Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P89T23 Lonicera japonica HOM05D001070 ORTHO05D005132 1.3e-92 343.2 196 100.0
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 8.1e-50 201.1 120 90.8
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 3.2e-30 136.0 196 48.5
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 2.1e-29 133.3 178 52.2
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 1.9e-27 126.7 171 50.3
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.3e-26 124.0 193 47.2
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.3e-26 124.0 193 47.2
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.0e-25 119.0 187 47.1
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.9e-23 112.8 162 50.6
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.9e-20 102.4 198 41.9
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 8.7e-20 101.3 200 41.0
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 8.7e-20 101.3 200 41.0
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 8.7e-20 101.3 200 41.0
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 8.7e-20 101.3 200 41.0
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 9.7e-19 97.8 200 42.5
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.4e-17 93.2 207 38.6
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 5.9e-16 88.6 120 50.0
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.2e-14 82.8 166 42.2
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 4.2e-14 82.4 166 42.2
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 4.6e-13 79.0 195 41.0
GSVIVG01029921001 Vitis vinifera HOM05D001070 ORTHO05D005132 4.6e-13 79.0 113 53.1
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 3.0e-12 76.3 154 42.9
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.3e-11 72.4 108 44.4
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.3e-10 70.9 66 63.6
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 3.7e-10 69.3 219 31.1
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 3.7e-10 69.3 219 31.1
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 3.7e-10 69.3 219 31.1
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.7e-10 69.3 130 44.6
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 9.1e-09 64.7 208 32.7
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 2.0e-08 63.5 108 42.6
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 2.0e-08 63.5 140 37.9
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 7.7e-08 61.6 150 32.7
Medtr1g041530 Medicago truncatula HOM05D001070 ORTHO05D005132 1.7e-07 60.5 170 37.1
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 5.0e-07 58.9 93 49.5
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.4e-06 57.4 88 45.5
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 4.2e-06 55.8 192 38.5


User provided reference genes

Program Settings