Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 8.1e-76 287.0 142 100.0
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 6.7e-46 187.6 143 69.2
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 2.6e-45 185.7 135 71.9
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 4.2e-40 168.3 151 63.6
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 1.1e-37 160.2 130 65.4
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 1.3e-36 156.8 99 75.8
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 1.4e-35 153.3 142 54.9
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 2.4e-35 152.5 146 57.5
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 5.3e-35 151.4 98 72.4
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 7.0e-35 151.0 145 59.3
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 9.1e-35 150.6 131 58.0
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 1.6e-34 149.8 144 55.6
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 3.5e-34 148.7 99 70.7
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 3.8e-33 145.2 143 56.6
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 5.0e-33 144.8 123 61.8
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 1.1e-32 143.7 96 71.9
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 1.9e-32 142.9 157 51.0
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 1.9e-32 142.9 96 68.8
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 4.2e-32 141.7 142 56.3
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 9.4e-32 140.6 154 51.3
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.2e-31 140.2 157 50.3
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 1.6e-31 139.8 151 55.0
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 1.6e-31 139.8 144 50.0
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 2.1e-31 139.4 113 60.2
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 2.7e-31 139.0 150 57.3
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 6.1e-31 137.9 142 52.8
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 8.0e-31 137.5 95 68.4
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 1.0e-30 137.1 84 76.2
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 1.8e-30 136.3 144 54.2
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 1.8e-30 136.3 143 55.2
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 1.8e-30 136.3 98 68.4
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 2.3e-30 136.0 103 65.0
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 2.3e-30 136.0 128 63.3
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 3.0e-30 135.6 156 49.4
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 3.0e-30 135.6 97 64.9
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 3.0e-30 135.6 99 65.7
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 4.0e-30 135.2 99 67.7
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 4.0e-30 135.2 96 67.7
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 4.0e-30 135.2 99 63.6
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 6.7e-30 134.4 123 57.7
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 1.2e-29 133.7 145 52.4
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 1.5e-29 133.3 143 53.1
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 1.5e-29 133.3 89 71.9
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 2.6e-29 132.5 150 56.0
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 2.6e-29 132.5 90 70.0
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 2.6e-29 132.5 141 54.6
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 3.3e-29 132.1 146 53.4
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 3.3e-29 132.1 145 51.7
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 4.4e-29 131.7 143 51.7
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 4.4e-29 131.7 143 51.7
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 4.4e-29 131.7 143 51.7
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 4.4e-29 131.7 103 61.2
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 5.7e-29 131.3 91 67.0
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 7.5e-29 131.0 78 76.9
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 9.7e-29 130.6 96 65.6
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 1.7e-28 129.8 143 51.0
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 2.2e-28 129.4 148 50.0
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 1.1e-27 127.1 89 70.8
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 1.8e-27 126.3 78 71.8
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 4.1e-27 125.2 92 65.2
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 5.3e-27 124.8 95 67.4
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 7.0e-27 124.4 107 53.3
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 9.1e-27 124.0 129 55.0
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 1.2e-26 123.6 108 57.4
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 5.9e-26 121.3 114 52.6
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 5.0e-25 118.2 94 60.6
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 1.9e-24 116.3 132 52.3
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 1.2e-23 113.6 106 57.5
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 4.7e-23 111.7 92 64.1
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 8.0e-23 110.9 144 47.9
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.0e-22 110.5 84 65.5
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 1.8e-22 109.8 127 49.6
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 2.3e-22 109.4 96 60.4
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.3e-22 109.4 144 45.8
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 5.2e-22 108.2 81 64.2
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 6.8e-22 107.8 144 45.8
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 8.8e-22 107.5 85 63.5
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 2.6e-21 105.9 81 65.4
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 5.7e-21 104.8 104 52.9
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 7.5e-21 104.4 83 63.9
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.2e-20 102.8 145 45.5
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 1.6e-18 96.7 74 62.2
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 1.6e-18 96.7 74 62.2
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 4.5e-18 95.1 113 46.9
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 5.9e-18 94.7 69 68.1
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 3.8e-17 92.0 78 53.8
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 1.5e-16 90.1 128 45.3
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 1.9e-16 89.7 74 59.5
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 3.0e-14 82.4 87 51.7
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 1.5e-13 80.1 62 58.1
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 4.1e-11 72.0 93 46.2
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 2.9e-09 65.9 104 44.2
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 5.6e-08 61.6 134 37.3
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 7.3e-08 61.2 54 59.3
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 1.2e-07 60.5 100 40.0
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 2.8e-07 59.3 115 35.7
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 3.6e-07 58.9 97 41.2


User provided reference genes

Program Settings