Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00131g0013150 Lotus japonicus HOM05D022449 ORTHO05D025770 0.0e+00 1466.4 852 100.0
LjContig00528g0023580 Lotus japonicus HOM05D022449 ORTHO05D025770 0.0e+00 1397.9 852 88.3
Lj1g0006605 Lotus japonicus HOM05D022449 ORTHO05D025770 0.0e+00 1090.9 867 72.4
Lj2g0014908 Lotus japonicus HOM05D022449 ORTHO05D025770 1.7e-206 723.8 668 65.7
Lj5g0003641 Lotus japonicus HOM05D022449 ORTHO05D025770 4.9e-68 263.8 237 62.0
Medtr1465s0010 Medicago truncatula HOM05D008107 ORTHO05D010019 2.6e-24 118.6 252 31.0
Medtr5g049460 Medicago truncatula HOM05D008107 ORTHO05D010019 5.7e-24 117.5 325 25.8
TPR.G32012 Trifolium pratense HOM05D021817 ORTHO05D010019 1.1e-22 113.2 335 24.8
Medtr0454s0020 Medicago truncatula HOM05D008107 ORTHO05D010019 9.1e-22 110.2 324 25.9
Medtr4g053915 Medicago truncatula HOM05D008107 ORTHO05D010019 2.0e-21 109.0 285 28.1
Medtr6g039060 Medicago truncatula HOM05D008107 ORTHO05D010019 2.7e-21 108.6 330 25.2
Medtr1g049020 Medicago truncatula HOM05D037930 ORTHO05D048905 3.5e-21 108.2 222 32.4
Medtr4g119430 Medicago truncatula HOM05D008107 ORTHO05D010019 7.7e-21 107.1 325 25.2
Medtr7g009270 Medicago truncatula HOM05D008107 ORTHO05D010019 7.7e-21 107.1 325 25.2
Medtr0387s0030 Medicago truncatula HOM05D008107 ORTHO05D010019 1.7e-20 105.9 296 27.7
Medtr1g082820 Medicago truncatula HOM05D037930 ORTHO05D048905 5.0e-20 104.4 222 32.0
Medtr3g048350 Medicago truncatula HOM05D008107 ORTHO05D010019 1.5e-19 102.8 285 27.4
Medtr6g052660 Medicago truncatula HOM05D008107 ORTHO05D010019 3.2e-19 101.7 325 24.3
Medtr6g047410 Medicago truncatula HOM05D008107 ORTHO05D010019 1.2e-18 99.8 325 24.3
Medtr0322s0040 Medicago truncatula HOM05D008107 ORTHO05D010019 1.6e-18 99.4 255 30.2
Medtr0195s0040 Medicago truncatula HOM05D008107 ORTHO05D010019 2.1e-18 99.0 325 24.0
Medtr0010s0130 Medicago truncatula HOM05D008107 ORTHO05D010019 8.0e-18 97.1 281 27.4
Medtr0752s0020 Medicago truncatula HOM05D008107 ORTHO05D010019 1.0e-17 96.7 256 28.1
Medtr0547s0010 Medicago truncatula HOM05D008107 ORTHO05D010019 3.4e-16 91.7 233 26.2
Medtr4g046907 Medicago truncatula HOM05D008107 ORTHO05D010019 3.4e-16 91.7 233 26.2
Psat7g078120 Pisum sativum HOM05D053456 ORTHO05D010019 1.7e-15 89.4 219 27.4
Medtr0015s0160 Medicago truncatula HOM05D008107 ORTHO05D010019 1.4e-14 86.3 284 25.7
Medtr0003s0350 Medicago truncatula HOM05D037930 ORTHO05D010019 3.1e-14 85.1 237 28.7
Medtr5g056860 Medicago truncatula HOM05D008107 ORTHO05D010019 5.4e-14 84.3 252 26.6
Medtr3g047490 Medicago truncatula HOM05D008107 ORTHO05D010019 7.0e-14 84.0 285 24.6
Ca_14369_v3 Cicer arietinum L. HOM05D009076 ORTHO05D011330 1.2e-13 83.2 262 27.5
Medtr7g024373 Medicago truncatula HOM05D008107 ORTHO05D010019 2.0e-13 82.4 285 24.2
Medtr0132s0050 Medicago truncatula HOM05D008107 ORTHO05D010019 2.7e-13 82.0 306 26.5
Medtr5g084777 Medicago truncatula HOM05D008107 ORTHO05D010019 4.5e-13 81.3 285 24.6
Medtr0133s0060 Medicago truncatula HOM05D008107 ORTHO05D010019 5.9e-13 80.9 285 24.2
Medtr5g459570 Medicago truncatula HOM05D008107 ORTHO05D010019 5.9e-13 80.9 285 24.2
Medtr6g033905 Medicago truncatula HOM05D008107 ORTHO05D010019 5.9e-13 80.9 292 23.6
Medtr6g471790 Medicago truncatula HOM05D008107 ORTHO05D010019 5.9e-13 80.9 285 24.2
Medtr8g012072 Medicago truncatula HOM05D008107 ORTHO05D010019 5.9e-13 80.9 285 24.2
Medtr8g087757 Medicago truncatula HOM05D008107 ORTHO05D010019 5.9e-13 80.9 285 24.2
Medtr6g049080 Medicago truncatula HOM05D008107 ORTHO05D010019 7.7e-13 80.5 175 29.7
Medtr3g436570 Medicago truncatula HOM05D008107 ORTHO05D010019 1.3e-12 79.7 285 23.9
TPR.G39685 Trifolium pratense HOM05D021817 ORTHO05D010019 1.7e-12 79.3 302 22.5
TPR.G2327 Trifolium pratense HOM05D008107 ORTHO05D010019 2.9e-12 78.6 285 24.2
Medtr1g053665 Medicago truncatula HOM05D008107 ORTHO05D010019 1.9e-11 75.9 190 28.9
Medtr7g099763 Medicago truncatula HOM05D008107 ORTHO05D010019 2.5e-11 75.5 255 24.7
Ca_23934_v3 Cicer arietinum L. HOM05D009076 ORTHO05D011330 7.3e-11 73.9 220 25.9
Medtr6g464050 Medicago truncatula HOM05D000092 ORTHO05D000042 2.1e-10 72.4 164 31.1
Medtr7g038780 Medicago truncatula HOM05D008107 ORTHO05D010019 2.8e-10 72.0 260 22.3
TPR.G20628 Trifolium pratense HOM05D008107 ORTHO05D010019 3.0e-09 68.6 245 24.9
Ca_20041_v3 Cicer arietinum L. HOM05D009076 ORTHO05D011330 6.8e-09 67.4 80 42.5
Medtr1g052035 Medicago truncatula HOM05D008107 ORTHO05D010019 6.8e-09 67.4 254 23.6
TPR.G10931 Trifolium pratense HOM05D008107 ORTHO05D010019 7.5e-08 63.9 58 43.1
TPR.G27575 Trifolium pratense HOM05D008107 ORTHO05D010019 2.9e-07 62.0 58 41.4
Lalb_Chr08g0232001 Lupinus albus HOM05D001572 ORTHO05D000733 6.4e-07 60.8 220 25.9
Medtr3g047110 Medicago truncatula HOM05D008107 ORTHO05D010019 3.2e-06 58.5 117 28.2
Medtr3g035410 Medicago truncatula HOM05D008107 ORTHO05D010019 4.1e-06 58.2 100 33.0


User provided reference genes

Program Settings