Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00389g0004887 Lotus japonicus HOM05D007701 ORTHO05D006440 5.5e-70 267.7 153 100.0
Phvul.006G160600 Phaseolus vulgaris HOM05D007701 ORTHO05D006440 7.5e-35 151.0 130 67.7
Ca_00580_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 1.1e-33 147.1 135 65.2
Glyma.15G098700 Glycine max HOM05D007701 ORTHO05D006440 1.4e-33 146.7 132 70.5
Glyma.13G214500 Glycine max HOM05D007701 ORTHO05D006440 3.5e-32 142.1 138 67.4
TPR.G1519 Trifolium pratense HOM05D007701 ORTHO05D006440 1.7e-31 139.8 132 59.1
Medtr2g020370 Medicago truncatula HOM05D007701 ORTHO05D006440 3.0e-31 139.0 129 59.7
Lalb_Chr15g0087071 Lupinus albus HOM05D007701 ORTHO05D006440 3.9e-31 138.7 128 66.4
Lalb_Chr20g0118191 Lupinus albus HOM05D007701 ORTHO05D006440 9.8e-27 124.0 128 60.2
Psat1g187000 Pisum sativum HOM05D007701 ORTHO05D006440 1.7e-26 123.2 123 65.0
Cfa015502 Carpinus fangiana HOM05D007701 ORTHO05D006440 6.2e-21 104.8 128 54.7
Haze_01050 Corylus avellana HOM05D007701 ORTHO05D006440 2.6e-19 99.4 118 53.4
CiPaw.01G153900 Carya illinoinensis HOM05D007701 ORTHO05D006440 3.2e-17 92.4 122 54.9
Duzib151G0788 Durio zibethinus HOM05D007701 ORTHO05D006440 9.2e-17 90.9 125 50.4
Sabra10G0031300 Salix brachista HOM05D007701 ORTHO05D006440 1.3e-15 87.0 121 52.1
Potri.008G195700 Populus trichocarpa HOM05D007701 ORTHO05D006440 2.3e-15 86.3 133 48.9
Potri.010G031700 Populus trichocarpa HOM05D007701 ORTHO05D006440 2.3e-15 86.3 113 52.2
Thecc.04G276200 Theobroma cacao HOM05D007701 ORTHO05D006440 6.6e-15 84.7 122 50.8
QL12p038321 Quercus lobata HOM05D007701 ORTHO05D006440 8.6e-15 84.3 128 47.7
Duzib212G0358 Durio zibethinus HOM05D007701 ORTHO05D006440 1.8e-12 76.6 133 45.1
CiPaw.02G087100 Carya illinoinensis HOM05D007701 ORTHO05D006440 5.2e-12 75.1 105 52.4
COL.COLO4_13938 Corchorus olitorius HOM05D007701 ORTHO05D006440 5.2e-12 75.1 127 46.5
Dinv44434 Davidia involucrata HOM05D007701 ORTHO05D006440 1.2e-11 73.9 118 46.6
QL06p007247 Quercus lobata HOM05D007701 ORTHO05D006440 7.6e-11 71.2 118 50.0
Prupe.1G143000 Prunus persica HOM05D016333 ORTHO05D006440 4.9e-10 68.6 130 50.0
Dinv38332 Davidia involucrata HOM05D007701 ORTHO05D006440 8.4e-10 67.8 108 42.6
FvH4_4g17060 Fragaria vesca HOM05D016333 ORTHO05D006440 8.4e-10 67.8 135 48.1
FAN12G2470 Fragaria x ananassa HOM05D016333 ORTHO05D006440 1.1e-09 67.4 131 48.9
Potri.014G135100 Populus trichocarpa HOM05D007701 ORTHO05D006440 5.4e-09 65.1 109 45.0
RcHm_v2.0_Chr4g0420861 Rosa chinensis HOM05D016333 ORTHO05D006440 5.4e-09 65.1 124 48.4
FAN17G0507 Fragaria x ananassa HOM05D016333 ORTHO05D006440 7.1e-09 64.7 122 50.0
TWI09G0131 Tripterygium wilfordii HOM05D007701 ORTHO05D006440 7.1e-09 64.7 108 41.7
FAN12G2150 Fragaria x ananassa HOM05D016333 ORTHO05D006440 9.2e-09 64.3 117 50.4
Sabra08G0148800 Salix brachista HOM05D007701 ORTHO05D006440 9.2e-09 64.3 128 50.0
FAN07G1026 Fragaria x ananassa HOM05D016333 ORTHO05D006440 2.1e-08 63.2 117 49.6
Potri.002G207500 Populus trichocarpa HOM05D007701 ORTHO05D006440 3.5e-08 62.4 107 46.7
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 2.3e-07 59.7 113 42.5
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 3.0e-07 59.3 113 42.5
Oeu021618.1 Olea europaea HOM05D007701 ORTHO05D006440 5.1e-07 58.5 122 41.0
Ciclev10022800m.g Citrus clementina HOM05D007701 ORTHO05D006440 8.6e-07 57.8 126 38.1
Hma1.2p1_0078F.1_g040840 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 8.6e-07 57.8 104 45.2
QL12p024168 Quercus lobata HOM05D007701 ORTHO05D006440 8.6e-07 57.8 113 43.4
Gohir.D08G080500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 1.1e-06 57.4 107 44.9
Manes.03G190500 Manihot esculenta HOM05D007701 ORTHO05D006440 1.5e-06 57.0 119 40.3
Peaxi162Scf00041g01724 Petunia axillaris HOM05D020366 ORTHO05D006440 2.5e-06 56.2 122 38.5
Migut.G00219 Erythranthe guttata HOM05D007701 ORTHO05D006440 5.6e-06 55.1 118 39.8
Lalb_Chr02g0143101 Lupinus albus HOM05D007701 ORTHO05D006440 5.6e-06 55.1 74 47.3
Medtr1g088970 Medicago truncatula HOM05D007701 ORTHO05D006440 5.6e-06 55.1 84 41.7
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 7.3e-06 54.7 135 40.7
ClCG06G005430 Citrullus lanatus HOM05D007701 ORTHO05D006440 9.6e-06 54.3 111 45.9
Thhalv10015003m.g Eutrema salsugineum HOM05D012083 ORTHO05D006440 9.6e-06 54.3 84 50.0
Sopen09g029300 Solanum pennellii HOM05D007701 ORTHO05D006440 9.6e-06 54.3 107 36.4


User provided reference genes

Program Settings