Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00201_ERROPOS200000g0014255 Lotus japonicus HOM05D000108 ORTHO05D237167 9.2e-68 260.0 123 100.0
Duzib205G0836 Durio zibethinus HOM05D000108 ORTHO05D007360 7.7e-14 80.9 103 43.7
Lj1g0024061 Lotus japonicus HOM05D000108 ORTHO05D007360 1.0e-13 80.5 102 44.1
arahy.Tifrunner.gnm1.ann1.8YW9LY Arachis hypogaea HOM05D000108 ORTHO05D007360 1.3e-13 80.1 102 44.1
arahy.Tifrunner.gnm1.ann1.RQV4MD Arachis hypogaea HOM05D000108 ORTHO05D007360 1.3e-13 80.1 102 44.1
Glyma.05G014900 Glycine max HOM05D000108 ORTHO05D007360 1.3e-13 80.1 102 44.1
Glyma.17G123400 Glycine max HOM05D000108 ORTHO05D007360 1.3e-13 80.1 102 44.1
MD14G1220100 Malus domestica HOM05D000108 ORTHO05D007360 1.3e-13 80.1 102 44.1
Phvul.003G179100 Phaseolus vulgaris HOM05D000108 ORTHO05D007360 1.3e-13 80.1 102 44.1
Hund09989 Selenicereus undatus HOM05D000108 ORTHO05D007360 1.3e-13 80.1 102 44.1
VMungo1215G2663 Vigna mungo HOM05D000108 ORTHO05D007360 1.3e-13 80.1 102 44.1
Atru.chr9.719 Acer truncatum HOM05D000108 ORTHO05D007360 1.7e-13 79.7 102 44.1
Lalb_Chr13g0302481 Lupinus albus HOM05D000108 ORTHO05D007360 1.7e-13 79.7 99 43.4
Glyma.04G145200 Glycine max HOM05D000108 ORTHO05D007360 2.2e-13 79.3 102 44.1
Actinidia18950 Actinidia chinensis HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
Aqoxy3G03871 Aquilegia oxysepala HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 44.1
CSS0001845 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
CSS0035005 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
ClCG06G015110 Citrullus lanatus HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
MELO3C017278.2 Cucumis melo HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
CsaV3_1G003530 Cucumis sativus L. HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
FvH4_5g12880 Fragaria vesca HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
FAN08G0432 Fragaria x ananassa HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
FAN18G1038 Fragaria x ananassa HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
FAN18G4051 Fragaria x ananassa HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
Lalb_Chr08g0231051 Lupinus albus HOM05D000108 ORTHO05D007360 2.9e-13 79.0 121 38.8
Manes.01G021900 Manihot esculenta HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
Prupe.5G214600 Prunus persica HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
RcHm_v2.0_Chr7g0184351 Rosa chinensis HOM05D000108 ORTHO05D007360 2.9e-13 79.0 102 43.1
SEGI_01672 Sequoiadendron giganteum HOM05D000108 ORTHO05D007360 2.9e-13 79.0 103 42.7
Eucgr.B00670 Eucalyptus grandis HOM05D000108 ORTHO05D007360 3.8e-13 78.6 102 43.1
HanXRQChr02g0045191 Helianthus annuus HOM05D000108 ORTHO05D007360 3.8e-13 78.6 121 38.0
Hma1.2p1_0340F.1_g130070 Hydrangea macrophylla HOM05D000108 ORTHO05D007360 3.8e-13 78.6 102 43.1
TAR371G0925 Trochodendron aralioides HOM05D000108 ORTHO05D007360 3.8e-13 78.6 102 43.1
CANSAT80G2756 Cannabis sativa HOM05D000108 ORTHO05D007360 5.0e-13 78.2 102 43.1
COL.COLO4_32193 Corchorus olitorius HOM05D000108 ORTHO05D007360 5.0e-13 78.2 102 43.1
Lj9A433T94 Lonicera japonica HOM05D000108 ORTHO05D007360 5.0e-13 78.2 102 43.1
Manes.05G117700 Manihot esculenta HOM05D000108 ORTHO05D007360 5.0e-13 78.2 102 43.1
DCAR_023143 Daucus carota HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 42.2
Dinv38602 Davidia involucrata HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
FAN13G2662 Fragaria x ananassa HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
Nn4g23675 Nelumbo nucifera HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 42.2
Nitab4.5_0000646g0040 Nicotiana tabacum HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
Nitab4.5_0004342g0010 Nicotiana tabacum HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
Peaxi162Scf00017g03028 Petunia axillaris HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
SHI18969 Sapria himalayana HOM05D000108 ORTHO05D007360 6.5e-13 77.8 121 38.0
Solyc03g114380.4 Solanum lycopersicum HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
PGSC0003DMG400024505 Solanum tuberosum HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
THA.LOC104813894 Tarenaya hassleriana HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
HPP92_008050 Vanilla planifolia HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 43.1
GSVIVG01008217001 Vitis vinifera HOM05D000108 ORTHO05D007360 6.5e-13 77.8 102 42.2
CAN.G781.6 Capsicum annuum HOM05D000108 ORTHO05D007360 8.5e-13 77.4 102 43.1
Gohir.A03G074500 Gossypium hirsutum HOM05D000108 ORTHO05D007360 8.5e-13 77.4 102 43.1
Gohir.D03G101000 Gossypium hirsutum HOM05D000108 ORTHO05D007360 8.5e-13 77.4 102 43.1
Gorai.003G106400 Gossypium raimondii HOM05D000108 ORTHO05D007360 8.5e-13 77.4 102 43.1
Lsat_1_v5_gn_1_15781 Lactuca sativa HOM05D000108 ORTHO05D007360 8.5e-13 77.4 102 43.1
Medtr2g055910 Medicago truncatula HOM05D000108 ORTHO05D007360 8.5e-13 77.4 102 42.2
TPR.G2787 Trifolium pratense HOM05D000108 ORTHO05D007360 8.5e-13 77.4 102 42.2
AUR62036931 Chenopodium quinoa HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 43.1
Ca_02525_v3 Cicer arietinum L. HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 42.2
ECA247G0190 Erigeron canadensis HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 43.1
PSO782G1149 Papaver somniferum HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 43.1
Phvul.009G201300 Phaseolus vulgaris HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 43.1
Psat1g027080 Pisum sativum HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 41.2
Rhsim12G0145300 Rhododendron simsii HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 42.2
Sabra12G0041600 Salix brachista HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 42.2
Thecc.03G115300 Theobroma cacao HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 42.2
vmacro16460 Vaccinium macrocarpon HOM05D000108 ORTHO05D007360 1.1e-12 77.0 102 42.2
Actinidia35070 Actinidia chinensis HOM05D000108 ORTHO05D007360 1.4e-12 76.6 102 43.1
ATR0598G301 Amborella trichopoda HOM05D000108 ORTHO05D007360 1.4e-12 76.6 102 43.1
CDE06G2749 Ceratophyllum demersum HOM05D000108 ORTHO05D007360 1.4e-12 76.6 102 42.2
Duzib084G0550 Durio zibethinus HOM05D000108 ORTHO05D007360 1.4e-12 76.6 102 42.2
QL10p022361 Quercus lobata HOM05D000108 ORTHO05D007360 1.4e-12 76.6 102 43.1
Sed0025810 Sechium edule HOM05D000108 ORTHO05D007360 1.4e-12 76.6 102 42.2
TWI81G0882 Tripterygium wilfordii HOM05D000108 ORTHO05D007360 1.4e-12 76.6 102 43.1
Ciclev10018952m.g Citrus clementina HOM05D000108 ORTHO05D007360 1.9e-12 76.3 102 42.2
Dinv36884 Davidia involucrata HOM05D000108 ORTHO05D007360 1.9e-12 76.3 102 42.2
Lj4g0001646 Lotus japonicus HOM05D000108 ORTHO05D007360 1.9e-12 76.3 102 42.2
PSO063G5633 Papaver somniferum HOM05D000108 ORTHO05D007360 1.9e-12 76.3 102 43.1
SMO367G0416 Selaginella moellendorffii HOM05D000108 ORTHO05D007360 1.9e-12 76.3 122 36.1
VMungo1309G1821 Vigna mungo HOM05D000108 ORTHO05D007360 1.9e-12 76.3 106 42.5
Aa31LG7G3240 Aethionema arabicum HOM05D000108 ORTHO05D007360 2.5e-12 75.9 102 41.2
AL1G30990 Arabidopsis lyrata HOM05D000108 ORTHO05D007360 2.5e-12 75.9 102 40.2
AT1G18550 Arabidopsis thaliana HOM05D000108 ORTHO05D007360 2.5e-12 75.9 102 40.2
Ca_07278_v3 Cicer arietinum L. HOM05D000108 ORTHO05D007360 2.5e-12 75.9 100 43.0
Ca_30295_v3 Cicer arietinum L. HOM05D000108 ORTHO05D007360 2.5e-12 75.9 100 43.0
Oeu024316.2 Olea europaea HOM05D000108 ORTHO05D007360 2.5e-12 75.9 102 42.2
Os01g0605500 Oryza sativa ssp. japonica HOM05D000108 ORTHO05D007360 2.5e-12 75.9 102 42.2
Psat4g043840 Pisum sativum HOM05D000108 ORTHO05D007360 2.5e-12 75.9 121 37.2
Potri.012G058400 Populus trichocarpa HOM05D000108 ORTHO05D007360 2.5e-12 75.9 102 41.2
Cfa019841 Carpinus fangiana HOM05D000108 ORTHO05D007360 3.2e-12 75.5 102 41.2
Sopen03g033480 Solanum pennellii HOM05D000108 ORTHO05D007360 3.2e-12 75.5 102 42.2
TWI15G0612 Tripterygium wilfordii HOM05D000108 ORTHO05D007360 3.2e-12 75.5 121 36.4
MSTRG.9270 Avicennia marina HOM05D000108 ORTHO05D007360 4.2e-12 75.1 121 36.4
AUR62032174 Chenopodium quinoa HOM05D000108 ORTHO05D007360 4.2e-12 75.1 101 42.6
Ca_02640_v3 Cicer arietinum L. HOM05D000108 ORTHO05D007360 4.2e-12 75.1 102 42.2
Medtr4g112350 Medicago truncatula HOM05D000108 ORTHO05D007360 4.2e-12 75.1 102 42.2
PGR083G0023 Punica granatum HOM05D000108 ORTHO05D007360 4.2e-12 75.1 102 39.2
Sp1g16500 Schrenkiella parvula HOM05D000108 ORTHO05D007360 5.5e-12 74.7 102 39.2
A06p14590 Brassica napus HOM05D000108 ORTHO05D007360 7.2e-12 74.3 102 39.2
BraA06t24586Z Brassica rapa HOM05D000108 ORTHO05D007360 7.2e-12 74.3 102 39.2
CARHR019170 Cardamine hirsuta HOM05D000108 ORTHO05D007360 7.2e-12 74.3 102 40.2
Cc04_g07690 Coffea canephora HOM05D000108 ORTHO05D007360 7.2e-12 74.3 102 41.2
Thhalv10006920m.g Eutrema salsugineum HOM05D000108 ORTHO05D007360 7.2e-12 74.3 102 39.2
Sc12g0006830 Simmondsia chinensis HOM05D000108 ORTHO05D007360 9.4e-12 73.9 102 40.2
Zm00001eb161550 Zea mays HOM05D000108 ORTHO05D007360 1.2e-11 73.6 98 41.8
C05p16820 Brassica napus HOM05D000108 ORTHO05D007360 1.6e-11 73.2 102 38.2
BolC5t30383H Brassica oleracea HOM05D000108 ORTHO05D007360 1.6e-11 73.2 102 38.2
SEGI_30510 Sequoiadendron giganteum HOM05D000108 ORTHO05D007360 1.6e-11 73.2 100 42.0
TPR.G20737 Trifolium pratense HOM05D000108 ORTHO05D007360 2.1e-11 72.8 99 42.4
Carub.0001s1818 Capsella rubella HOM05D000108 ORTHO05D007360 3.6e-11 72.0 102 39.2
Pp3c21_9290 Physcomitrium patens HOM05D000108 ORTHO05D007360 3.6e-11 72.0 103 41.7
Haze_18578 Corylus avellana HOM05D000108 ORTHO05D007360 6.1e-11 71.2 99 41.4
SEGI_37858 Sequoiadendron giganteum HOM05D000108 ORTHO05D007360 7.9e-11 70.9 110 37.3
Ca_18094_v3 Cicer arietinum L. HOM05D000108 ORTHO05D007360 1.4e-10 70.1 104 40.4
Ca_04010_v3 Cicer arietinum L. HOM05D000108 ORTHO05D007360 8.8e-10 67.4 59 57.6
Cpa.g.sc13.73 Carica papaya HOM05D000108 ORTHO05D007360 4.4e-09 65.1 46 63.0
Ca_02642_v3 Cicer arietinum L. HOM05D000108 ORTHO05D007360 9.7e-09 63.9 46 65.2
Mapoly0093s0013 Marchantia polymorpha HOM05D000108 ORTHO05D007360 1.3e-08 63.5 122 34.4
EL10Ac5g11234 Beta vulgaris HOM05D000108 ORTHO05D007360 2.8e-08 62.4 46 60.9


User provided reference genes

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