Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 1.9e-41 172.2 91 100.0
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 1.9e-41 172.2 91 100.0
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 6.4e-34 147.1 92 88.0
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 1.4e-33 146.0 91 85.7
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 2.4e-33 145.2 92 87.0
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 5.5e-33 144.1 92 87.0
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 1.6e-32 142.5 91 82.4
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 84.6
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 6.0e-32 140.6 92 84.8
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 1.8e-31 139.0 91 80.2
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 2.3e-31 138.7 91 80.2
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 5.1e-31 137.5 89 84.3
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 8.7e-31 136.7 92 82.6
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.3e-30 134.8 88 83.0
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 3.3e-30 134.8 91 78.0
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 9.6e-30 133.3 91 79.1
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 9.6e-30 133.3 91 79.1
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 9.6e-30 133.3 94 80.9
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 2.8e-29 131.7 84 85.7
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 3.7e-29 131.3 91 78.0
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 3.7e-29 131.3 91 78.0
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 4.8e-29 131.0 80 88.8
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 6.2e-29 130.6 91 78.0
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 6.2e-29 130.6 91 78.0
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 6.2e-29 130.6 91 78.0
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 6.2e-29 130.6 91 78.0
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 6.2e-29 130.6 91 78.0
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 6.2e-29 130.6 91 78.0
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 6.2e-29 130.6 91 78.0
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 6.2e-29 130.6 91 78.0
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 1.1e-28 129.8 91 76.9
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-28 129.0 90 76.7
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-28 129.0 90 76.7
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-28 129.0 90 76.7
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-28 129.0 90 76.7
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-28 129.0 90 76.7
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-28 129.0 90 76.7
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 5.3e-28 127.5 85 78.8
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 9.0e-28 126.7 91 75.8
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 9.0e-28 126.7 80 83.8
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.2e-27 126.3 81 84.0
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 71.1
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 71.1
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 71.1
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 71.1
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-27 126.3 90 71.1
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 2.6e-27 125.2 88 70.5
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.6e-27 125.2 79 84.8
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.8e-27 124.0 88 71.6
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.3e-26 122.9 79 83.5
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 3.8e-26 121.3 79 82.3
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.5e-25 118.6 87 74.7
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 4.2e-25 117.9 79 82.3
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 5.5e-25 117.5 92 69.6
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 2.7e-24 115.2 77 76.6
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 6.0e-24 114.0 79 79.7
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.3e-23 112.8 78 70.5
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.3e-23 112.1 77 76.6
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 6.7e-23 110.5 73 75.3
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 1.9e-22 109.0 139 51.8
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 3.3e-22 108.2 82 65.9
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-21 106.3 72 79.2
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.2e-21 105.5 74 73.0
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 1.1e-20 103.2 75 73.3
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 1.8e-20 102.4 70 78.6
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 2.4e-20 102.1 77 70.1
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 6.9e-20 100.5 64 82.8
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 1.5e-19 99.4 69 76.8
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 2.0e-19 99.0 72 76.4
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 1.7e-18 95.9 60 81.7
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 5.0e-18 94.4 68 76.5
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 1.1e-17 93.2 61 82.0
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 1.9e-17 92.4 59 84.7
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 3.2e-17 91.7 68 76.5
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 7.2e-17 90.5 67 74.6
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 3.3e-14 81.6 66 66.7
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 3.3e-14 81.6 54 81.5
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 4.8e-13 77.8 60 65.0
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 5.3e-12 74.3 54 68.5
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 1.7e-10 69.3 45 80.0
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 3.8e-10 68.2 72 59.7
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-09 64.7 61 60.7
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 6.7e-07 57.4 74 41.9
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.7e-07 57.4 52 57.7
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 8.8e-07 57.0 73 41.1
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 1.1e-06 56.6 66 42.4
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 7.4e-06 53.9 68 41.2


User provided reference genes

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