Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 3.7e-64 248.1 125 100.0
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 1.4e-55 219.5 130 88.5
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 1.4e-55 219.5 130 88.5
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 9.4e-52 206.8 135 81.5
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 8.0e-51 203.8 135 80.7
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 2.3e-50 202.2 135 79.3
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 9.7e-49 196.8 135 76.3
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 2.2e-48 195.7 135 76.3
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.3e-48 194.1 135 76.3
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 1.8e-47 192.6 135 75.6
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 1.8e-47 192.6 135 75.6
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 3.1e-47 191.8 135 74.8
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 3.1e-47 191.8 135 74.8
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 3.1e-47 191.8 135 74.8
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 4.1e-47 191.4 135 74.8
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 4.1e-47 191.4 135 74.8
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 5.3e-47 191.0 135 74.1
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 1.2e-46 189.9 135 74.1
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 1.2e-46 189.9 135 74.1
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 1.2e-46 189.9 135 74.1
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 1.2e-46 189.9 135 74.1
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 1.2e-46 189.9 135 74.1
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 1.2e-46 189.9 135 74.1
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.2e-46 189.9 135 74.8
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 2.7e-46 188.7 135 74.8
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 3.5e-46 188.3 135 75.6
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 3.5e-46 188.3 135 75.6
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.5e-46 188.0 135 74.1
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 5.9e-46 187.6 135 73.3
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 7.7e-46 187.2 135 73.3
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 1.3e-45 186.4 135 73.3
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 1.3e-45 186.4 135 73.3
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 1.7e-45 186.0 131 75.6
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 2.9e-45 185.3 130 76.9
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-45 185.3 135 71.1
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-45 185.3 135 71.1
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-45 185.3 135 71.1
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-45 185.3 135 71.1
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-45 185.3 135 71.1
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-45 185.3 135 71.1
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-45 185.3 135 71.1
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 3.8e-45 184.9 135 72.6
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 2.7e-43 178.7 112 82.1
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 8.0e-43 177.2 104 86.5
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-42 176.0 135 67.4
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 1.5e-41 172.9 112 80.4
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 2.0e-41 172.6 112 80.4
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.0e-41 172.6 110 80.9
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.3e-40 167.2 129 71.3
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 1.1e-39 166.8 112 75.9
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.4e-39 165.6 114 77.2
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.4e-39 165.6 114 77.2
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 4.1e-39 164.9 141 65.2
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.5e-38 161.8 113 75.2
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 7.7e-38 160.6 118 71.2
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.3e-37 159.8 110 76.4
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 6.5e-37 157.5 99 79.8
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.1e-36 156.8 114 71.1
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-35 152.9 118 66.9
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 4.0e-34 148.3 112 69.6
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 4.0e-34 148.3 131 63.4
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 6.3e-32 141.0 135 57.0
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 1.1e-31 140.2 95 78.9
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 2.4e-31 139.0 94 78.7
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 1.2e-30 136.7 93 76.3
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 2.3e-29 132.5 90 75.6
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 3.8e-29 131.7 87 79.3
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 4.3e-28 128.3 82 81.7
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.2e-27 126.7 120 60.0
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.8e-26 122.9 91 70.3
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 6.8e-26 120.9 82 74.4
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 1.3e-24 116.7 70 85.7
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.1e-23 113.6 135 53.3
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 2.4e-23 112.5 71 81.7
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 3.5e-22 108.6 84 66.7
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.3e-21 105.9 135 51.1
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.6e-21 104.4 71 78.9
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.6e-19 99.8 102 55.9
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 3.6e-19 98.6 60 85.0
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.4e-18 96.7 58 84.5
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 4.4e-17 91.7 58 81.0
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 4.4e-17 91.7 58 81.0
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 4.4e-17 91.7 52 86.5
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 4.4e-17 91.7 134 40.3
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.7e-16 89.7 58 79.3
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 2.2e-16 89.4 93 52.7
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 2.9e-16 89.0 58 79.3
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 2.9e-16 89.0 53 86.8
FAN18G2960 Fragaria x ananassa HOM05D015635 ORTHO05D007162 2.9e-16 89.0 56 80.4
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 4.1e-15 85.1 55 78.2
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 9.2e-15 84.0 58 72.4
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 9.2e-15 84.0 58 72.4
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 9.2e-15 84.0 58 72.4
BraSC58t46502Z Brassica rapa HOM05D002824 ORTHO05D007162 6.0e-14 81.3 58 74.1
MELO3C033570.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.7e-13 79.7 60 73.3
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 2.3e-13 79.3 50 80.0
BraSC103t45484Z Brassica rapa HOM05D002824 ORTHO05D007162 5.1e-13 78.2 63 73.0
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 8.6e-13 77.4 49 81.6
SEGI_01834 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.6e-11 73.2 56 62.5
SEGI_02369 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.6e-11 73.2 56 62.5
SEGI_04931 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.6e-11 73.2 56 62.5
SEGI_09600 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.6e-11 73.2 56 62.5
SEGI_17120 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.6e-11 73.2 56 62.5
SEGI_22757 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.6e-11 73.2 56 62.5
SEGI_27642 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.6e-11 73.2 56 62.5
SEGI_30352 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 4.7e-11 71.6 56 60.7
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 8.1e-11 70.9 63 63.5
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-09 67.0 74 51.4
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 7.5e-09 64.3 42 78.6
BraSC143t45637Z Brassica rapa HOM05D002824 ORTHO05D007162 3.7e-08 62.0 39 82.1
ClCG10G008280 Citrullus lanatus HOM05D002824 ORTHO05D007162 1.2e-06 57.0 36 80.6
CSS0027777 Camellia sinensis var. sinensis HOM05D002824 ORTHO05D007162 7.8e-06 54.3 85 48.2


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