Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 7.0e-237 823.5 414 100.0
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-196 689.1 413 86.7
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 5.2e-99 365.5 355 53.8
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 3.8e-57 226.5 387 35.7
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 4.6e-55 219.5 359 38.4
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 3.9e-46 189.9 346 34.4
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-44 184.1 382 31.4
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 3.7e-44 183.3 379 32.7
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-43 181.4 379 32.5
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-43 180.6 303 35.0
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-43 180.6 378 32.3
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 9.1e-43 178.7 393 33.3
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 4.5e-42 176.4 378 31.7
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 6.5e-41 172.6 265 35.5
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 5.2e-38 162.9 201 42.8
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-37 161.8 241 37.8
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-36 157.9 358 31.6
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-35 154.8 217 42.9
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 9.1e-35 152.1 362 28.5
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 3.5e-34 150.2 218 39.4
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-32 145.2 162 43.2
Lj3g0003280 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-31 141.0 304 31.9
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 6.1e-31 139.4 296 31.4
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-30 138.3 338 31.1
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 6.8e-30 136.0 325 30.5
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 8.8e-30 135.6 324 29.3
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-29 135.2 271 33.2
Lj5g0006780 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-27 127.9 201 37.3
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-27 127.5 224 32.6
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 3.1e-27 127.1 304 31.6
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-26 125.2 331 27.5
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-26 124.4 222 36.0
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-24 117.1 344 27.0
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 5.2e-22 109.8 298 24.8
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 6.8e-22 109.4 298 25.5
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-21 107.8 298 28.2
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-21 107.5 370 25.1
Lj2g0013073 Lotus japonicus HOM05D008220 ORTHO05D010358 3.4e-21 107.1 212 34.0
Lj1g0012808 Lotus japonicus HOM05D008220 ORTHO05D010358 5.7e-21 106.3 206 37.9
Lj2g0023598 Lotus japonicus HOM05D008220 ORTHO05D010358 3.5e-18 97.1 181 35.4
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-17 95.5 197 34.5
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 2.3e-17 94.4 240 30.0
Lj1g0021549 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-16 92.0 190 33.2
Lj3g0028205 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-16 92.0 183 35.0
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 5.6e-16 89.7 205 30.2
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.6e-15 87.0 342 24.0
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-14 85.1 305 27.5
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 3.0e-14 84.0 187 32.1
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.2e-14 83.2 307 24.1
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-13 80.9 167 27.5
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.2e-12 77.8 331 22.7
Lj4g0004153 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-12 77.4 179 26.3
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 6.4e-12 76.3 301 24.3
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.2e-11 73.9 235 24.3
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.0e-11 72.8 338 21.3
Lsat_1_v5_gn_5_131521 Lactuca sativa HOM05D003915 ORTHO05D001516 9.2e-11 72.4 374 25.7
LjContig00272g0003214 Lotus japonicus HOM05D019244 ORTHO05D036501 9.2e-11 72.4 128 34.4
Ah.13g066110 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.2e-10 72.0 333 18.6
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 1.6e-10 71.6 358 22.3
Lj4g0019865 Lotus japonicus HOM05D019244 ORTHO05D036501 1.6e-10 71.6 121 33.1
Lj6g0008950 Lotus japonicus HOM05D019244 ORTHO05D036501 2.0e-10 71.2 105 40.0
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 3.5e-10 70.5 117 30.8
Lj5g0026451 Lotus japonicus HOM05D008220 ORTHO05D010358 5.9e-10 69.7 392 21.2
Lj6g0007004 Lotus japonicus HOM05D019244 ORTHO05D010358 5.9e-10 69.7 124 35.5
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.3e-09 68.6 417 22.5
Psat3g118120 Pisum sativum HOM05D007807 ORTHO05D001516 1.7e-09 68.2 377 19.6
Glyma.16G096100 Glycine max HOM05D002777 ORTHO05D001516 3.0e-09 67.4 321 23.1
LjContig00357g0023212 Lotus japonicus HOM05D002777 ORTHO05D001516 3.0e-09 67.4 393 19.3
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-08 65.5 397 20.2
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.5e-08 65.1 391 22.8
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.9e-08 64.7 297 23.6
Thecc.07G067600 Theobroma cacao HOM05D023671 ORTHO05D001516 1.9e-08 64.7 109 34.9
Lj6g0024174 Lotus japonicus HOM05D002777 ORTHO05D001516 2.5e-08 64.3 345 22.6
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 4.3e-08 63.5 389 21.9
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 5.6e-08 63.2 210 26.7
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.6e-08 63.2 284 21.1
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.6e-08 63.2 270 22.6
Psat0s287g0120 Pisum sativum HOM05D007807 ORTHO05D001516 9.5e-08 62.4 113 29.2
ECA248G0911 Erigeron canadensis HOM05D000003 ORTHO05D011516 1.2e-07 62.0 351 20.2
MBI08_g05234_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.6e-07 61.6 340 22.1
Psat0s1204g0040 Pisum sativum HOM05D007807 ORTHO05D001516 1.6e-07 61.6 183 23.5
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 1.6e-07 61.6 170 27.1
Lj6g0023930 Lotus japonicus HOM05D002777 ORTHO05D001516 2.1e-07 61.2 119 26.9
Psat5g175040 Pisum sativum HOM05D007807 ORTHO05D001516 2.8e-07 60.8 183 24.0
Lj6g0001789 Lotus japonicus HOM05D019244 ORTHO05D010358 3.6e-07 60.5 77 35.1
Ah.07g201540 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.7e-07 60.1 88 33.0
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 6.2e-07 59.7 212 25.0
Sc03g0005750 Simmondsia chinensis HOM05D009348 ORTHO05D011705 6.2e-07 59.7 136 30.1
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.0e-07 59.3 78 38.5
Glyma.09G182900 Glycine max HOM05D002777 ORTHO05D001516 8.0e-07 59.3 336 23.5
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.0e-07 59.3 397 19.6
Lj2g0000729 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-06 58.9 152 24.3
Lj3g0019514 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-06 58.5 152 21.7
Lj6g0026012 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-06 58.5 65 40.0
Psat7g033120 Pisum sativum HOM05D007807 ORTHO05D001516 1.4e-06 58.5 169 24.9
Psat5g029760 Pisum sativum HOM05D007807 ORTHO05D001516 1.8e-06 58.2 183 24.0
Psat5g231960 Pisum sativum HOM05D007807 ORTHO05D001516 1.8e-06 58.2 183 24.6
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 2.3e-06 57.8 247 23.5
Lj2g0021049 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-06 57.8 220 24.5
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-06 57.8 330 22.1
Psat0s3204g0040 Pisum sativum HOM05D007807 ORTHO05D000006 2.3e-06 57.8 187 23.5
Psat5g142480 Pisum sativum HOM05D007807 ORTHO05D001516 2.3e-06 57.8 244 24.6
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.1e-06 57.4 78 41.0
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 3.1e-06 57.4 95 34.7
Psat0s1058g0320 Pisum sativum HOM05D007807 ORTHO05D001516 3.1e-06 57.4 185 24.9
Psat0ss2562g0120 Pisum sativum HOM05D007807 ORTHO05D001516 3.1e-06 57.4 169 24.9
Psat5g137320 Pisum sativum HOM05D007807 ORTHO05D001516 3.1e-06 57.4 185 24.9
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.0e-06 57.0 78 35.9
COL.COLO4_14854 Corchorus olitorius HOM05D001197 ORTHO05D000124 4.0e-06 57.0 83 42.2
Lsat_1_v5_gn_2_125141 Lactuca sativa HOM05D008939 ORTHO05D001516 4.0e-06 57.0 326 23.0
Lj1g0022989 Lotus japonicus HOM05D008220 ORTHO05D010358 4.0e-06 57.0 129 33.3
COL.COLO4_08755 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.2e-06 56.6 291 23.4
Ah.05g174560 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.8e-06 56.2 133 27.1
Ah.10g026880 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.8e-06 56.2 70 35.7
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.8e-06 56.2 316 21.5
PRCOL_00001695 Prasinoderma coloniale HOM05D001413 ORTHO05D001385 8.9e-06 55.8 116 31.0
Thecc.08G019000 Theobroma cacao HOM05D023671 ORTHO05D000006 8.9e-06 55.8 257 24.5


User provided reference genes

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