Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 6.3e-193 677.6 419 100.0
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 6.7e-110 401.7 411 69.8
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 5.1e-94 349.0 385 67.0
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 1.1e-88 331.3 412 52.9
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 3.0e-86 323.2 412 44.9
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 1.4e-83 314.3 379 60.7
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 1.7e-81 307.4 348 67.2
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 2.5e-80 303.5 413 42.1
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 9.4e-80 301.6 379 59.9
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 3.3e-77 293.1 384 61.2
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 3.3e-77 293.1 384 61.2
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 5.7e-77 292.4 381 57.0
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 7.5e-77 292.0 405 58.5
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 1.1e-72 278.1 389 58.4
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 3.2e-72 276.6 398 53.0
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 1.2e-71 274.6 385 57.1
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 1.8e-70 270.8 377 40.3
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 1.2e-69 268.1 368 59.5
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 2.8e-68 263.5 408 53.4
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 3.7e-68 263.1 370 46.5
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 6.3e-68 262.3 378 59.3
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 8.3e-68 261.9 397 47.6
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 1.4e-67 261.2 371 58.0
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 1.4e-67 261.2 371 57.7
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 1.8e-67 260.8 389 50.9
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 2.4e-67 260.4 371 58.5
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 4.1e-67 259.6 389 51.4
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 7.0e-67 258.8 378 51.1
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 2.7e-66 256.9 377 53.8
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 1.7e-65 254.2 385 54.0
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 1.7e-65 254.2 389 49.4
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 1.9e-64 250.8 377 58.4
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 5.5e-64 249.2 368 40.5
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 1.0e-62 245.0 398 50.0
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 4.0e-62 243.0 368 45.1
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 6.8e-62 242.3 374 43.3
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 8.9e-62 241.9 382 52.6
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 4.4e-61 239.6 360 55.8
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 2.8e-60 236.9 376 52.4
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 3.7e-60 236.5 347 53.0
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 4.9e-60 236.1 375 54.9
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 6.3e-60 235.7 397 51.9
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 4.1e-59 233.0 369 45.8
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 4.5e-58 229.6 349 51.3
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 1.3e-57 228.0 384 39.1
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 1.7e-57 227.6 384 55.5
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 3.3e-56 223.4 377 53.1
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 1.0e-54 218.4 384 51.3
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 9.8e-53 211.8 368 49.5
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 1.1e-51 208.4 335 38.2
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 1.4e-51 208.0 379 52.8
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 1.2e-50 204.9 379 52.5
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 2.7e-50 203.8 373 53.1
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 4.6e-50 203.0 340 49.4
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 3.0e-49 200.3 373 50.1
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 3.3e-48 196.8 396 47.5
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 9.5e-48 195.3 370 49.2
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 1.6e-47 194.5 371 49.3
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 3.6e-47 193.4 372 51.9
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 2.0e-45 187.6 280 57.1
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 2.6e-45 187.2 371 48.5
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 4.9e-44 183.0 373 50.1
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 9.2e-43 178.7 289 55.0
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 7.8e-42 175.6 285 58.2
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 4.3e-40 169.9 215 45.1
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 5.6e-40 169.5 370 49.7
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 4.7e-39 166.4 383 31.9
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 2.0e-37 161.0 292 55.5
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 1.9e-35 154.5 273 35.2
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 4.1e-35 153.3 378 29.4
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 5.4e-35 152.9 381 28.9
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 5.4e-35 152.9 381 28.9
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 3.0e-33 147.1 290 52.1
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 7.3e-32 142.5 381 28.6
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 2.1e-31 141.0 261 54.8
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 6.0e-26 122.9 359 46.5
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 3.3e-24 117.1 311 27.0
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 7.3e-24 115.9 405 25.7
CAN.G6574.1 Capsicum annuum HOM05D007884 ORTHO05D009968 4.7e-23 113.2 241 58.9
SEGI_26452 Sequoiadendron giganteum HOM05D007884 ORTHO05D009968 6.4e-12 76.3 401 38.4
ATR0665G502 Amborella trichopoda HOM05D000424 ORTHO05D008586 8.7e-09 65.9 219 25.6
Hund17562 Selenicereus undatus HOM05D007884 ORTHO05D009968 1.3e-07 62.0 57 50.9


User provided reference genes

Program Settings