Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00319g0018281 Lotus japonicus HOM05D011602 ORTHO05D011791 1.8e-30 135.2 64 100.0
CsaV3_UNG208380 Cucumis sativus L. HOM05D011602 ORTHO05D011791 1.6e-18 95.5 98 55.1
CiPaw.13G119500 Carya illinoinensis HOM05D011602 ORTHO05D011791 1.3e-17 92.4 98 54.1
Phvul.002G090588 Phaseolus vulgaris HOM05D011602 ORTHO05D011791 1.3e-17 92.4 104 52.9
arahy.Tifrunner.gnm1.ann1.ZJEP1E Arachis hypogaea HOM05D000963 ORTHO05D011791 1.1e-16 89.4 46 91.3
GSVIVG01010694001 Vitis vinifera HOM05D011602 ORTHO05D011791 1.1e-16 89.4 47 89.4
Gohir.D08G098025 Gossypium hirsutum HOM05D011602 ORTHO05D011791 5.6e-16 87.0 96 52.1
Gohir.A04G039331 Gossypium hirsutum HOM05D011602 ORTHO05D011791 7.3e-16 86.7 47 87.2
Gohir.A05G323756 Gossypium hirsutum HOM05D011602 ORTHO05D011791 7.3e-16 86.7 47 87.2
Gohir.D02G124566 Gossypium hirsutum HOM05D011602 ORTHO05D011791 2.1e-15 85.1 47 85.1
Migut.E00954 Erythranthe guttata HOM05D011602 ORTHO05D011791 3.1e-14 81.3 47 80.9
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.4e-13 77.8 49 75.5
SGA_v2.0_scaffold4G02445 Striga asiatica HOM05D011602 ORTHO05D011791 7.5e-13 76.6 47 80.9
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.0e-11 70.1 60 58.3
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.7e-10 68.2 60 55.0
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.3e-09 65.1 60 55.0
Migut.H02256 Erythranthe guttata HOM05D011602 ORTHO05D011791 7.3e-08 60.1 76 44.7
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.6e-07 58.9 36 77.8
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.8e-07 58.2 32 78.1
SGA_v2.0_scaffold125G33698 Striga asiatica HOM05D011602 ORTHO05D011791 6.2e-07 57.0 36 77.8
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.3e-06 55.1 32 78.1
SHI24929 Sapria himalayana HOM05D011602 ORTHO05D011791 6.8e-06 53.5 39 61.5


User provided reference genes

Program Settings