Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 1.8e-37 159.5 128 100.0
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.0e-24 117.1 123 86.2
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 1.7e-24 116.3 134 78.4
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 3.8e-24 115.2 127 57.5
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 1.5e-23 113.2 128 61.7
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.9e-23 112.8 123 65.0
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 2.5e-23 112.5 131 61.8
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 2.5e-23 112.5 128 63.3
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 3.2e-23 112.1 128 63.3
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 4.2e-23 111.7 128 58.6
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 4.2e-23 111.7 135 77.0
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 5.5e-23 111.3 128 75.0
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 7.2e-23 110.9 132 56.1
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 1.2e-22 110.2 129 75.2
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 2.1e-22 109.4 130 53.1
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 2.7e-22 109.0 128 59.4
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 6.1e-22 107.8 130 56.2
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 8.0e-22 107.5 128 53.1
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 8.0e-22 107.5 128 65.6
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 8.0e-22 107.5 130 50.8
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 8.0e-22 107.5 128 65.6
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 1.0e-21 107.1 130 55.4
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 1.0e-21 107.1 128 55.5
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 1.4e-21 106.7 128 50.0
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 1.4e-21 106.7 128 55.5
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.4e-21 106.7 130 50.8
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 1.8e-21 106.3 128 55.5
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 2.3e-21 105.9 128 61.7
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 2.3e-21 105.9 129 57.4
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.0e-21 105.5 130 50.0
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 3.0e-21 105.5 130 50.0
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 4.0e-21 105.1 129 61.2
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 5.2e-21 104.8 128 55.5
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 8.8e-21 104.0 128 57.0
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 8.8e-21 104.0 128 49.2
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 1.1e-20 103.6 128 58.6
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 1.1e-20 103.6 128 61.7
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 1.1e-20 103.6 131 52.7
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 1.1e-20 103.6 131 49.6
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 1.5e-20 103.2 128 59.4
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.5e-20 103.2 126 53.2
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.5e-20 103.2 129 57.4
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 2.0e-20 102.8 128 57.0
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 2.0e-20 102.8 128 52.3
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 2.6e-20 102.4 136 55.9
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 3.3e-20 102.1 131 55.7
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 3.3e-20 102.1 128 54.7
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 3.3e-20 102.1 128 54.7
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 3.3e-20 102.1 128 53.9
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.3e-20 102.1 133 57.9
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 3.3e-20 102.1 128 75.0
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 3.3e-20 102.1 125 52.8
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 3.3e-20 102.1 128 53.1
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 3.3e-20 102.1 128 53.1
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 4.4e-20 101.7 134 78.4
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 5.7e-20 101.3 128 55.5
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 5.7e-20 101.3 128 76.6
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 5.7e-20 101.3 129 64.3
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 5.7e-20 101.3 133 65.4
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 7.4e-20 100.9 132 56.8
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 7.4e-20 100.9 132 53.8
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 7.4e-20 100.9 128 60.9
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 7.4e-20 100.9 128 55.5
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 7.4e-20 100.9 128 54.7
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 7.4e-20 100.9 128 52.3
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 9.7e-20 100.5 128 48.4
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 1.3e-19 100.1 128 53.9
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 1.7e-19 99.8 139 64.0
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 2.2e-19 99.4 125 48.0
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 2.8e-19 99.0 127 51.2
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 3.7e-19 98.6 133 57.9
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 3.7e-19 98.6 126 55.6
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 3.7e-19 98.6 130 75.4
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.8e-19 98.2 125 52.0
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 6.3e-19 97.8 128 55.5
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 6.3e-19 97.8 128 55.5
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 6.3e-19 97.8 130 50.8
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 6.3e-19 97.8 130 76.2
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 6.3e-19 97.8 128 51.6
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 1.1e-18 97.1 128 46.1
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 1.4e-18 96.7 125 47.2
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 9.1e-18 94.0 129 45.7
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 2.0e-17 92.8 128 51.6
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 1.7e-16 89.7 130 55.4
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.9e-15 86.3 55 80.0
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.9e-15 86.3 55 80.0
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 8.0e-14 80.9 119 51.3
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 2.3e-13 79.3 54 72.2
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 6.8e-13 77.8 57 70.2
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 9.8e-12 73.9 46 82.6
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 1.3e-11 73.6 128 39.1
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 2.4e-10 69.3 48 72.9
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 9.1e-10 67.4 57 63.2
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 9.1e-10 67.4 57 63.2
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 1.2e-09 67.0 129 39.5
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.6e-09 66.6 56 62.5
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 6.5e-08 61.2 137 32.1


User provided reference genes

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