Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00357g0003463 Lotus japonicus HOM05D010487 ORTHO05D011788 2.9e-84 315.8 255 100.0
arahy.Tifrunner.gnm1.ann1.HU7Z0W Arachis hypogaea HOM05D010487 ORTHO05D011788 3.0e-20 103.2 258 36.8
Lalb_Chr10g0105401 Lupinus albus HOM05D010487 ORTHO05D011788 3.0e-20 103.2 281 35.2
arahy.Tifrunner.gnm1.ann1.MU8G5E Arachis hypogaea HOM05D010487 ORTHO05D011788 5.1e-20 102.4 262 37.0
Glyma.14G053800 Glycine max HOM05D010487 ORTHO05D011788 1.3e-18 97.8 262 37.4
Phvul.008G218600 Phaseolus vulgaris HOM05D010487 ORTHO05D011788 1.4e-17 94.4 277 37.2
arahy.Tifrunner.gnm1.ann1.SXB28M Arachis hypogaea HOM05D010487 ORTHO05D011788 4.0e-17 92.8 251 38.2
Lalb_Chr17g0347061 Lupinus albus HOM05D010487 ORTHO05D011788 8.4e-15 85.1 280 33.6
Lalb_Chr04g0250301 Lupinus albus HOM05D010487 ORTHO05D011788 1.4e-14 84.3 258 32.9
arahy.Tifrunner.gnm1.ann1.LNGA9N Arachis hypogaea HOM05D010487 ORTHO05D011788 1.6e-13 80.9 153 39.2
Phvul.001G248500 Phaseolus vulgaris HOM05D010487 ORTHO05D011788 1.3e-12 77.8 66 62.1
VMungo1383G3638 Vigna mungo HOM05D010487 ORTHO05D011788 1.8e-12 77.4 66 60.6
Medtr5g083840 Medicago truncatula HOM05D010487 ORTHO05D011788 2.3e-12 77.0 172 38.4
VMungo0647G0931 Vigna mungo HOM05D010487 ORTHO05D011788 8.7e-12 75.1 270 40.4
Glyma.02G259600 Glycine max HOM05D010487 ORTHO05D011788 5.7e-11 72.4 66 63.6
Psat2g024720 Pisum sativum HOM05D010487 ORTHO05D011788 6.3e-10 68.9 61 57.4
arahy.Tifrunner.gnm1.ann1.RT986S Arachis hypogaea HOM05D061439 ORTHO05D011788 2.6e-08 63.5 66 53.0
Glyma.18G021900 Glycine max HOM05D010487 ORTHO05D011788 2.2e-07 60.5 61 54.1
ClCG11G005820 Citrullus lanatus HOM05D022193 ORTHO05D010466 6.5e-07 58.9 63 50.8
Medtr3g072180 Medicago truncatula HOM05D039543 ORTHO05D011788 6.5e-07 58.9 52 61.5
TWI53G1543 Tripterygium wilfordii HOM05D009452 ORTHO05D010466 1.1e-06 58.2 61 50.8
TPR.G17176 Trifolium pratense HOM05D001363 ORTHO05D011788 2.5e-06 57.0 54 59.3
CSS0035018 Camellia sinensis var. sinensis HOM05D016735 ORTHO05D012140 4.2e-06 56.2 61 54.1
MELO3C019993.2 Cucumis melo HOM05D022193 ORTHO05D010466 4.2e-06 56.2 59 52.5
CsaV3_6G002160 Cucumis sativus L. HOM05D022193 ORTHO05D010466 5.5e-06 55.8 59 52.5
MSTRG.8364 Avicennia marina HOM05D013047 ORTHO05D012140 9.3e-06 55.1 69 50.7
Prupe.2G260200 Prunus persica HOM05D015621 ORTHO05D015549 9.3e-06 55.1 63 47.6
TPR.G31625 Trifolium pratense HOM05D039543 ORTHO05D011788 9.3e-06 55.1 67 55.2


User provided reference genes

Program Settings