Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.3e-199 699.5 355 100.0
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 9.2e-161 570.5 357 82.4
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 1.1e-156 557.0 357 81.2
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 3.0e-151 538.9 354 79.1
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 8.6e-151 537.3 356 78.4
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 5.6e-150 534.6 352 80.1
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 1.6e-149 533.1 356 78.1
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 1.6e-149 533.1 356 78.1
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 1.6e-149 533.1 356 78.1
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 1.6e-149 533.1 356 78.1
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 3.6e-149 531.9 356 77.8
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 3.1e-148 528.9 355 78.3
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 1.2e-147 526.9 354 77.1
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 2.0e-147 526.2 359 78.0
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 5.8e-147 524.6 353 78.8
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 1.9e-145 519.6 344 77.9
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 2.0e-123 446.4 354 65.8
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 2.0e-123 446.4 355 65.9
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 4.5e-123 445.3 354 66.4
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 9.9e-123 444.1 354 66.7
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 4.9e-122 441.8 355 64.8
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 3.2e-121 439.1 354 64.4
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.2e-120 437.2 355 64.8
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 4.6e-120 435.3 355 64.5
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 6.0e-120 434.9 355 65.6
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 7.9e-120 434.5 354 64.1
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 1.0e-119 434.1 354 64.1
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.1e-118 430.6 354 64.4
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 3.3e-118 429.1 355 63.9
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 2.1e-117 426.4 354 62.4
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 2.8e-117 426.0 370 62.4
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 4.8e-117 425.2 354 64.1
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 2.4e-116 422.9 369 61.8
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 1.2e-115 420.6 356 62.1
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 5.8e-115 418.3 350 63.7
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 7.6e-115 417.9 338 64.5
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 7.6e-115 417.9 355 64.2
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.3e-114 417.2 342 63.5
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 2.9e-114 416.0 354 61.9
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 8.4e-114 414.5 354 61.9
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 1.1e-113 414.1 354 61.3
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 2.5e-113 412.9 355 60.6
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 3.2e-113 412.5 356 61.5
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 2.1e-112 409.8 354 59.3
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 4.6e-112 408.7 357 61.9
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 1.8e-111 406.8 353 62.9
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 2.3e-111 406.4 358 60.6
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.5e-110 403.7 304 66.8
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 1.9e-110 403.3 354 59.6
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 3.3e-110 402.5 348 61.2
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 7.4e-110 401.4 357 58.5
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 9.7e-110 401.0 353 60.3
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 3.7e-109 399.1 342 61.1
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.8e-108 396.7 354 59.3
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 5.3e-108 395.2 354 59.9
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 3.4e-107 392.5 352 59.7
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.0e-106 391.0 353 59.2
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.3e-106 390.6 342 59.6
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 3.8e-106 389.0 357 58.0
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 5.0e-106 388.7 301 64.5
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 8.5e-106 387.9 346 59.8
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.2e-105 386.0 353 59.2
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 4.2e-105 385.6 359 57.7
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 4.2e-105 385.6 347 59.9
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 5.5e-105 385.2 370 57.8
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.6e-104 383.6 355 57.7
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 3.6e-104 382.5 342 59.4
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 3.6e-104 382.5 347 60.2
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 7.9e-104 381.3 351 57.5
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 1.8e-103 380.2 311 61.1
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 8.8e-103 377.9 315 61.6
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 9.7e-102 374.4 346 58.7
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 2.2e-101 373.2 355 56.6
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 8.2e-101 371.3 351 56.1
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 8.2e-101 371.3 301 60.5
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.1e-100 370.9 308 63.0
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 2.4e-100 369.8 355 55.8
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.6e-99 366.3 308 61.0
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.0e-98 364.4 306 61.4
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 8.5e-98 361.3 407 50.9
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 9.4e-97 357.8 315 59.7
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 2.6e-94 349.7 351 55.6
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 2.6e-94 349.7 312 59.9
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 3.3e-94 349.4 329 54.7
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 8.2e-93 344.7 368 51.4
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 3.2e-89 332.8 272 62.9
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 8.0e-88 328.2 270 63.7
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 5.2e-87 325.5 270 60.7
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 2.0e-86 323.6 302 57.9
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 5.7e-86 322.0 344 51.5
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 2.0e-83 313.5 347 51.6
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 3.8e-82 309.3 344 50.3
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 3.8e-82 309.3 351 47.6
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 4.4e-78 295.8 406 46.8
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 4.5e-75 285.8 271 54.6
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 5.5e-73 278.9 302 51.3
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 7.2e-73 278.5 353 45.9
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.8e-61 240.0 265 50.6
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.8e-55 220.7 362 37.8
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 4.1e-52 209.5 135 78.5
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-51 208.0 135 78.5
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-51 208.0 144 73.6
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 1.2e-51 208.0 217 53.5
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 2.0e-51 207.2 264 46.2
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 7.3e-49 198.7 186 55.4
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 1.5e-46 191.0 133 67.7
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 9.5e-41 171.8 184 50.5
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 1.8e-39 167.5 190 51.1
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 9.9e-38 161.8 122 65.6
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 2.4e-36 157.1 170 50.0
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 8.1e-32 142.1 104 72.1
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.8e-31 141.0 106 70.8
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.5e-25 121.3 251 33.5
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 3.2e-20 103.6 190 33.7
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 1.1e-15 88.6 61 75.4
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 2.4e-15 87.4 117 45.3
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 8.7e-10 68.9 56 60.7
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 6.9e-07 59.3 96 33.3


User provided reference genes

Program Settings