Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 2.1e-274 948.3 460 100.0
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.9e-219 765.8 465 79.4
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 4.8e-218 761.1 464 78.9
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 9.0e-217 756.9 463 78.8
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 2.0e-216 755.7 453 80.1
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 4.5e-216 754.6 466 77.3
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 5.6e-211 737.6 465 75.3
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 7.4e-211 737.3 451 76.7
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 8.1e-210 733.8 433 81.3
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 5.7e-203 711.1 467 74.3
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 8.5e-191 670.6 462 69.7
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.1e-189 666.0 462 69.0
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 2.6e-187 659.1 450 69.3
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 4.1e-185 651.7 450 68.7
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.7e-183 646.4 440 69.3
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 5.5e-182 641.3 449 69.5
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 3.6e-181 638.6 423 70.4
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 1.4e-180 636.7 425 70.6
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 8.8e-180 634.0 437 67.0
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.1e-179 633.6 438 68.9
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.7e-178 629.8 440 69.3
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 2.8e-178 629.0 466 65.7
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 3.7e-178 628.6 426 69.5
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 8.2e-178 627.5 450 65.6
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.4e-177 626.7 421 68.6
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 7.0e-177 624.4 432 69.0
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.6e-176 622.5 423 68.3
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 2.6e-176 622.5 432 69.0
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 3.5e-176 622.1 436 68.1
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.5e-176 622.1 418 68.9
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.5e-176 621.7 452 65.5
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 5.0e-175 618.2 454 65.4
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 6.5e-175 617.8 465 63.7
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 1.5e-174 616.7 432 67.6
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 2.5e-174 615.9 415 70.1
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 9.4e-174 614.0 414 68.1
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.6e-173 613.2 441 65.5
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 3.6e-173 612.1 455 64.4
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 4.0e-172 608.6 452 64.6
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 6.7e-172 607.8 453 65.3
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 8.8e-172 607.4 398 69.6
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.3e-171 605.5 411 67.9
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 7.5e-171 604.4 434 65.2
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 9.1e-169 597.4 486 60.9
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 9.1e-169 597.4 447 63.3
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 1.2e-168 597.0 417 67.6
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.0e-167 594.0 431 66.4
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.6e-165 586.6 389 69.7
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 4.7e-165 585.1 412 65.8
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.4e-164 583.6 423 64.3
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 2.3e-164 582.8 427 64.6
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 2.3e-164 582.8 355 79.7
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 4.0e-164 582.0 412 65.0
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 5.2e-164 581.6 439 62.4
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 6.8e-164 581.3 439 62.6
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.5e-163 580.1 411 65.9
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 1.5e-163 580.1 427 63.7
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.5e-163 580.1 423 64.1
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 2.0e-163 579.7 451 62.1
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 5.7e-163 578.2 427 63.0
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 5.7e-163 578.2 439 62.4
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.3e-162 577.0 457 60.2
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 1.7e-162 576.6 417 65.0
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 3.7e-162 575.5 425 63.1
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 6.3e-162 574.7 411 64.7
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.4e-161 573.5 429 63.4
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.1e-158 563.9 411 63.5
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.5e-158 561.6 452 60.2
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 8.8e-156 554.3 445 60.9
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 2.2e-154 549.7 453 60.3
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-153 547.4 399 65.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.1e-153 547.4 446 60.8
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 1.1e-150 537.3 419 61.8
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.3e-146 523.9 451 58.1
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 4.1e-145 518.8 457 57.8
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.2e-144 517.3 452 57.5
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 8.6e-143 511.1 427 59.3
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 2.8e-141 506.1 420 59.0
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.2e-138 496.5 419 58.5
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 3.7e-138 495.7 412 57.3
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.4e-137 493.8 422 57.1
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 4.1e-137 492.3 398 57.5
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 5.0e-135 485.3 446 53.1
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.4e-132 477.2 313 69.0
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 8.9e-132 474.6 356 65.4
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 5.8e-131 471.9 450 53.8
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 5.8e-131 471.9 329 67.2
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.7e-128 463.0 405 58.3
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.0e-127 459.5 407 58.2
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.9e-123 444.5 412 56.6
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 9.2e-121 438.0 322 64.0
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 4.3e-118 429.1 321 63.2
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 8.1e-117 424.9 438 47.9
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 8.1e-109 398.3 254 82.3
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.2e-96 357.8 225 73.3
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 1.5e-91 340.9 234 66.7
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 1.4e-76 291.2 237 61.2
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 3.9e-71 273.1 197 64.5
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 3.1e-60 236.9 386 36.3
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-55 221.1 130 80.0
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-55 221.1 130 80.0
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 2.9e-50 203.8 180 55.0
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 3.7e-45 186.8 399 32.1
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 2.4e-36 157.5 161 49.7
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.8e-32 144.1 135 52.6
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.4e-28 131.7 172 44.2
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.4e-28 131.7 172 44.2
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 4.6e-27 126.7 70 85.7
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 6.2e-24 116.3 98 54.1
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 7.0e-20 102.8 75 61.3
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 9.2e-20 102.4 63 66.7
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 2.3e-18 97.8 589 21.4
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 3.1e-15 87.4 208 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 3.4e-14 84.0 226 30.1
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.9e-12 78.2 198 28.8
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.0e-10 70.9 75 44.0


User provided reference genes

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