Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 0.0e+00 1384.4 696 100.0
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 6.9e-269 930.6 699 70.5
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-214 750.0 576 70.1
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-169 600.9 674 52.7
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-141 506.9 594 51.7
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 2.7e-92 344.0 646 38.2
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 7.5e-82 309.3 311 54.7
Lj1g0024783 Lotus japonicus HOM05D008220 ORTHO05D010358 1.5e-74 285.0 486 40.3
Lj5g0008704 Lotus japonicus HOM05D008220 ORTHO05D010358 3.7e-73 280.4 377 47.5
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-60 237.3 662 30.7
LjContig00136g0020509 Lotus japonicus HOM05D008220 ORTHO05D010358 1.5e-53 215.3 433 40.0
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 4.6e-47 193.7 290 37.6
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 4.9e-41 173.7 291 35.7
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-40 171.4 503 33.2
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 9.3e-40 169.5 384 33.1
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 9.3e-40 169.5 679 27.2
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-39 168.3 384 33.1
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-35 155.6 686 24.9
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 6.9e-35 153.3 259 36.3
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 1.5e-34 152.1 306 33.0
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 4.9e-33 147.1 393 29.3
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-32 146.0 383 30.0
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-32 144.4 696 23.6
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-32 144.4 393 29.0
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 4.2e-32 144.1 359 30.1
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-30 139.4 358 28.2
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 6.2e-28 130.2 325 30.5
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 9.0e-27 126.3 584 27.2
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-25 121.7 362 29.8
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 6.5e-25 120.2 296 27.4
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-24 117.9 238 34.5
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-23 115.5 280 33.9
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 6.9e-19 100.1 188 28.7
Lj6g0000075 Lotus japonicus HOM05D008220 ORTHO05D010358 5.8e-18 97.1 370 30.3
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 7.6e-18 96.7 297 27.9
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-17 95.5 212 32.5
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-17 95.5 163 30.1
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-17 95.5 277 30.3
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-17 94.7 313 25.6
Lj3g0028205 Lotus japonicus HOM05D008220 ORTHO05D010358 5.0e-17 94.0 497 26.2
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 6.5e-17 93.6 211 32.7
Lj1g0012808 Lotus japonicus HOM05D008220 ORTHO05D010358 4.2e-16 90.9 180 35.0
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 7.2e-16 90.1 315 25.4
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 5.1e-14 84.0 344 24.1
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 6.7e-14 83.6 323 25.7
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 6.7e-14 83.6 306 27.1
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 4.3e-13 80.9 337 23.1
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.7e-13 80.5 365 21.9
Lj5g0006780 Lotus japonicus HOM05D008220 ORTHO05D010358 7.4e-13 80.1 103 41.7
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 9.7e-13 79.7 298 23.2
Lj4g0013222 Lotus japonicus HOM05D002777 ORTHO05D001516 2.8e-12 78.2 333 23.4
Phvul.008G144313 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.8e-12 78.2 300 22.7
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.3e-12 77.0 359 22.6
Lj1g0021549 Lotus japonicus HOM05D008220 ORTHO05D010358 8.2e-12 76.6 141 35.5
Lj4g0004153 Lotus japonicus HOM05D008220 ORTHO05D010358 8.2e-12 76.6 169 30.8
Potri.017G044300 Populus trichocarpa HOM05D002777 ORTHO05D001516 1.1e-11 76.3 290 22.8
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.0e-10 72.0 287 22.3
TPR.G19363 Trifolium pratense HOM05D002777 ORTHO05D001516 2.0e-10 72.0 385 21.6
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-10 71.6 202 28.7
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.4e-10 71.2 282 22.7
Lj5g0026451 Lotus japonicus HOM05D008220 ORTHO05D010358 5.9e-10 70.5 354 24.0
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.0e-09 69.7 78 38.5
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.0e-09 69.7 366 20.8
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-09 69.3 168 26.8
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 2.2e-09 68.6 268 25.7
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 2.2e-09 68.6 202 29.2
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-09 68.6 288 21.5
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-09 68.6 286 21.7
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.9e-09 68.2 278 23.4
Lj6g0026012 Lotus japonicus HOM05D008220 ORTHO05D010358 3.8e-09 67.8 217 26.3
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.0e-09 67.4 109 32.1
Atru.chr3.2350 Acer truncatum HOM05D016018 ORTHO05D017146 1.1e-08 66.2 208 25.5
Lj6g0001789 Lotus japonicus HOM05D019244 ORTHO05D010358 1.9e-08 65.5 77 40.3
Lj6g0007004 Lotus japonicus HOM05D019244 ORTHO05D010358 3.2e-08 64.7 108 37.0
MBI08_g05234_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 4.2e-08 64.3 297 22.9
Phvul.008G120900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.2e-08 64.3 305 22.0
Lj4g0019865 Lotus japonicus HOM05D019244 ORTHO05D036501 1.2e-07 62.8 79 43.0
Ah.05g174560 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.6e-07 62.4 130 29.2
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.6e-07 62.4 82 39.0
COL.COLO4_00259 Corchorus olitorius HOM05D008263 ORTHO05D009583 1.6e-07 62.4 331 20.8
Phvul.004G009401 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.6e-07 62.4 315 23.2
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 1.6e-07 62.4 286 22.7
Ah.14g081710 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.7e-07 61.6 109 33.0
Lj6g0008950 Lotus japonicus HOM05D019244 ORTHO05D036501 2.7e-07 61.6 79 40.5
LjContig00272g0003214 Lotus japonicus HOM05D019244 ORTHO05D036501 2.7e-07 61.6 79 40.5
Psat5g175040 Pisum sativum HOM05D007807 ORTHO05D001516 2.7e-07 61.6 437 22.0
Ah.07g196620 Amaranthus hybridus HOM05D008762 ORTHO05D031041 3.6e-07 61.2 80 40.0
Ah.11g045590 Amaranthus hybridus HOM05D000851 ORTHO05D003960 3.6e-07 61.2 105 34.3
Glyma.20G003900 Glycine max HOM05D002777 ORTHO05D001516 4.6e-07 60.8 314 21.7
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.1e-07 60.5 359 20.3
Lj2g0023598 Lotus japonicus HOM05D008220 ORTHO05D010358 7.9e-07 60.1 166 30.7
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 7.9e-07 60.1 141 30.5
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.9e-07 60.1 280 21.1
Psat7g033120 Pisum sativum HOM05D007807 ORTHO05D001516 7.9e-07 60.1 440 22.0
Ah.06g186480 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.0e-06 59.7 127 28.3
BcaC04g22159 Brassica carinata HOM05D000285 ORTHO05D000241 1.0e-06 59.7 97 35.1
C09p22690 Brassica napus HOM05D000285 ORTHO05D000241 1.0e-06 59.7 97 35.1
Phvul.011G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.0e-06 59.7 321 21.5
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 1.4e-06 59.3 198 25.3
Phvul.006G002800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-06 59.3 314 21.0
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-06 59.3 150 26.7
A09p18240 Brassica napus HOM05D000285 ORTHO05D000241 1.8e-06 58.9 96 34.4
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.8e-06 58.9 83 33.7
Phvul.011G132400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.3e-06 58.5 310 21.6
Ah.13g066110 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.0e-06 58.2 78 33.3
Atru.chr2.3570 Acer truncatum HOM05D016018 ORTHO05D017146 3.9e-06 57.8 151 27.2
Ah.07g201540 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.9e-06 57.8 78 38.5
Phvul.005G103000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.1e-06 57.4 320 21.6
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 6.7e-06 57.0 361 21.6
COL.COLO4_38463 Corchorus olitorius HOM05D008263 ORTHO05D009583 6.7e-06 57.0 317 21.1
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.7e-06 57.0 82 34.1
Atru.chr2.3312 Acer truncatum HOM05D016018 ORTHO05D017146 8.8e-06 56.6 160 28.1
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 8.8e-06 56.6 88 29.5
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 8.8e-06 56.6 165 23.6


User provided reference genes

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