Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00318g0002844 Lotus japonicus HOM05D000388 ORTHO05D009867 1.1e-29 132.5 63 100.0
Hund08562 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund18037 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund19305 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund19310 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund24074 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27447 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27567 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27603 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27661 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27704 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27749 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27758 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27800 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27845 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund27911 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28003 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28024 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28031 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28053 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28090 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28097 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28118 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28134 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28159 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28167 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28194 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28203 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28243 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28285 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28297 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28341 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28346 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28358 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28367 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28392 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28408 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28445 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28583 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28623 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28692 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund28726 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund29032 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund29058 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund29133 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund29412 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund29623 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund29676 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund29907 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund29949 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund30488 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Hund30628 Selenicereus undatus HOM05D000388 ORTHO05D009867 4.3e-21 104.0 63 82.5
Solyc00g500059.1 Solanum lycopersicum HOM05D000388 ORTHO05D009867 4.1e-19 97.4 84 60.7
Solyc00g500144.1 Solanum lycopersicum HOM05D000388 ORTHO05D009867 4.1e-19 97.4 84 60.7
Solyc00g500211.1 Solanum lycopersicum HOM05D000388 ORTHO05D009867 4.1e-19 97.4 84 60.7
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 5.3e-19 97.1 68 75.0
arahy.Tifrunner.gnm1.ann1.VJB3FT Arachis hypogaea HOM05D000388 ORTHO05D009867 9.0e-19 96.3 71 71.8
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 2.2e-17 91.7 53 81.1
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 1.9e-16 88.6 53 79.2
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 1.9e-16 88.6 53 79.2
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 1.9e-16 88.6 53 79.2
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 1.9e-16 88.6 53 79.2
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 1.9e-16 88.6 53 79.2
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 1.9e-16 88.6 53 79.2
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 1.9e-16 88.6 53 79.2
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 1.9e-16 88.6 53 79.2
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 1.9e-16 88.6 53 79.2
arahy.Tifrunner.gnm1.ann1.GGP979 Arachis hypogaea HOM05D031364 ORTHO05D009867 7.2e-16 86.7 52 80.8
EL10As1g23048 Beta vulgaris HOM05D000388 ORTHO05D009867 7.2e-16 86.7 42 95.2
Migut.D01352 Erythranthe guttata HOM05D000388 ORTHO05D009867 7.2e-16 86.7 41 97.6
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 7.2e-16 86.7 53 79.2
Nitab4.5_0006114g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009867 9.3e-16 86.3 41 95.1
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 9.3e-16 86.3 56 76.8
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 1.2e-15 85.9 56 75.0
Lsat_1_v5_gn_2_122100 Lactuca sativa HOM05D000388 ORTHO05D009867 2.1e-15 85.1 41 95.1
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 2.1e-15 85.1 41 95.1
Lsat_1_v5_gn_5_159900 Lactuca sativa HOM05D000388 ORTHO05D009867 2.1e-15 85.1 41 95.1
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 2.1e-15 85.1 41 95.1
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 2.1e-15 85.1 41 95.1
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 2.1e-15 85.1 41 95.1
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 2.1e-15 85.1 41 95.1
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 2.1e-15 85.1 41 95.1
Hund28251 Selenicereus undatus HOM05D000388 ORTHO05D009867 2.1e-15 85.1 41 95.1
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 6.1e-15 83.6 41 92.7
Gohir.A09G045400 Gossypium hirsutum HOM05D000388 ORTHO05D009867 6.1e-15 83.6 41 92.7
Gohir.A12G033000 Gossypium hirsutum HOM05D000388 ORTHO05D009867 6.1e-15 83.6 41 92.7
Gohir.D04G096448 Gossypium hirsutum HOM05D000388 ORTHO05D009867 6.1e-15 83.6 41 92.7
Gohir.D13G064033 Gossypium hirsutum HOM05D000388 ORTHO05D009867 6.1e-15 83.6 41 92.7
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 7.9e-15 83.2 56 75.0
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 7.9e-15 83.2 56 75.0
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.0e-14 82.8 56 71.4
BolC9t55816H Brassica oleracea HOM05D000388 ORTHO05D009867 2.3e-14 81.6 41 87.8
BolSC46t60992H Brassica oleracea HOM05D000388 ORTHO05D009867 2.3e-14 81.6 41 87.8
BolSC46t61043H Brassica oleracea HOM05D000388 ORTHO05D009867 2.3e-14 81.6 41 87.8
BolSC47t61118H Brassica oleracea HOM05D000388 ORTHO05D009867 2.3e-14 81.6 41 87.8
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 2.3e-14 81.6 41 87.8
Carub.0025s0002 Capsella rubella HOM05D000388 ORTHO05D009867 2.3e-14 81.6 41 87.8
Medtr0477s0040 Medicago truncatula HOM05D000388 ORTHO05D009867 2.3e-14 81.6 49 79.6
Medtr4g051213 Medicago truncatula HOM05D000388 ORTHO05D009867 2.3e-14 81.6 49 79.6
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 2.3e-14 81.6 56 73.2
Gohir.A07G163627 Gossypium hirsutum HOM05D000388 ORTHO05D009867 3.0e-14 81.3 41 90.2
Gohir.A12G044400 Gossypium hirsutum HOM05D000388 ORTHO05D009867 8.7e-14 79.7 41 90.2
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-13 79.0 41 90.2
ClCG07G007490 Citrullus lanatus HOM05D000388 ORTHO05D009867 3.3e-13 77.8 42 90.5
Gohir.D02G115550 Gossypium hirsutum HOM05D000388 ORTHO05D009867 3.3e-13 77.8 41 82.9
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 5.7e-13 77.0 41 87.8
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 7.4e-13 76.6 41 85.4
Gohir.D04G096708 Gossypium hirsutum HOM05D000388 ORTHO05D009867 1.6e-12 75.5 40 87.5
Solyc09g015340.3 Solanum lycopersicum HOM05D000388 ORTHO05D009867 1.6e-12 75.5 41 82.9
Medtr8g102790 Medicago truncatula HOM05D000388 ORTHO05D009867 2.2e-12 75.1 39 89.7
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 2.8e-12 74.7 41 85.4
Lalb_Chr06g0169301 Lupinus albus HOM05D000388 ORTHO05D009867 3.7e-12 74.3 39 87.2
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 3.7e-12 74.3 41 80.5
Lsat_1_v5_gn_7_15061 Lactuca sativa HOM05D000388 ORTHO05D009867 1.4e-11 72.4 40 85.0
arahy.Tifrunner.gnm1.ann1.MY7VXV Arachis hypogaea HOM05D000388 ORTHO05D009867 1.8e-11 72.0 35 94.3
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 1.8e-11 72.0 56 64.3
Phvul.004G150700 Phaseolus vulgaris HOM05D000388 ORTHO05D009867 6.9e-11 70.1 43 76.7
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 1.2e-10 69.3 53 66.0
MD00G1082800 Malus domestica HOM05D000388 ORTHO05D009867 5.5e-08 60.5 41 75.6
Medtr1g041800 Medicago truncatula HOM05D000388 ORTHO05D009867 1.2e-07 59.3 53 58.5
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 1.2e-07 59.3 52 57.7


User provided reference genes

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