Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00319g0016523 Lotus japonicus HOM05D000963 ORTHO05D010073 1.8e-209 732.3 341 100.0
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.6e-96 356.3 324 61.7
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 7.4e-75 285.0 285 57.5
Medtr4g006070 Medicago truncatula HOM05D000963 ORTHO05D010073 1.8e-65 253.8 270 54.1
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.5e-63 245.4 327 50.5
arahy.Tifrunner.gnm1.ann1.XUX2EX Arachis hypogaea HOM05D000963 ORTHO05D004271 8.8e-60 235.0 219 60.7
Hma1.2p1_0431F.1_g151580 Hydrangea macrophylla HOM05D000963 ORTHO05D010073 1.6e-56 224.2 164 70.1
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 8.0e-53 211.8 284 47.9
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.0e-52 211.5 203 57.6
Migut.D01397 Erythranthe guttata HOM05D000963 ORTHO05D010201 7.0e-49 198.7 135 76.3
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 2.9e-47 193.4 149 67.8
arahy.Tifrunner.gnm1.ann1.AH21CB Arachis hypogaea HOM05D000963 ORTHO05D010658 1.5e-43 181.0 199 54.3
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 9.8e-43 178.3 205 52.2
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 3.3e-38 163.3 97 82.5
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 5.6e-38 162.5 144 63.2
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 4.7e-37 159.5 407 35.1
Migut.D01396 Erythranthe guttata HOM05D000963 ORTHO05D010073 1.3e-34 151.4 75 96.0
Lsat_1_v5_gn_6_94260 Lactuca sativa HOM05D000963 ORTHO05D010073 1.1e-33 148.3 70 100.0
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 1.2e-32 144.8 87 80.5
VMungo1383G1942 Vigna mungo HOM05D000963 ORTHO05D010073 3.0e-31 140.2 70 95.7
arahy.Tifrunner.gnm1.ann1.41YVYJ Arachis hypogaea HOM05D000963 ORTHO05D010201 7.3e-30 135.6 78 80.8
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 3.6e-29 133.3 81 80.2
Gohir.1Z056500 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.0e-28 131.7 81 79.0
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 1.2e-27 128.3 71 84.5
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 2.0e-27 127.5 108 63.0
Gohir.D04G096660 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.2e-24 118.2 81 71.6
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 6.0e-24 115.9 75 74.7
SEGI_01254 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 7.8e-24 115.5 87 65.5
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 1.3e-23 114.8 140 51.4
arahy.Tifrunner.gnm1.ann1.QZA5BL Arachis hypogaea HOM05D000963 ORTHO05D004715 6.6e-23 112.5 85 67.1
Gohir.1Z049892 Gossypium hirsutum HOM05D000963 ORTHO05D010073 6.6e-23 112.5 70 77.1
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 1.1e-22 111.7 52 96.2
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 2.8e-21 107.1 74 71.6
TPR.G38799 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-20 105.1 59 84.7
EL10Ac4g08799 Beta vulgaris HOM05D000963 ORTHO05D010073 3.1e-20 103.6 95 58.9
Migut.D01381 Erythranthe guttata HOM05D000963 ORTHO05D010073 6.8e-20 102.4 45 100.0
Lsat_1_v5_gn_4_147721 Lactuca sativa HOM05D000963 ORTHO05D010201 2.0e-19 100.9 50 92.0
Medtr1g039020 Medicago truncatula HOM05D000963 ORTHO05D010073 2.6e-19 100.5 45 97.8
Gorai.007G326100 Gossypium raimondii HOM05D000963 ORTHO05D010073 7.5e-19 99.0 72 72.2
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 4.9e-18 96.3 87 58.6
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 8.3e-18 95.5 194 39.2
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 8.3e-18 95.5 194 39.2
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.9e-17 94.4 87 58.6
Gorai.005G170500 Gossypium raimondii HOM05D000963 ORTHO05D010073 5.1e-15 86.3 45 84.4
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 8.6e-15 85.5 63 68.3
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 8.6e-15 85.5 63 68.3
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-14 85.1 72 63.9
Gorai.009G238500 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.2e-13 81.6 81 56.8
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 2.8e-13 80.5 61 73.8
Phvul.002G181700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 2.8e-13 80.5 81 56.8
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.6e-13 80.1 72 62.5
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 3.6e-13 80.1 72 62.5
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.6e-13 80.1 72 62.5
arahy.Tifrunner.gnm1.ann1.Q6P5E1 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.6e-13 80.1 72 62.5
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 3.6e-13 80.1 72 62.5
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 4.7e-13 79.7 50 80.0
arahy.Tifrunner.gnm1.ann1.00W2W5 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-12 78.2 44 84.1
arahy.Tifrunner.gnm1.ann1.KMV1WU Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-12 78.2 44 84.1
arahy.Tifrunner.gnm1.ann1.MEH7YS Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-12 78.2 72 61.1
arahy.Tifrunner.gnm1.ann1.P25ESR Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-12 78.2 44 84.1
arahy.Tifrunner.gnm1.ann1.R0HXDD Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-12 78.2 44 84.1
arahy.Tifrunner.gnm1.ann1.RJ0C0L Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-12 78.2 44 84.1
arahy.Tifrunner.gnm1.ann1.Z5J7KL Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-12 78.2 44 84.1
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 2.3e-12 77.4 130 42.3
TPR.G13983 Trifolium pratense HOM05D000963 ORTHO05D010073 2.3e-12 77.4 45 80.0
arahy.Tifrunner.gnm1.ann1.WQN88D Arachis hypogaea HOM05D000963 ORTHO05D010201 3.1e-12 77.0 50 72.0
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 4.0e-12 76.6 50 78.0
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 4.0e-12 76.6 50 78.0
Sopen07g011090 Solanum pennellii HOM05D000963 ORTHO05D004715 4.0e-12 76.6 35 97.1
arahy.Tifrunner.gnm1.ann1.7D98FQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.2e-11 75.1 35 97.1
arahy.Tifrunner.gnm1.ann1.U095GY Arachis hypogaea HOM05D000963 ORTHO05D004715 1.2e-11 75.1 35 97.1
Medtr7g012800 Medicago truncatula HOM05D000963 ORTHO05D004715 2.0e-11 74.3 54 72.2
arahy.Tifrunner.gnm1.ann1.BA1T4G Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-11 73.9 52 75.0
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 7.6e-11 72.4 53 69.8
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 7.6e-11 72.4 53 69.8
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 7.6e-11 72.4 53 69.8
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 7.6e-11 72.4 53 69.8
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 7.6e-11 72.4 53 69.8
Psat3g011600 Pisum sativum HOM05D000963 ORTHO05D010073 1.3e-10 71.6 93 50.5
unitig_91.g26526 Utricularia gibba HOM05D000963 ORTHO05D010073 1.3e-10 71.6 37 89.2
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-10 71.6 35 94.3
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-10 71.6 35 94.3
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-10 71.6 35 94.3
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-10 71.6 35 94.3
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-10 71.6 35 94.3
Oeu051749.1 Olea europaea HOM05D000963 ORTHO05D004715 1.7e-10 71.2 34 91.2
arahy.Tifrunner.gnm1.ann1.RYG47U Arachis hypogaea HOM05D008992 ORTHO05D002272 2.2e-10 70.9 31 100.0
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 3.8e-10 70.1 107 41.1
Nitab4.5_0003644g0060 Nicotiana tabacum HOM05D000963 ORTHO05D023713 8.4e-10 68.9 35 88.6
TPR.G7250 Trifolium pratense HOM05D000963 ORTHO05D026921 1.4e-09 68.2 34 88.2
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.2e-09 67.0 29 100.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 3.2e-09 67.0 29 100.0
FAN06G1734 Fragaria x ananassa HOM05D000963 ORTHO05D010073 3.2e-09 67.0 29 100.0
arahy.Tifrunner.gnm1.ann1.EF1F4B Arachis hypogaea HOM05D000963 ORTHO05D010073 9.2e-09 65.5 88 48.9
arahy.Tifrunner.gnm1.ann1.RWFL12 Arachis hypogaea HOM05D000729 ORTHO05D002596 9.2e-09 65.5 33 81.8
arahy.Tifrunner.gnm1.ann1.T2LG44 Arachis hypogaea HOM05D000963 ORTHO05D010073 9.2e-09 65.5 32 84.4
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.2e-08 65.1 47 68.1
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 4.6e-08 63.2 161 32.3
Migut.H02382 Erythranthe guttata HOM05D000963 ORTHO05D009823 7.8e-08 62.4 54 59.3
BolSC37t60801H Brassica oleracea HOM05D000963 ORTHO05D010073 1.0e-07 62.0 29 89.7
Psat1g063400 Pisum sativum HOM05D000963 ORTHO05D010201 1.0e-07 62.0 161 34.8
GSVIVG01023557001 Vitis vinifera HOM05D000092 ORTHO05D000042 3.9e-07 60.1 27 92.6
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 5.1e-07 59.7 63 55.6
Medtr4g122520 Medicago truncatula HOM05D000963 ORTHO05D010073 2.5e-06 57.4 28 89.3
VMungo1024G0003 Vigna mungo HOM05D009256 ORTHO05D011704 7.3e-06 55.8 171 33.3
Oeu016809.1 Olea europaea HOM05D000039 ORTHO05D005440 9.6e-06 55.5 24 91.7


User provided reference genes

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