lj1C671T7 Lonicera japonica HOM05D000007 ORTHO05D000039 4.2e-19 98.2 91 53.8
Lj1P662T13 Lonicera japonica HOM05D000007 ORTHO05D000039 5.5e-19 97.8 93 53.8
Lj1A671T54 Lonicera japonica HOM05D000007 ORTHO05D000039 3.5e-18 95.1 94 54.3
Lj1C674T7 Lonicera japonica HOM05D000007 ORTHO05D000039 3.5e-18 95.1 91 53.8
Lj1C664T13 Lonicera japonica HOM05D000007 ORTHO05D000039 6.0e-18 94.4 96 46.9
Lj1P664T31 Lonicera japonica HOM05D000007 ORTHO05D000039 6.0e-18 94.4 95 52.6
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 3.0e-17 92.0 92 52.2
Lj1P591T21 Lonicera japonica HOM05D000007 ORTHO05D000039 3.0e-17 92.0 88 47.7
Lj1A530T29 Lonicera japonica HOM05D000007 ORTHO05D000039 3.9e-17 91.7 93 49.5
Lj1C674T3 Lonicera japonica HOM05D000007 ORTHO05D000039 6.7e-17 90.9 97 49.5
Lj1C674T2 Lonicera japonica HOM05D000007 ORTHO05D000039 8.7e-17 90.5 92 50.0
Lj1A671T53 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-15 86.3 78 53.8
Lj1P529T7 Lonicera japonica HOM05D000007 ORTHO05D000039 2.8e-15 85.5 96 47.9
Lj1P673T22 Lonicera japonica HOM05D000007 ORTHO05D000039 4.8e-15 84.7 94 48.9
Lj1P670T24 Lonicera japonica HOM05D000007 ORTHO05D000039 8.2e-15 84.0 94 47.9
Lju225C2G11 Lonicera japonica HOM05D000007 ORTHO05D000039 8.2e-15 84.0 52 76.9
Dinv12703 Davidia involucrata HOM05D000007 ORTHO05D000039 3.1e-14 82.0 91 45.1
Lj1A656G15 Lonicera japonica HOM05D000007 ORTHO05D000039 3.1e-14 82.0 114 40.4
Haze_13292 Corylus avellana HOM05D000007 ORTHO05D000039 9.0e-14 80.5 93 45.2
Haze_13542 Corylus avellana HOM05D000007 ORTHO05D000039 1.2e-13 80.1 94 41.5
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 1.5e-13 79.7 93 48.4
Lj1P664T40 Lonicera japonica HOM05D000007 ORTHO05D000039 2.0e-13 79.3 98 44.9
Lj1P670T34 Lonicera japonica HOM05D000007 ORTHO05D000039 2.6e-13 79.0 96 43.8
Lj2C804T8 Lonicera japonica HOM05D000007 ORTHO05D000039 5.9e-13 77.8 92 42.4
Lj8C445T0 Lonicera japonica HOM05D000007 ORTHO05D000039 7.6e-13 77.4 90 44.4
Lj1P673T32 Lonicera japonica HOM05D000007 ORTHO05D000039 1.3e-12 76.6 96 42.7
DCAR_019197 Daucus carota HOM05D000007 ORTHO05D000039 1.7e-12 76.3 93 44.1
Lj2C804T5 Lonicera japonica HOM05D000007 ORTHO05D000039 3.8e-12 75.1 91 40.7
Lju1220C4T12 Lonicera japonica HOM05D000007 ORTHO05D000039 3.8e-12 75.1 98 39.8
Lju225C0T9 Lonicera japonica HOM05D000007 ORTHO05D000039 5.0e-12 74.7 96 40.6
Haze_13541 Corylus avellana HOM05D000007 ORTHO05D000039 6.5e-12 74.3 95 40.0
Lj1P665T26 Lonicera japonica HOM05D000007 ORTHO05D000039 8.5e-12 73.9 97 43.3
Lj5P299T4 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-11 73.6 92 43.5
Lju114C7G11 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-11 73.6 95 41.1
Haze_13293 Corylus avellana HOM05D000007 ORTHO05D000039 1.4e-11 73.2 95 38.9
Lj1P665T33 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-11 73.2 91 42.9
Lju1074C2T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-11 73.2 96 42.7
Lju225C3T2 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-11 73.2 96 38.5
Haze_13248 Corylus avellana HOM05D000029 ORTHO05D001395 1.9e-11 72.8 89 43.8
Actinidia11195 Actinidia chinensis HOM05D000007 ORTHO05D000039 4.2e-11 71.6 86 40.7
Dinv41267 Davidia involucrata HOM05D000007 ORTHO05D000039 4.2e-11 71.6 89 42.7
Nitab4.5_0003693g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.5e-11 71.2 93 39.8
Lj1P593T21 Lonicera japonica HOM05D000007 ORTHO05D000039 9.4e-11 70.5 95 38.9
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.2e-10 70.1 93 38.7
vmacro20453 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 2.7e-10 68.9 91 36.3
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 3.6e-10 68.6 91 40.7
Haze_13295 Corylus avellana HOM05D000007 ORTHO05D000039 4.6e-10 68.2 91 40.7
Lj5P703T14 Lonicera japonica HOM05D058646 ORTHO05D000039 4.6e-10 68.2 71 50.7
Peaxi162Scf00038g00024 Petunia axillaris HOM05D000007 ORTHO05D000039 4.6e-10 68.2 90 40.0
Potri.001G262900 Populus trichocarpa HOM05D000007 ORTHO05D000039 4.6e-10 68.2 95 40.0
Lju114C6T5 Lonicera japonica HOM05D000007 ORTHO05D000039 6.1e-10 67.8 71 46.5
Lju1609C1G1 Lonicera japonica HOM05D000007 ORTHO05D000039 6.1e-10 67.8 70 50.0
QL08p040501 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-10 67.8 106 36.8
Haze_13252 Corylus avellana HOM05D000007 ORTHO05D000039 1.0e-09 67.0 94 37.2
Hma1.2p1_0036F.1_g023670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.0e-09 67.0 88 39.8
Hma1.2p1_0036F.1_g023680 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.0e-09 67.0 89 39.3
Lj5P288T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-09 67.0 92 41.3
EL10Ac8g20101 Beta vulgaris HOM05D000007 ORTHO05D000039 1.4e-09 66.6 111 37.8
Oeu011073.1 Olea europaea HOM05D000007 ORTHO05D000039 1.4e-09 66.6 98 35.7
Peaxi162Scf00469g00073 Petunia axillaris HOM05D000007 ORTHO05D000039 1.4e-09 66.6 87 40.2
QL08p040430 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-09 66.2 106 39.6
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 2.3e-09 65.9 106 33.0
CSS0017530 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 2.3e-09 65.9 89 38.2
Haze_13298 Corylus avellana HOM05D000007 ORTHO05D000039 3.0e-09 65.5 93 39.8
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-09 65.5 103 37.9
Nitab4.5_0003693g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.0e-09 65.5 94 36.2
Peaxi162Scf00469g00087 Petunia axillaris HOM05D000007 ORTHO05D000039 3.0e-09 65.5 90 38.9
Cpa.g.sc791.2 Carica papaya HOM05D000007 ORTHO05D000039 3.9e-09 65.1 104 33.7
Haze_15767 Corylus avellana HOM05D000007 ORTHO05D000039 3.9e-09 65.1 94 41.5
Nitab4.5_0003693g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.9e-09 65.1 104 33.7
Nitab4.5_0003693g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.9e-09 65.1 95 34.7
Sopen07g027210 Solanum pennellii HOM05D000007 ORTHO05D000039 3.9e-09 65.1 92 37.0
Actinidia03637 Actinidia chinensis HOM05D000007 ORTHO05D000039 5.1e-09 64.7 87 39.1
Nitab4.5_0003693g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.1e-09 64.7 93 36.6
Prupe.3G110400 Prunus persica HOM05D000007 ORTHO05D000039 5.1e-09 64.7 88 37.5
Lju1220C5T1 Lonicera japonica HOM05D000007 ORTHO05D000039 6.7e-09 64.3 69 44.9
Peaxi162Scf00469g00823 Petunia axillaris HOM05D000007 ORTHO05D000039 8.8e-09 63.9 90 36.7
Haze_13250 Corylus avellana HOM05D000007 ORTHO05D000039 1.1e-08 63.5 89 40.4
Haze_13301 Corylus avellana HOM05D000007 ORTHO05D000039 1.5e-08 63.2 93 40.9
Prupe.3G110600 Prunus persica HOM05D000007 ORTHO05D000039 1.5e-08 63.2 88 37.5
Haze_13253 Corylus avellana HOM05D000007 ORTHO05D000039 1.9e-08 62.8 82 39.0
CAN.G464.45 Capsicum annuum HOM05D000007 ORTHO05D000039 3.3e-08 62.0 97 29.9
Hma1.2p1_0036F.1_g023650 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 3.3e-08 62.0 88 39.8
Eucgr.C02180 Eucalyptus grandis HOM05D000007 ORTHO05D000039 4.3e-08 61.6 98 33.7
Lj1P794T16 Lonicera japonica HOM05D000007 ORTHO05D000039 4.3e-08 61.6 92 35.9
Oeu028657.1 Olea europaea HOM05D000007 ORTHO05D000039 5.7e-08 61.2 85 35.3
Hma1.2p1_1797F.1_g302840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 7.4e-08 60.8 91 36.3
Nitab4.5_0009868g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.4e-08 60.8 91 34.1
PGSC0003DMG402020445 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.4e-08 60.8 95 35.8
SGA_v2.0_scaffold9G04860 Striga asiatica HOM05D000007 ORTHO05D000039 7.4e-08 60.8 87 34.5
Dinv42745 Davidia involucrata HOM05D000007 ORTHO05D000039 9.7e-08 60.5 94 33.0
Dinv43356 Davidia involucrata HOM05D000007 ORTHO05D000039 9.7e-08 60.5 94 33.0
Dinv19778 Davidia involucrata HOM05D000007 ORTHO05D000039 1.3e-07 60.1 91 37.4
Migut.H02131 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.3e-07 60.1 96 36.5
PSO832G2738 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-07 60.1 93 31.2
Sed0011449 Sechium edule HOM05D000007 ORTHO05D000039 1.3e-07 60.1 93 33.3
Haze_10195 Corylus avellana HOM05D000007 ORTHO05D000039 1.7e-07 59.7 97 39.2
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-07 59.7 95 33.7
TWI32G0895 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.7e-07 59.7 97 35.1
CAN.G456.11 Capsicum annuum HOM05D000007 ORTHO05D000039 2.2e-07 59.3 92 35.9
Dinv05355 Davidia involucrata HOM05D000007 ORTHO05D000039 2.2e-07 59.3 104 35.6
Dinv24453 Davidia involucrata HOM05D000007 ORTHO05D000039 2.2e-07 59.3 90 31.1
MSTRG.15075 Avicennia marina HOM05D000007 ORTHO05D000039 2.8e-07 58.9 87 33.3
Lj1P592T13 Lonicera japonica HOM05D000007 ORTHO05D000039 2.8e-07 58.9 88 35.2
Nitab4.5_0018863g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.8e-07 58.9 91 35.2
Oeu032135.1 Olea europaea HOM05D000007 ORTHO05D000039 2.8e-07 58.9 87 34.5
QL08p040393 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-07 58.9 94 37.2
Nitab4.5_0000249g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.7e-07 58.5 91 34.1
SalBow7G4098 Salvia bowleyana HOM05D000007 ORTHO05D000039 3.7e-07 58.5 96 32.3
Solyc07g055020.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.7e-07 58.5 98 33.7
PGSC0003DMG400020424 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.7e-07 58.5 92 34.8
Dinv24454 Davidia involucrata HOM05D000007 ORTHO05D000039 4.8e-07 58.2 85 32.9
QL08p040425 Quercus lobata HOM05D000007 ORTHO05D000039 4.8e-07 58.2 85 37.6
Solyc10g008580.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 4.8e-07 58.2 92 31.5
Lj8P116T38 Lonicera japonica HOM05D000007 ORTHO05D000039 6.3e-07 57.8 94 34.0
Sopen07g027190 Solanum pennellii HOM05D000007 ORTHO05D000039 6.3e-07 57.8 95 32.6
PGSC0003DMG402021671 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.3e-07 57.8 92 31.5
Lj1P652T23 Lonicera japonica HOM05D000007 ORTHO05D000039 8.2e-07 57.4 91 37.4
PSO478G3792 Papaver somniferum HOM05D000007 ORTHO05D000017 8.2e-07 57.4 97 32.0
Sopen10g004400 Solanum pennellii HOM05D000007 ORTHO05D000039 8.2e-07 57.4 92 32.6
CiPaw.03G182200 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.1e-06 57.0 97 30.9
Cc05_g06410 Coffea canephora HOM05D000007 ORTHO05D000039 1.1e-06 57.0 94 35.1
QL04p018852 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-06 57.0 98 34.7
vmacro12403 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.1e-06 57.0 99 34.3
Nitab4.5_0002027g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.4e-06 56.6 87 33.3
Nitab4.5_0004937g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.4e-06 56.6 87 32.2
QL11p003050 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-06 56.6 89 34.8
TWI31G0102 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.4e-06 56.6 95 34.7
Haze_05766 Corylus avellana HOM05D000007 ORTHO05D000039 1.8e-06 56.2 96 38.5
MELO3C014363.2 Cucumis melo HOM05D000007 ORTHO05D000039 1.8e-06 56.2 91 30.8
CsaV3_6G037490 Cucumis sativus L. HOM05D000007 ORTHO05D000039 1.8e-06 56.2 91 30.8
Hma1.2p1_0901F.1_g234670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.8e-06 56.2 86 34.9
Hma1.2p1_0901F.1_g234685 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.8e-06 56.2 86 34.9
Hma1.2p1_1150F.1_g261840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.8e-06 56.2 86 34.9
HanXRQChr17g0538721 Helianthus annuus HOM05D000007 ORTHO05D000017 2.4e-06 55.8 87 34.5
QL11p003899 Quercus lobata HOM05D000007 ORTHO05D000039 2.4e-06 55.8 105 29.5
vmacro13637 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 2.4e-06 55.8 103 30.1
Ciclev10028237m.g Citrus clementina HOM05D000007 ORTHO05D000039 3.1e-06 55.5 91 31.9
Peaxi162Scf00776g00029 Petunia axillaris HOM05D000007 ORTHO05D000521 3.1e-06 55.5 81 35.8
QL04p019108 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-06 55.5 95 36.8
RcHm_v2.0_Chr5g0070761 Rosa chinensis HOM05D000007 ORTHO05D000039 3.1e-06 55.5 81 35.8
vmacro06021 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 3.1e-06 55.5 87 37.9
Nitab4.5_0000990g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.1e-06 55.1 97 35.1
PSO675G2942 Papaver somniferum HOM05D000007 ORTHO05D000017 4.1e-06 55.1 74 36.5
CAN.G456.10 Capsicum annuum HOM05D000007 ORTHO05D000039 5.3e-06 54.7 92 34.8
Haze_10234 Corylus avellana HOM05D000007 ORTHO05D000039 5.3e-06 54.7 88 36.4
Haze_12846 Corylus avellana HOM05D000007 ORTHO05D000039 5.3e-06 54.7 68 41.2
FAN04G2450 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.3e-06 54.7 107 30.8
Nitab4.5_0000635g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.3e-06 54.7 90 32.2
Nitab4.5_0001774g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 5.3e-06 54.7 81 35.8
Nitab4.5_0005902g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.3e-06 54.7 95 35.8
QL08p040450 Quercus lobata HOM05D000007 ORTHO05D000039 5.3e-06 54.7 106 31.1
Solyc01g055160.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 5.3e-06 54.7 91 36.3
vmacro12404 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 5.3e-06 54.7 91 35.2
Nitab4.5_0007022g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.9e-06 54.3 87 32.2
Peaxi162Scf00608g00048 Petunia axillaris HOM05D000007 ORTHO05D000039 6.9e-06 54.3 93 34.4
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 9.1e-06 53.9 90 35.6
Haze_20339 Corylus avellana HOM05D000007 ORTHO05D000039 9.1e-06 53.9 103 34.0
FvH4_5g33960 Fragaria vesca HOM05D000007 ORTHO05D000039 9.1e-06 53.9 92 32.6
FAN04G2331 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.1e-06 53.9 92 32.6
FAN08G3168 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.1e-06 53.9 92 32.6
FAN18G4160 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.1e-06 53.9 92 32.6
Peaxi162Scf00384g00125 Petunia axillaris HOM05D000007 ORTHO05D000039 9.1e-06 53.9 95 36.8
QL11p003889 Quercus lobata HOM05D000007 ORTHO05D000039 9.1e-06 53.9 88 34.1
TAR626G0319 Trochodendron aralioides HOM05D000007 ORTHO05D000017 9.1e-06 53.9 89 36.0


User provided reference genes

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