Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00439g0013523 Lotus japonicus HOM05D009000 ORTHO05D010659 1.3e-75 286.6 172 100.0
LjContig00315g0010124 Lotus japonicus HOM05D009000 ORTHO05D010659 3.0e-48 195.7 129 77.5
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 5.3e-29 131.7 129 51.9
unitig_87.g27977 Utricularia gibba HOM05D009000 ORTHO05D010659 7.9e-25 117.9 132 47.0
SalBow1G2933 Salvia bowleyana HOM05D009000 ORTHO05D010659 4.5e-20 102.1 119 47.9
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 1.7e-19 100.1 122 41.8
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 6.5e-19 98.2 119 42.9
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 2.5e-18 96.3 123 43.1
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 4.2e-18 95.5 115 41.7
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 7.2e-18 94.7 132 40.9
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 7.2e-18 94.7 123 38.2
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 9.4e-18 94.4 132 40.9
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 6.1e-17 91.7 129 39.5
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 1.0e-16 90.9 126 39.7
HanXRQMTg0579591 Helianthus annuus HOM05D009000 ORTHO05D010659 3.0e-16 89.4 120 45.8
Sopen03g010810 Solanum pennellii HOM05D009000 ORTHO05D010659 3.9e-16 89.0 132 39.4
HanXRQChr13g0388591 Helianthus annuus HOM05D009000 ORTHO05D010659 5.1e-16 88.6 127 40.2
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 3.3e-15 85.9 108 39.8
Sopen11g018250 Solanum pennellii HOM05D015862 ORTHO05D010659 7.4e-15 84.7 121 43.0
Cc00_g01740 Coffea canephora HOM05D009000 ORTHO05D010659 9.7e-15 84.3 123 43.1
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 6.3e-14 81.6 114 38.6
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 6.3e-14 81.6 114 38.6
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 8.2e-14 81.3 114 38.6
Psat7g138400 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-13 80.5 117 37.6
VMungo1309G3000 Vigna mungo HOM05D009000 ORTHO05D010659 7.7e-12 74.7 129 34.9
ECA039G0025 Erigeron canadensis HOM05D000743 ORTHO05D000580 1.3e-11 73.9 131 35.9
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 5.0e-11 72.0 135 35.6
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 5.0e-11 72.0 83 43.4
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 1.9e-10 70.1 128 38.3
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 1.9e-10 70.1 128 38.3
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 1.9e-10 70.1 128 38.3
FAN20G1765 Fragaria x ananassa HOM05D009000 ORTHO05D010659 4.2e-10 68.9 112 38.4
Nitab4.5_0001152g0700 Nicotiana tabacum HOM05D009000 ORTHO05D010659 5.5e-10 68.6 108 38.0
Peaxi162Scf01967g00002 Petunia axillaris HOM05D015862 ORTHO05D010659 2.7e-09 66.2 85 41.2
Peaxi162Scf02507g00003 Petunia axillaris HOM05D015862 ORTHO05D010659 2.7e-09 66.2 85 41.2
unitig_87.g27989 Utricularia gibba HOM05D015862 ORTHO05D010659 3.6e-09 65.9 112 33.0
Glyma.05G092200 Glycine max HOM05D009000 ORTHO05D010659 4.7e-09 65.5 94 39.4
Lsat_1_v5_gn_5_17721 Lactuca sativa HOM05D009000 ORTHO05D010659 6.1e-09 65.1 122 27.9
Manes.09G035001 Manihot esculenta HOM05D015862 ORTHO05D010659 6.1e-09 65.1 96 39.6
Nitab4.5_0000172g0650 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.4e-08 63.9 108 36.1
ECA246G4254 Erigeron canadensis HOM05D001560 ORTHO05D003613 2.3e-08 63.2 135 33.3
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 6.7e-08 61.6 83 37.3
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 8.8e-08 61.2 129 28.7
Solyc12g021320.1 Solanum lycopersicum HOM05D009000 ORTHO05D010659 7.4e-07 58.2 53 47.2
Nitab4.5_0002326g0080 Nicotiana tabacum HOM05D009000 ORTHO05D010659 1.3e-06 57.4 82 39.0
TPR.G35117 Trifolium pratense HOM05D009000 ORTHO05D010659 1.7e-06 57.0 98 37.8
Nitab4.5_0002418g0170 Nicotiana tabacum HOM05D009000 ORTHO05D010659 2.2e-06 56.6 122 32.0
Nitab4.5_0000886g0140 Nicotiana tabacum HOM05D009000 ORTHO05D010659 8.2e-06 54.7 85 38.8
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 8.2e-06 54.7 76 38.2


User provided reference genes

Program Settings