Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 1.9e-110 402.5 198 100.0
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 2.9e-95 352.1 214 87.4
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 2.9e-95 352.1 214 87.4
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 2.4e-94 349.0 214 86.9
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 4.5e-72 275.0 184 78.8
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 4.6e-69 265.0 154 87.0
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 3.3e-67 258.8 133 97.0
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 2.8e-66 255.8 132 94.7
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 8.1e-66 254.2 125 100.0
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 2.0e-64 249.6 123 99.2
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.3e-63 246.9 125 97.6
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.3e-63 246.9 125 97.6
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 2.2e-63 246.1 125 97.6
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 6.5e-63 244.6 125 96.8
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 3.5e-61 238.8 137 89.1
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 2.3e-60 236.1 147 83.7
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 2.3e-60 236.1 125 94.4
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.8e-58 229.2 146 81.5
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 1.2e-56 223.8 189 69.3
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.3e-55 220.3 124 87.1
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 6.1e-53 211.5 125 87.2
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 1.3e-50 203.8 155 72.3
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 6.3e-50 201.4 106 93.4
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 1.2e-48 197.2 99 99.0
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.0e-47 191.8 124 79.8
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.4e-46 190.3 103 93.2
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.2e-40 170.6 158 63.9
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.5e-40 170.2 95 87.4
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.6e-40 169.5 99 85.9
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 2.2e-39 166.4 136 66.9
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 9.4e-38 161.0 80 100.0
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 2.7e-37 159.5 85 94.1
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 7.9e-37 157.9 80 98.8
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 6.7e-36 154.8 89 87.6
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 6.7e-36 154.8 80 97.5
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 6.7e-36 154.8 80 97.5
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 8.8e-36 154.5 84 92.9
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 1.3e-34 150.6 80 95.0
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 2.2e-34 149.8 183 54.1
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 4.8e-34 148.7 83 86.7
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 8.2e-34 147.9 78 93.6
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.4e-33 147.1 89 85.4
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 3.6e-29 132.5 65 96.9
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 1.4e-28 130.6 91 71.4
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 3.0e-28 129.4 64 98.4
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 5.2e-28 128.6 88 78.4
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 1.3e-26 124.0 63 98.4
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 1.3e-26 124.0 63 98.4
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 1.3e-26 124.0 63 98.4
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 1.3e-26 124.0 63 98.4
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.2e-26 123.2 95 67.4
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 2.2e-26 123.2 63 98.4
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.7e-26 122.5 66 95.5
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 1.1e-25 120.9 184 47.3
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 1.4e-25 120.6 61 98.4
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 2.4e-25 119.8 72 87.5
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.2e-24 117.5 183 48.1
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 7.7e-24 114.8 56 100.0
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 5.0e-23 112.1 138 49.3
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 6.5e-23 111.7 101 63.4
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.5e-23 111.7 56 96.4
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 1.9e-22 110.2 55 98.2
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 4.2e-22 109.0 55 98.2
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 4.2e-22 109.0 55 98.2
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 2.1e-21 106.7 55 96.4
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 3.6e-21 105.9 53 98.1
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.8e-20 101.3 56 89.3
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 7.5e-19 98.2 118 51.7
Nitab4.5_0000859g0160 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.4e-17 93.2 81 59.3
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 1.0e-15 87.8 65 63.1
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 6.8e-12 75.1 63 61.9
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 2.2e-10 70.1 40 85.0
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 2.2e-10 70.1 36 91.7
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 6.3e-10 68.6 36 88.9
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 1.3e-07 60.8 38 78.9
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 5.0e-07 58.9 60 56.7
arahy.Tifrunner.gnm1.ann1.24DU69 Arachis hypogaea HOM05D000834 ORTHO05D000909 7.3e-06 55.1 31 83.9


User provided reference genes

Program Settings