Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 0.0e+00 1431.0 725 100.0
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 0.0e+00 1414.1 725 98.9
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-160 570.5 370 81.1
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 6.8e-118 429.1 747 40.8
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 4.2e-59 233.8 425 36.0
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 2.8e-47 194.5 315 38.1
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-43 181.0 390 32.1
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 7.1e-43 179.9 369 33.6
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-42 179.1 695 27.8
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-42 178.3 370 31.4
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 4.6e-42 177.2 694 26.5
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 8.7e-41 172.9 727 27.9
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-40 171.8 341 35.5
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-40 171.8 379 32.5
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 9.7e-40 169.5 287 36.2
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-38 165.6 516 29.3
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-38 165.2 694 27.8
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 1.5e-37 162.2 384 33.1
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-36 159.5 326 30.4
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-36 157.9 690 26.7
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-33 148.7 315 32.4
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 3.9e-33 147.5 247 37.7
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-32 145.2 285 35.8
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-31 142.1 310 33.2
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 2.8e-31 141.4 267 34.8
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 8.2e-31 139.8 267 34.5
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-30 138.3 663 26.5
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 5.0e-28 130.6 575 24.3
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 9.4e-27 126.3 192 35.9
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-26 124.4 186 37.6
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 7.9e-26 123.2 247 33.2
Lj3g0028205 Lotus japonicus HOM05D008220 ORTHO05D010358 7.4e-24 116.7 506 26.7
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 4.8e-23 114.0 258 32.6
Lj2g0013073 Lotus japonicus HOM05D008220 ORTHO05D010358 7.0e-22 110.2 550 26.9
Lj1g0012808 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-21 108.2 167 38.3
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-20 106.3 122 44.3
Lj3g0003280 Lotus japonicus HOM05D008220 ORTHO05D010358 6.5e-20 103.6 308 29.5
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-19 102.8 608 25.3
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 1.5e-19 102.4 373 24.9
Lj5g0006780 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-19 102.1 267 30.7
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-19 101.3 157 36.9
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 5.5e-19 100.5 237 30.0
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 7.2e-19 100.1 350 24.9
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-18 99.4 337 24.3
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-18 97.8 337 24.3
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 5.7e-16 90.5 230 30.0
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-15 89.0 230 28.3
Lj1g0021549 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-14 86.3 176 31.8
Lj2g0023598 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-14 85.5 228 28.5
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 3.5e-13 81.3 180 34.4
Lj1g0024783 Lotus japonicus HOM05D008220 ORTHO05D010358 7.7e-13 80.1 198 30.3
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-11 75.1 408 23.5
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 5.5e-11 73.9 353 23.8
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-10 72.4 280 22.5
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.7e-10 71.6 378 22.2
Glyma.02G165100 Glycine max HOM05D002777 ORTHO05D001516 3.6e-10 71.2 402 22.9
Lj1g0022989 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-09 69.7 112 36.6
Lj5g0026451 Lotus japonicus HOM05D008220 ORTHO05D010358 3.0e-09 68.2 313 21.4
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.8e-09 67.0 85 38.8
Lj6g0001789 Lotus japonicus HOM05D019244 ORTHO05D010358 1.2e-08 66.2 138 31.9
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.0e-08 65.5 91 34.1
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.0e-08 65.5 367 20.2
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.6e-08 65.1 242 22.3
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.6e-08 65.1 275 22.2
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 7.5e-08 63.5 333 21.3
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.8e-08 63.2 358 20.7
Lj2g0005575 Lotus japonicus HOM05D002777 ORTHO05D001516 1.7e-07 62.4 410 21.0
Lj4g0004153 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-07 62.0 175 26.9
Atru.chr3.2350 Acer truncatum HOM05D016018 ORTHO05D017146 3.7e-07 61.2 432 23.4
Phvul.010G135050 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.7e-07 61.2 265 21.9
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.8e-07 60.8 307 20.5
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.3e-07 60.1 133 26.3
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.3e-07 60.1 93 35.5
Lj6g0008950 Lotus japonicus HOM05D019244 ORTHO05D036501 1.1e-06 59.7 79 35.4
LjContig00272g0003214 Lotus japonicus HOM05D019244 ORTHO05D036501 1.1e-06 59.7 79 35.4
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.4e-06 59.3 78 37.2
Lj4g0019865 Lotus japonicus HOM05D019244 ORTHO05D036501 1.8e-06 58.9 79 35.4
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 2.4e-06 58.5 113 27.4
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 3.1e-06 58.2 273 21.2
Lj5g0007202 Lotus japonicus HOM05D002777 ORTHO05D001516 3.1e-06 58.2 228 25.4
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.1e-06 58.2 78 33.3
DCAR_007691 Daucus carota HOM05D004122 ORTHO05D004468 4.1e-06 57.8 273 22.3
Lj2g0000461 Lotus japonicus HOM05D008220 ORTHO05D010358 4.1e-06 57.8 105 37.1
Lj2g0021049 Lotus japonicus HOM05D002777 ORTHO05D001516 4.1e-06 57.8 240 24.2
Lj4g0007213 Lotus japonicus HOM05D002777 ORTHO05D001516 4.1e-06 57.8 369 19.0
Sc20g0002870 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.1e-06 57.8 79 35.4
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.1e-06 57.8 267 23.6
EL10Ac7g17245 Beta vulgaris HOM05D008976 ORTHO05D011121 7.0e-06 57.0 369 21.1
ECA248G0911 Erigeron canadensis HOM05D000003 ORTHO05D011516 7.0e-06 57.0 305 22.0
Glyma.14G149800 Glycine max HOM05D002777 ORTHO05D001516 7.0e-06 57.0 226 23.9
Lj2g0018214 Lotus japonicus HOM05D002777 ORTHO05D001516 7.0e-06 57.0 139 23.7
Lj5g0027109 Lotus japonicus HOM05D002777 ORTHO05D001516 7.0e-06 57.0 234 23.9
Phvul.006G002800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.0e-06 57.0 381 23.1
Lj5g0019505 Lotus japonicus HOM05D002777 ORTHO05D001516 9.1e-06 56.6 257 22.2
Medtr5g065250 Medicago truncatula HOM05D002777 ORTHO05D001516 9.1e-06 56.6 324 21.3
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.1e-06 56.6 295 21.4
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 9.1e-06 56.6 147 27.9
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 9.1e-06 56.6 260 21.2


User provided reference genes

Program Settings